BLASTX nr result

ID: Coptis25_contig00003258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003258
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515494.1| conserved hypothetical protein [Ricinus comm...   216   3e-54
ref|XP_002324868.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
ref|XP_002309637.1| predicted protein [Populus trichocarpa] gi|2...   212   6e-53
ref|NP_567888.2| Phox (PX) domain-containing protein [Arabidopsi...   211   8e-53
emb|CBI21059.3| unnamed protein product [Vitis vinifera]              210   2e-52

>ref|XP_002515494.1| conserved hypothetical protein [Ricinus communis]
           gi|223545438|gb|EEF46943.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 710

 Score =  216 bits (550), Expect = 3e-54
 Identities = 93/128 (72%), Positives = 111/128 (86%)
 Frame = +1

Query: 271 KQKSQPKHRHDGNSPLPLGMDWSPPPKKWDGRDTIWPHDPRSGWSYCVTIPSWIIFPKSR 450
           +++S PKHRHDG SPLPLGMDWSPPP+KW+GR+TIWPHDPRSGWSYCV IPSW++ PKSR
Sbjct: 2   QRRSPPKHRHDGTSPLPLGMDWSPPPRKWNGRNTIWPHDPRSGWSYCVIIPSWVVLPKSR 61

Query: 451 DAEGVVFYRVQVGVQSPEGISTARGVLRRFSDFMKLIAALKRIFPKKNLPPAPSKHILRI 630
           D++ VVFYRVQ+G+QSPEG++T RGVLRRF+DF+KL   LKR FPKKNLPPAP K +LR+
Sbjct: 62  DSDPVVFYRVQIGLQSPEGVTTTRGVLRRFNDFLKLYTDLKRSFPKKNLPPAPPKGLLRL 121

Query: 631 NSNRSLPE 654
            S   L E
Sbjct: 122 KSRALLEE 129


>ref|XP_002324868.1| predicted protein [Populus trichocarpa] gi|222866302|gb|EEF03433.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score =  213 bits (543), Expect = 2e-53
 Identities = 92/130 (70%), Positives = 109/130 (83%)
 Frame = +1

Query: 265 MQKQKSQPKHRHDGNSPLPLGMDWSPPPKKWDGRDTIWPHDPRSGWSYCVTIPSWIIFPK 444
           MQ+ +S PKHRHDG SPLPLGMDWSPPP+KW  R+TIWPHDPR+GWSYCV IPSW++ PK
Sbjct: 1   MQRLRSPPKHRHDGTSPLPLGMDWSPPPRKWSARETIWPHDPRTGWSYCVAIPSWVVVPK 60

Query: 445 SRDAEGVVFYRVQVGVQSPEGISTARGVLRRFSDFMKLIAALKRIFPKKNLPPAPSKHIL 624
           SRD++ VVFYRVQVG+QSPEG++T RGVLRRF+DFMKL   LK+ FP+K LPPAP K +L
Sbjct: 61  SRDSDPVVFYRVQVGLQSPEGVTTTRGVLRRFNDFMKLFTDLKKAFPRKTLPPAPPKGLL 120

Query: 625 RINSNRSLPE 654
           R+ S   L E
Sbjct: 121 RLKSRALLEE 130


>ref|XP_002309637.1| predicted protein [Populus trichocarpa] gi|222855613|gb|EEE93160.1|
           predicted protein [Populus trichocarpa]
          Length = 669

 Score =  212 bits (539), Expect = 6e-53
 Identities = 91/126 (72%), Positives = 107/126 (84%)
 Frame = +1

Query: 277 KSQPKHRHDGNSPLPLGMDWSPPPKKWDGRDTIWPHDPRSGWSYCVTIPSWIIFPKSRDA 456
           +S PKHRHDG SPLPLGMDWSPPP+KW GR+T+WPHDPR+GWSYCVTIPSW + PKSRD+
Sbjct: 1   RSPPKHRHDGTSPLPLGMDWSPPPRKWSGRETVWPHDPRTGWSYCVTIPSWAVLPKSRDS 60

Query: 457 EGVVFYRVQVGVQSPEGISTARGVLRRFSDFMKLIAALKRIFPKKNLPPAPSKHILRINS 636
           + VVFYRVQVGVQSPEG +T RGVL+RF+DFMKL   LK+ FP+KN+PPAP K +LR+ S
Sbjct: 61  DPVVFYRVQVGVQSPEGATTIRGVLKRFNDFMKLFTDLKKAFPRKNIPPAPPKGLLRLKS 120

Query: 637 NRSLPE 654
              L E
Sbjct: 121 RALLEE 126


>ref|NP_567888.2| Phox (PX) domain-containing protein [Arabidopsis thaliana]
           gi|332660612|gb|AEE86012.1| Phox (PX) domain-containing
           protein [Arabidopsis thaliana]
          Length = 723

 Score =  211 bits (538), Expect = 8e-53
 Identities = 92/130 (70%), Positives = 110/130 (84%)
 Frame = +1

Query: 265 MQKQKSQPKHRHDGNSPLPLGMDWSPPPKKWDGRDTIWPHDPRSGWSYCVTIPSWIIFPK 444
           M +++S PKHRHDG SPLPLGMDWSPPP+KW+GRDT+WPHDPR+GWSYCVTIPSWI+ PK
Sbjct: 1   MMQRRSPPKHRHDGTSPLPLGMDWSPPPRKWNGRDTVWPHDPRTGWSYCVTIPSWIVLPK 60

Query: 445 SRDAEGVVFYRVQVGVQSPEGISTARGVLRRFSDFMKLIAALKRIFPKKNLPPAPSKHIL 624
           SR+++ VVFYRVQV VQSPEGI+T RGVLRRF+DF+KL+  LKR FP+K  P AP K +L
Sbjct: 61  SRNSDPVVFYRVQVSVQSPEGITTMRGVLRRFNDFLKLLTDLKRTFPRKGFPSAPPKGLL 120

Query: 625 RINSNRSLPE 654
           R+ S   L E
Sbjct: 121 RMKSRAVLEE 130


>emb|CBI21059.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  210 bits (535), Expect = 2e-52
 Identities = 93/131 (70%), Positives = 110/131 (83%)
 Frame = +1

Query: 265 MQKQKSQPKHRHDGNSPLPLGMDWSPPPKKWDGRDTIWPHDPRSGWSYCVTIPSWIIFPK 444
           M ++ S PKHRHDG SPLPLGMDWSPPP+KW GRDT+WPHD  +GWSYCV IPSW++ PK
Sbjct: 1   MMRRSSPPKHRHDGTSPLPLGMDWSPPPRKWSGRDTVWPHDYHTGWSYCVIIPSWVVLPK 60

Query: 445 SRDAEGVVFYRVQVGVQSPEGISTARGVLRRFSDFMKLIAALKRIFPKKNLPPAPSKHIL 624
           SRD++ VVFYRVQVGVQSPEGI+T RGVLRRF+DF+KL   LK+ FPKKN+PPAP K +L
Sbjct: 61  SRDSDPVVFYRVQVGVQSPEGITTMRGVLRRFNDFLKLFTDLKKAFPKKNIPPAPPKGLL 120

Query: 625 RINSNRSLPEE 657
           R+  NR L E+
Sbjct: 121 RM-KNRVLLEQ 130


Top