BLASTX nr result

ID: Coptis25_contig00003270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003270
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    62   9e-08
emb|CBI37809.3| unnamed protein product [Vitis vinifera]               61   2e-07
gb|AFK36768.1| unknown [Lotus japonicus]                               59   1e-06
ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805...    57   3e-06
ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800...    56   5e-06

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
 Frame = -3

Query: 524 YTLWILKHLGDGTISFMA*ALA*GYRKENWIKVQADLLVELSCFKNEYVKMFS----VRG 357
           Y + +     DG   F   A A G  +E W +V+ D+L EL  + +EY ++F     V  
Sbjct: 582 YIMHVKDVAADGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWDEYAQLFRDPIRVDE 641

Query: 356 FENCEKNFKKSGK-DECMELPQSGYLVASKYHDIVVFFSKAKSATFLPLRSA-LPENGPK 183
             +  ++F+     D  M +P  G+++AS+Y+ ++V+ S     TFLPLRSA  P    +
Sbjct: 642 LIHXLEHFQSPADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAPTPLPMRR 701

Query: 182 VISIG 168
           V+SIG
Sbjct: 702 VLSIG 706


>emb|CBI37809.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
 Frame = -3

Query: 524 YTLWILKHLGDGTISFMA*ALA*GYRKENWIKVQADLLVELSCFKNEYVKMFS----VRG 357
           Y + +     DG   F   A A G  +E W +V+ D+L EL  +  EY ++F     V  
Sbjct: 484 YIMHVKDVAADGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWAEYAQLFRDPIRVDE 543

Query: 356 FENCEKNFKKSGK-DECMELPQSGYLVASKYHDIVVFFSKAKSATFLPLRSA-LPENGPK 183
             +  ++F+     D  M +P  G+++AS+Y+ ++V+ S     TFLPLRSA  P    +
Sbjct: 544 LIHVLEHFQSPADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAPTPLPMRR 603

Query: 182 VISIG 168
           V+SIG
Sbjct: 604 VLSIG 608


>gb|AFK36768.1| unknown [Lotus japonicus]
          Length = 179

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
 Frame = -3

Query: 512 ILKHLGDGTISFMA*ALA*GYRKENWIKVQADLLVELSCFKNEYVKMFS--VRGFENCEK 339
           I+  + DG   F A A   G  + NW +++ DL  EL  F +EYV ++    R  +  + 
Sbjct: 48  IIDVVPDGNCGFRALAALLGQEEHNWAQIRIDLAKELQEFHHEYVALYGSIERVNQLLDS 107

Query: 338 NFKKSG----KDECMELPQSGYLVASKYHDIVVFFSKAKSATFLPLRS-ALPENGPKVIS 174
            +   G     D+ M LP  GYL+A+K+  + +  S     TF PLR    P    K+I+
Sbjct: 108 LYTIPGMLVTPDKWMSLPDMGYLIATKFKLVFLVLSNCGCITFFPLRGHTSPMRNHKIIA 167

Query: 173 IGL 165
           +GL
Sbjct: 168 VGL 170


>ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805365 [Glycine max]
          Length = 878

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
 Frame = -3

Query: 497  GDGTISFMA*ALA*GYRKENWIKVQADLLVELSCFKNEYVKMFSVRGFENCEKNFKKS-- 324
            GD    + A A   G  +E+W  V+ DL+ EL  +++ Y K+F   G  +     +KS  
Sbjct: 699  GDSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAKLF---GSNDRVAELRKSLY 755

Query: 323  -GKDEC----MELPQSGYLVASKYHDIVVFFSKAKSATFLPLRSALP--ENGPKVISIG 168
             GK       M +P  GY++AS+Y+ ++V  S  +  TF PLR   P  ++  ++ISIG
Sbjct: 756  VGKQASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLRGRPPLSQSSHRLISIG 814


>ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800409 [Glycine max]
          Length = 877

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
 Frame = -3

Query: 497  GDGTISFMA*ALA*GYRKENWIKVQADLLVELSCFKNEYVKMFS----VRGFENCEKNFK 330
            GD    + A A   G  +E+W  V+ DL+ EL  +++ Y K+F     V          K
Sbjct: 698  GDSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAKLFGSNDRVAELRQSLYVGK 757

Query: 329  KSGKDECMELPQSGYLVASKYHDIVVFFSKAKSATFLPLRSALP--ENGPKVISIG 168
            ++     M +P  GY++AS+Y+ ++V  S  +  TF PLR   P  ++  ++ISIG
Sbjct: 758  QASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLRGRPPLSQSSYRLISIG 813


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