BLASTX nr result

ID: Coptis25_contig00003288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003288
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311304.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003613808.1| Beta-1,3-galactosyltransferase [Medicago tru...    96   3e-18
ref|XP_002269607.1| PREDICTED: beta-1,3-galactosyltransferase 15...    93   2e-17
ref|XP_002316134.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003518733.1| PREDICTED: beta-1,3-galactosyltransferase 15...    88   8e-16

>ref|XP_002311304.1| predicted protein [Populus trichocarpa] gi|222851124|gb|EEE88671.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/69 (66%), Positives = 57/69 (82%)
 Frame = +2

Query: 2   NSSLVFSTDILVSNLFTRRNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGVAWN 181
           NSS VFSTD +VS+LF  RN S+EE ++LQTWN L+HLI HA+VL N +EAIKEAG AW+
Sbjct: 59  NSSQVFSTDTIVSSLFALRNISNEEQKSLQTWNLLKHLIDHAQVLSNGVEAIKEAGNAWS 118

Query: 182 SLMTSVEEQ 208
           SLM S+EE+
Sbjct: 119 SLMASIEEE 127


>ref|XP_003613808.1| Beta-1,3-galactosyltransferase [Medicago truncatula]
           gi|355515143|gb|AES96766.1|
           Beta-1,3-galactosyltransferase [Medicago truncatula]
          Length = 639

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/68 (67%), Positives = 55/68 (80%)
 Frame = +2

Query: 5   SSLVFSTDILVSNLFTRRNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGVAWNS 184
           +S V S DILVS+LF R NFS +E +TLQTWNHL+HLI H + LP+A EAIKEA  AWNS
Sbjct: 65  TSQVISADILVSSLFARNNFSKQEQQTLQTWNHLKHLIDHVQGLPSATEAIKEAASAWNS 124

Query: 185 LMTSVEEQ 208
           L++SVEEQ
Sbjct: 125 LVSSVEEQ 132


>ref|XP_002269607.1| PREDICTED: beta-1,3-galactosyltransferase 15 [Vitis vinifera]
           gi|296086360|emb|CBI31949.3| unnamed protein product
           [Vitis vinifera]
          Length = 636

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/69 (62%), Positives = 56/69 (81%)
 Frame = +2

Query: 2   NSSLVFSTDILVSNLFTRRNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGVAWN 181
           N+S V S D +VS+LF  RN S EE ++L TW+HL++LI HA+VLPNA+EAIKEAG+AW 
Sbjct: 61  NASQVISADSIVSSLFGLRNISDEEQQSLHTWDHLKYLINHAQVLPNALEAIKEAGIAWT 120

Query: 182 SLMTSVEEQ 208
           SL+ SVEE+
Sbjct: 121 SLLASVEEE 129


>ref|XP_002316134.1| predicted protein [Populus trichocarpa] gi|222865174|gb|EEF02305.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/68 (64%), Positives = 55/68 (80%)
 Frame = +2

Query: 5   SSLVFSTDILVSNLFTRRNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGVAWNS 184
           SS VFSTD +VS+LF  RN S+EE+++LQTWN L+HLI HA+V  N +EAIKEAG AW+S
Sbjct: 61  SSQVFSTDTIVSSLFAPRNISNEEHKSLQTWNLLKHLIDHAQVFANGVEAIKEAGNAWSS 120

Query: 185 LMTSVEEQ 208
           LM S EE+
Sbjct: 121 LMASAEEE 128


>ref|XP_003518733.1| PREDICTED: beta-1,3-galactosyltransferase 15-like [Glycine max]
          Length = 639

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/67 (64%), Positives = 51/67 (76%)
 Frame = +2

Query: 8   SLVFSTDILVSNLFTRRNFSSEENRTLQTWNHLEHLIGHAKVLPNAIEAIKEAGVAWNSL 187
           S V S+DILVS+LFT  NFS EE + LQTWN L HLI + + LPNA EAIKEA  AWNS 
Sbjct: 67  SQVISSDILVSSLFTGSNFSKEEQQALQTWNQLNHLIDNVQGLPNAAEAIKEAASAWNSF 126

Query: 188 MTSVEEQ 208
           ++S+EEQ
Sbjct: 127 ISSIEEQ 133


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