BLASTX nr result

ID: Coptis25_contig00003281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003281
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272987.2| PREDICTED: uncharacterized protein At5g41620...   103   3e-20
emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]   100   4e-19
ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620...    97   3e-18
emb|CAN83521.1| hypothetical protein VITISV_019055 [Vitis vinifera]    97   3e-18
ref|XP_003521480.1| PREDICTED: uncharacterized protein At5g41620...    97   3e-18

>ref|XP_002272987.2| PREDICTED: uncharacterized protein At5g41620-like [Vitis vinifera]
          Length = 616

 Score =  103 bits (257), Expect = 3e-20
 Identities = 52/114 (45%), Positives = 80/114 (70%), Gaps = 3/114 (2%)
 Frame = +1

Query: 16  SEEDQRRLSGDKEIKGRKPTSGKMTRGRISLERCTSDGIEWDFSTGNFARD---GYDQET 186
           +++D  R+S D+EI+GRKPTSGK+  G ISLER TS+G+EWDF   N +++    +D+  
Sbjct: 465 AQDDSNRVSVDREIRGRKPTSGKIQWGNISLERVTSNGMEWDFD--NISQENSYAFDKGR 522

Query: 187 YSKTEKQAHGKNRDIEKQRYKSIKDLRDYILSNSRLAPAHGFASPTKQWG*PNP 348
             + + +A  K+ + E +RYKS+K LRD+ILS S+++   GFASPT++W   +P
Sbjct: 523 TPEHDSEARRKDYEDEIKRYKSVKGLRDHILSGSKVSSIQGFASPTRKWEQASP 576


>emb|CAN66060.1| hypothetical protein VITISV_017038 [Vitis vinifera]
          Length = 577

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
 Frame = +1

Query: 13  ISEEDQRRLSGDKEIKGRKPTSGKMTRGRISLERCTSDGIEWDFSTGNF--ARDGYDQET 186
           +S + ++    ++EI+ RK TSGKM+R   SL+R  SDGI+W   + N   +RDG D   
Sbjct: 425 VSRDXRKVPIDEEEIRVRKSTSGKMSRRSTSLQRSMSDGIDWGIQSENLQSSRDGLDWGR 484

Query: 187 YSKTEKQAHGKNRDIEKQRYKSIKDLRDYILSNSRLAPAHGFASPTKQWG 336
           + + EK+A GK    E QRYKS+K LRD IL+ SR+  A  FASPT+QWG
Sbjct: 485 FYELEKEAQGKGYGDEMQRYKSVKGLRDQILAGSRIGSARVFASPTRQWG 534


>ref|XP_002275906.2| PREDICTED: uncharacterized protein At5g41620-like [Vitis vinifera]
          Length = 693

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 50/99 (50%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
 Frame = +1

Query: 46  DKEIKGRKPTSGKMTRGRISLERCTSDGIEWDFSTGNF--ARDGYDQETYSKTEKQAHGK 219
           ++E + RK TSGKM+R   SL+R  SDGI+W   + N   +RDG D   + + EK+A GK
Sbjct: 517 EEETRVRKSTSGKMSRRSTSLQRSMSDGIDWGIQSENLQSSRDGLDWGRFYELEKEAQGK 576

Query: 220 NRDIEKQRYKSIKDLRDYILSNSRLAPAHGFASPTKQWG 336
               E QRYKS+K LRD IL+ SR+  A  FASPT+QWG
Sbjct: 577 GYGDEMQRYKSVKGLRDQILAGSRIGSARVFASPTRQWG 615


>emb|CAN83521.1| hypothetical protein VITISV_019055 [Vitis vinifera]
          Length = 629

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 50/106 (47%), Positives = 74/106 (69%), Gaps = 3/106 (2%)
 Frame = +1

Query: 40  SGDKEIKGRKPTSGKMTRGRISLERCTSDGIEWDFSTGNFARD---GYDQETYSKTEKQA 210
           S D+EI+GRKPTSGK+  G ISLER TS+G+EWDF   N +++    +D+    + + +A
Sbjct: 496 SVDREIRGRKPTSGKIQWGNISLERVTSNGMEWDFD--NISQENSYAFDKGRTPEHDSEA 553

Query: 211 HGKNRDIEKQRYKSIKDLRDYILSNSRLAPAHGFASPTKQWG*PNP 348
             K+ + E +RYKS+K LRD+ILS S+++   GFASPT++W   +P
Sbjct: 554 RRKDYEDEIKRYKSVKGLRDHILSGSKVSSIQGFASPTRKWEQASP 599


>ref|XP_003521480.1| PREDICTED: uncharacterized protein At5g41620-like [Glycine max]
          Length = 660

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 55/119 (46%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
 Frame = +1

Query: 16  SEEDQRRLSGDKEIKG-RKPTSGKMTRGRISLERCTSDGIEWDFSTGNFAR--DGYDQET 186
           S  D RR   ++E+KG R+ TSGK +R   SL+R  SDG+EW           DG D E+
Sbjct: 508 SRFDTRRYPIEEEVKGSRRSTSGKASRKSTSLQRSISDGMEWGVQADKIQNSGDGIDWES 567

Query: 187 YSKTEKQAHGKNRDIEKQRYKSIKDLRDYILSNSRLAPAHGFASPTKQWG*PNPGKALS 363
           + + EKQA GK    E Q YKS+K LRD IL+ SRLA + G+ASPT+Q+  P P + L+
Sbjct: 568 FYELEKQAQGKGYADEMQGYKSVKGLRDQILAGSRLASSRGYASPTRQFSQPWPSRDLA 626


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