BLASTX nr result
ID: Coptis25_contig00003269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003269
(879 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282816.1| PREDICTED: importin subunit alpha-1 isoform ... 263 1e-83
ref|XP_003633608.1| PREDICTED: importin subunit alpha-1 isoform ... 263 3e-83
ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis v... 258 3e-82
ref|XP_002512485.1| importin alpha, putative [Ricinus communis] ... 259 3e-81
ref|XP_002328576.1| predicted protein [Populus trichocarpa] gi|2... 255 1e-80
>ref|XP_002282816.1| PREDICTED: importin subunit alpha-1 isoform 1 [Vitis vinifera]
gi|296089748|emb|CBI39567.3| unnamed protein product
[Vitis vinifera]
Length = 527
Score = 263 bits (672), Expect(3) = 1e-83
Identities = 133/152 (87%), Positives = 135/152 (88%)
Frame = -2
Query: 572 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 393
DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG
Sbjct: 255 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 314
Query: 392 DDMQTQAIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPL 213
DDMQTQ IIN QALPCLL+LLTNNHKKSIKKEACWTISNITAGNK IGPL
Sbjct: 315 DDMQTQCIINHQALPCLLNLLTNNHKKSIKKEACWTISNITAGNKEQIQAVIEANIIGPL 374
Query: 212 VHLLQTAEFDIKKEAAWALSNATSGGDPNQIK 117
VHLLQ AEFDIKKEAAWA+SNATSGG QIK
Sbjct: 375 VHLLQNAEFDIKKEAAWAISNATSGGSHEQIK 406
Score = 72.0 bits (175), Expect(3) = 1e-83
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = -3
Query: 817 GNVAGDSPKCRDLVLGHGALIPLLAQLNEHAKLGLYQN 704
GNVAGDSP+CRDLVLGHGAL+PLLAQLNEHAKL + +N
Sbjct: 183 GNVAGDSPRCRDLVLGHGALLPLLAQLNEHAKLSMLRN 220
Score = 23.1 bits (48), Expect(3) = 1e-83
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 609 FGLAKPALPALER 571
F KPALPALER
Sbjct: 237 FDQTKPALPALER 249
Score = 67.0 bits (162), Expect = 5e-09
Identities = 42/139 (30%), Positives = 68/139 (48%)
Frame = -2
Query: 554 DACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQ 375
+A WAL+ ++ GT+D + VI+ G P V+LL PS V A+ +GN+
Sbjct: 135 EAAWALTNIASGTSDNTKVVIDHGAVPVFVKLLGSPSDDVREQAVWALGNVAGDSPRCRD 194
Query: 374 AIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPLVHLLQT 195
++ AL LL+ L + K S+ + A WT+SN G K + L L+ +
Sbjct: 195 LVLGHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRG-KPQPPFDQTKPALPALERLIHS 253
Query: 194 AEFDIKKEAAWALSNATSG 138
+ ++ +A WALS + G
Sbjct: 254 NDEEVLTDACWALSYLSDG 272
>ref|XP_003633608.1| PREDICTED: importin subunit alpha-1 isoform 2 [Vitis vinifera]
Length = 528
Score = 263 bits (672), Expect(3) = 3e-83
Identities = 133/152 (87%), Positives = 135/152 (88%)
Frame = -2
Query: 572 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 393
DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG
Sbjct: 256 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 315
Query: 392 DDMQTQAIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPL 213
DDMQTQ IIN QALPCLL+LLTNNHKKSIKKEACWTISNITAGNK IGPL
Sbjct: 316 DDMQTQCIINHQALPCLLNLLTNNHKKSIKKEACWTISNITAGNKEQIQAVIEANIIGPL 375
Query: 212 VHLLQTAEFDIKKEAAWALSNATSGGDPNQIK 117
VHLLQ AEFDIKKEAAWA+SNATSGG QIK
Sbjct: 376 VHLLQNAEFDIKKEAAWAISNATSGGSHEQIK 407
Score = 72.0 bits (175), Expect(3) = 3e-83
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = -3
Query: 817 GNVAGDSPKCRDLVLGHGALIPLLAQLNEHAKLGLYQN 704
GNVAGDSP+CRDLVLGHGAL+PLLAQLNEHAKL + +N
Sbjct: 183 GNVAGDSPRCRDLVLGHGALLPLLAQLNEHAKLSMLRN 220
