BLASTX nr result

ID: Coptis25_contig00003305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003305
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634798.1| PREDICTED: putative disease resistance prote...    74   1e-11
emb|CBI21729.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_003604979.1| NBS-containing resistance-like protein [Medi...    73   2e-11
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...    73   3e-11
ref|XP_002269044.2| PREDICTED: putative disease resistance prote...    72   5e-11

>ref|XP_003634798.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1300

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/75 (52%), Positives = 49/75 (65%)
 Frame = -2

Query: 227 LRYLDLSYTRLKELPETVRSLVNLETLKLNECYHLCKLPEGIGELSNLRHLEVEYTYDLK 48
           LRYLDLSY   K LP  +  L NL+TLKL  C  L  +P+ IGEL NLRHLE +  Y+L 
Sbjct: 584 LRYLDLSYNEFKVLPNAITRLKNLQTLKLTSCKRLKGIPDNIGELINLRHLENDSCYNLA 643

Query: 47  YYPRGGIERLSQLRT 3
           + P  GI +L+ LR+
Sbjct: 644 HMPH-GIGKLTLLRS 657


>emb|CBI21729.3| unnamed protein product [Vitis vinifera]
          Length = 1413

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/75 (52%), Positives = 49/75 (65%)
 Frame = -2

Query: 227 LRYLDLSYTRLKELPETVRSLVNLETLKLNECYHLCKLPEGIGELSNLRHLEVEYTYDLK 48
           LRYLDLSY   K LP  +  L NL+TLKL  C  L  +P+ IGEL NLRHLE +  Y+L 
Sbjct: 587 LRYLDLSYNEFKVLPNAITRLKNLQTLKLTSCKRLKGIPDNIGELINLRHLENDSCYNLA 646

Query: 47  YYPRGGIERLSQLRT 3
           + P  GI +L+ LR+
Sbjct: 647 HMPH-GIGKLTLLRS 660


>ref|XP_003604979.1| NBS-containing resistance-like protein [Medicago truncatula]
           gi|355506034|gb|AES87176.1| NBS-containing
           resistance-like protein [Medicago truncatula]
          Length = 1024

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = -2

Query: 227 LRYLDLSYTRL-KELPETVRSLVNLETLKLNECYHLCKLPEGIGELSNLRHLEVEYTYDL 51
           LRYLDLSY R+ +ELP ++  LVNLETL LN C HL +LP+ + +   LRHLE++Y  DL
Sbjct: 596 LRYLDLSYCRMVEELPRSITDLVNLETLLLNWCTHLKELPKDLWKWVRLRHLELDYCDDL 655

Query: 50  KYYPRGGIERLSQLRT 3
              PR GI +++ L+T
Sbjct: 656 TSMPR-GIGKMTNLQT 670


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542676|gb|EEF44213.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/74 (52%), Positives = 52/74 (70%)
 Frame = -2

Query: 227 LRYLDLSYTRLKELPETVRSLVNLETLKLNECYHLCKLPEGIGELSNLRHLEVEYTYDLK 48
           LR+L+LS   L+ELP T+ +L NL+TL L+ C  L +LP G+G+L NLRHL +  T  L 
Sbjct: 616 LRWLNLSKLDLEELPNTLSNLYNLQTLNLDRCKRLQRLPGGLGKLKNLRHLNLRETDCLN 675

Query: 47  YYPRGGIERLSQLR 6
            +P+ GIERLS LR
Sbjct: 676 IFPQ-GIERLSNLR 688


>ref|XP_002269044.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 919

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = -2

Query: 227 LRYLDLSYTR-LKELPETVRSLVNLETLKLNECYHLCKLPEGIGELSNLRHLEVEYTYDL 51
           LRYLDLS  + L+ELPET+  L NL+TL +  C  L KLP+ +G+L NLRHLE  YT  L
Sbjct: 602 LRYLDLSRCQSLRELPETICDLYNLQTLNIQYCISLQKLPQAMGKLINLRHLE-NYTRSL 660

Query: 50  KYYPRGGIERLSQLRT 3
           K  P+ GI RLS L+T
Sbjct: 661 KGLPK-GIGRLSSLQT 675


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