BLASTX nr result

ID: Coptis25_contig00003292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003292
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336061.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002298641.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_003622132.1| Amino acid binding protein, putative [Medica...   172   5e-41
ref|XP_003622131.1| Amino acid binding protein, putative [Medica...   172   5e-41
ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818...   170   2e-40

>ref|XP_002336061.1| predicted protein [Populus trichocarpa] gi|222869846|gb|EEF06977.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  181 bits (458), Expect = 2e-43
 Identities = 92/123 (74%), Positives = 105/123 (85%), Gaps = 2/123 (1%)
 Frame = +1

Query: 4   QCLEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHV 183
           QCLEAAI+RRASEGLELELCTEDR+GLLSDITRIFRENSL I+RAEI TK GKA DTF+V
Sbjct: 317 QCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKGGKAKDTFYV 376

Query: 184 TDVSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR--RSIR 357
           TDV+GN V+PK +DSICRQIGQT L VKRNS  +PK  QET  G++FGNLFK R  + IR
Sbjct: 377 TDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETTMGYIFGNLFKARTFKLIR 436

Query: 358 TYT 366
           +Y+
Sbjct: 437 SYS 439


>ref|XP_002298641.1| predicted protein [Populus trichocarpa] gi|222845899|gb|EEE83446.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  181 bits (458), Expect = 2e-43
 Identities = 92/123 (74%), Positives = 105/123 (85%), Gaps = 2/123 (1%)
 Frame = +1

Query: 4   QCLEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHV 183
           QCLEAAI+RRASEGLELELCTEDR+GLLSDITRIFRENSL I+RAEI TK GKA DTF+V
Sbjct: 319 QCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKGGKAKDTFYV 378

Query: 184 TDVSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR--RSIR 357
           TDV+GN V+PK +DSICRQIGQT L VKRNS  +PK  QET  G++FGNLFK R  + IR
Sbjct: 379 TDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETTMGYIFGNLFKARTFKLIR 438

Query: 358 TYT 366
           +Y+
Sbjct: 439 SYS 441


>ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
           gi|355497147|gb|AES78350.1| Amino acid binding protein,
           putative [Medicago truncatula]
          Length = 475

 Score =  172 bits (436), Expect = 5e-41
 Identities = 88/126 (69%), Positives = 105/126 (83%), Gaps = 5/126 (3%)
 Frame = +1

Query: 4   QCLEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHV 183
           QCLEAAI+RRASEG+ELELCTEDR+GLLSDITRIFRENSL I+RAEIST+ GKA DTF+V
Sbjct: 350 QCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYV 409

Query: 184 TDVSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR-----R 348
           TDV+GN V+PK++DSI RQIG T+L+VK NSS +PK  Q T  GFLFG+ FK R     +
Sbjct: 410 TDVTGNPVDPKSIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIGFLFGSFFKARSFQNFK 469

Query: 349 SIRTYT 366
            IR+Y+
Sbjct: 470 LIRSYS 475


>ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
           gi|355497146|gb|AES78349.1| Amino acid binding protein,
           putative [Medicago truncatula]
          Length = 442

 Score =  172 bits (436), Expect = 5e-41
 Identities = 88/126 (69%), Positives = 105/126 (83%), Gaps = 5/126 (3%)
 Frame = +1

Query: 4   QCLEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHV 183
           QCLEAAI+RRASEG+ELELCTEDR+GLLSDITRIFRENSL I+RAEIST+ GKA DTF+V
Sbjct: 317 QCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYV 376

Query: 184 TDVSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR-----R 348
           TDV+GN V+PK++DSI RQIG T+L+VK NSS +PK  Q T  GFLFG+ FK R     +
Sbjct: 377 TDVTGNPVDPKSIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIGFLFGSFFKARSFQNFK 436

Query: 349 SIRTYT 366
            IR+Y+
Sbjct: 437 LIRSYS 442


>ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
          Length = 445

 Score =  170 bits (431), Expect = 2e-40
 Identities = 87/126 (69%), Positives = 102/126 (80%), Gaps = 5/126 (3%)
 Frame = +1

Query: 4   QCLEAAIQRRASEGLELELCTEDRIGLLSDITRIFRENSLSIRRAEISTKAGKAIDTFHV 183
           QCLEAAI+RRASEG+ELELCTEDR+GLLSDITRIFRENSL I+RAEIST+ GKA DTF+V
Sbjct: 320 QCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTEEGKARDTFYV 379

Query: 184 TDVSGNAVEPKTVDSICRQIGQTILKVKRNSSFTPKSQQETASGFLFGNLFKPR-----R 348
           TDV+GN V+PK +DSI RQIG  +LKVK NS+ +PK  Q T  GFL GN FK R     +
Sbjct: 380 TDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPSQPTTIGFLLGNFFKARSFQNFK 439

Query: 349 SIRTYT 366
            IR+Y+
Sbjct: 440 LIRSYS 445


Top