Score = 21.9 bits (45), Expect(3) = 3e-83
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 597 KPALPALER 571
KPALPALER
Sbjct: 242 KPALPALER 250
Score = 69.3 bits (168), Expect = 1e-09
Identities = 41/139 (29%), Positives = 67/139 (48%)
Frame = -2
Query: 554 DACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQ 375
+A WAL+ ++ GT+D + VI+ G P V+LL PS V A+ +GN+
Sbjct: 135 EAAWALTNIASGTSDNTKVVIDHGAVPVFVKLLGSPSDDVREQAVWALGNVAGDSPRCRD 194
Query: 374 AIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPLVHLLQT 195
++ AL LL+ L + K S+ + A WT+SN G + L L+ +
Sbjct: 195 LVLGHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQQTKPALPALERLIHS 254
Query: 194 AEFDIKKEAAWALSNATSG 138
+ ++ +A WALS + G
Sbjct: 255 NDEEVLTDACWALSYLSDG 273
>ref|XP_002275593.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
gi|296083287|emb|CBI22923.3| unnamed protein product
[Vitis vinifera]
Length = 529
Score = 258 bits (658), Expect(3) = 3e-82
Identities = 131/152 (86%), Positives = 135/152 (88%)
Frame = -2
Query: 572 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 393
DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG
Sbjct: 255 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 314
Query: 392 DDMQTQAIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPL 213
DD+QTQ+IIN ALPCLLSLLT+NHKKSIKKEACWTISNITAGNK I PL
Sbjct: 315 DDIQTQSIINHGALPCLLSLLTHNHKKSIKKEACWTISNITAGNKEQIQAVIEAGVIAPL 374
Query: 212 VHLLQTAEFDIKKEAAWALSNATSGGDPNQIK 117
VHLLQTAEFDIKKEAAWA+SNATSGG QIK
Sbjct: 375 VHLLQTAEFDIKKEAAWAISNATSGGTHEQIK 406
Score = 72.8 bits (177), Expect(3) = 3e-82
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = -3
Query: 817 GNVAGDSPKCRDLVLGHGALIPLLAQLNEHAKLGLYQN 704
GNVAGDSP+CRDLVLGHGALIPLLAQLNEHAKL + +N
Sbjct: 183 GNVAGDSPRCRDLVLGHGALIPLLAQLNEHAKLSMLRN 220
Score = 23.1 bits (48), Expect(3) = 3e-82
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 609 FGLAKPALPALER 571
F KPALPALER
Sbjct: 237 FDQVKPALPALER 249
Score = 66.2 bits (160), Expect = 9e-09
Identities = 41/139 (29%), Positives = 69/139 (49%)
Frame = -2
Query: 554 DACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQ 375
+A WAL+ ++ GT++ + VI+ G P V+LL PS V A+ +GN+
Sbjct: 135 EAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRD 194
Query: 374 AIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPLVHLLQT 195
++ AL LL+ L + K S+ + A WT+SN G K + L L+ +
Sbjct: 195 LVLGHGALIPLLAQLNEHAKLSMLRNATWTLSNFCRG-KPQPPFDQVKPALPALERLVHS 253
Query: 194 AEFDIKKEAAWALSNATSG 138
++ ++ +A WALS + G
Sbjct: 254 SDEEVLTDACWALSYLSDG 272
>ref|XP_002512485.1| importin alpha, putative [Ricinus communis]
gi|223548446|gb|EEF49937.1| importin alpha, putative
[Ricinus communis]
Length = 531
Score = 259 bits (663), Expect(3) = 3e-81
Identities = 131/152 (86%), Positives = 136/152 (89%)
Frame = -2
Query: 572 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 393
DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG
Sbjct: 255 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 314
Query: 392 DDMQTQAIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPL 213
DDMQTQ IIN QALPCLL+LLTNN+KKSIKKEACWTISNITAGNK IGPL
Sbjct: 315 DDMQTQCIINHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKEQIQAVIEANIIGPL 374
Query: 212 VHLLQTAEFDIKKEAAWALSNATSGGDPNQIK 117
VHLL+ AEFDIKKEAAWA+SNATSGG +QIK
Sbjct: 375 VHLLENAEFDIKKEAAWAISNATSGGTHDQIK 406
Score = 70.5 bits (171), Expect(3) = 3e-81
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = -3
Query: 817 GNVAGDSPKCRDLVLGHGALIPLLAQLNEHAKLGLYQN 704
GNVAGDSPKCRDLVLG+GAL+PLLAQLNEHAKL + +N
Sbjct: 183 GNVAGDSPKCRDLVLGNGALLPLLAQLNEHAKLSMLRN 220
Score = 20.4 bits (41), Expect(3) = 3e-81
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 609 FGLAKPALPALER 571
F KPALPAL R
Sbjct: 237 FEQVKPALPALAR 249
Score = 66.6 bits (161), Expect = 7e-09
Identities = 41/139 (29%), Positives = 68/139 (48%)
Frame = -2
Query: 554 DACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQ 375
+A WAL+ ++ GT++ + VI+ G P V+LL PS V A+ +GN+
Sbjct: 135 EAAWALTNIASGTSENTRVVIDHGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPKCRD 194
Query: 374 AIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPLVHLLQT 195
++ AL LL+ L + K S+ + A WT+SN G K + L L+ +
Sbjct: 195 LVLGNGALLPLLAQLNEHAKLSMLRNATWTLSNFCRG-KPQPFFEQVKPALPALARLIHS 253
Query: 194 AEFDIKKEAAWALSNATSG 138
+ ++ +A WALS + G
Sbjct: 254 NDEEVLTDACWALSYLSDG 272
>ref|XP_002328576.1| predicted protein [Populus trichocarpa] gi|222838558|gb|EEE76923.1|
predicted protein [Populus trichocarpa]
Length = 529
Score = 255 bits (652), Expect(3) = 1e-80
Identities = 130/152 (85%), Positives = 134/152 (88%)
Frame = -2
Query: 572 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 393
DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVL+PALRTVGNIVTG
Sbjct: 256 DEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLVPALRTVGNIVTG 315
Query: 392 DDMQTQAIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPL 213
DDMQTQ IIN ALPCLLSLLT+NHKKSIKKEACWTISNITAGNK IGPL
Sbjct: 316 DDMQTQCIINTGALPCLLSLLTHNHKKSIKKEACWTISNITAGNKEQIQAVIEAGLIGPL 375
Query: 212 VHLLQTAEFDIKKEAAWALSNATSGGDPNQIK 117
V+LLQ AEFDIKKEAAWA+SNATSGG QIK
Sbjct: 376 VNLLQNAEFDIKKEAAWAVSNATSGGTHEQIK 407
Score = 71.6 bits (174), Expect(3) = 1e-80
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = -3
Query: 817 GNVAGDSPKCRDLVLGHGALIPLLAQLNEHAKLGLYQN 704
GNVAGDSPKCRDLVL HGALIPLLAQLNEHAKL + +N
Sbjct: 184 GNVAGDSPKCRDLVLSHGALIPLLAQLNEHAKLSMLRN 221
Score = 21.6 bits (44), Expect(3) = 1e-80
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 609 FGLAKPALPALER 571
F +PALPALER
Sbjct: 238 FEKVRPALPALER 250
Score = 66.2 bits (160), Expect = 9e-09
Identities = 41/139 (29%), Positives = 69/139 (49%)
Frame = -2
Query: 554 DACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQ 375
+A WAL+ ++ GT++ + VI+ G P V+LL PS V A+ +GN+
Sbjct: 136 EAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPKCRD 195
Query: 374 AIINFQALPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPLVHLLQT 195
+++ AL LL+ L + K S+ + A WT+SN G K + L L+ +
Sbjct: 196 LVLSHGALIPLLAQLNEHAKLSMLRNATWTLSNFCRG-KPQPLFEKVRPALPALERLVHS 254
Query: 194 AEFDIKKEAAWALSNATSG 138
+ ++ +A WALS + G
Sbjct: 255 TDEEVLTDACWALSYLSDG 273
Score = 56.6 bits (135), Expect = 7e-06
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Frame = -2
Query: 530 LSDGTNDKIQAVIEAGVCPRLVELLLHPS-PSVLIPALRTVGNIVTGDDMQTQAIINFQA 354
LS + I+ VI+AGV PR VELL+ P + A + NI +G T+ +I+ A
Sbjct: 101 LSIERSPPIEEVIQAGVVPRFVELLVREDFPQLQFEAAWALTNIASGTSENTKVVIDHGA 160
Query: 353 LPCLLSLLTNNHKKSIKKEACWTISNITAGNKXXXXXXXXXXXIGPLV-HLLQTAEFDIK 177
+P + LL + ++++A W + N+ + + PL+ L + A+ +
Sbjct: 161 VPIFVKLL-GSPSDDVREQAVWALGNVAGDSPKCRDLVLSHGALIPLLAQLNEHAKLSML 219
Query: 176 KEAAWALSNATSG 138
+ A W LSN G
Sbjct: 220 RNATWTLSNFCRG 232