BLASTX nr result
ID: Coptis25_contig00003257
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003257
(1337 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514918.1| protein with unknown function [Ricinus commu... 327 e-131
ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267... 329 e-131
emb|CBI27652.3| unnamed protein product [Vitis vinifera] 329 e-131
ref|XP_002888593.1| meiotic asynaptic mutant 1 [Arabidopsis lyra... 271 e-111
ref|NP_564896.1| DNA-binding HORMA-like protein [Arabidopsis tha... 266 e-109
>ref|XP_002514918.1| protein with unknown function [Ricinus communis]
gi|223545969|gb|EEF47472.1| protein with unknown function
[Ricinus communis]
Length = 613
Score = 327 bits (839), Expect(2) = e-131
Identities = 175/304 (57%), Positives = 217/304 (71%), Gaps = 1/304 (0%)
Frame = +1
Query: 355 NHSSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXXLARVTDWLTSRHIDTVELTDV 534
+ S NQY+VAPV K R EDN M+ LARV W+TS H+DTV L DV
Sbjct: 269 SQSQENQYMVAPVEKERREEDNGMVDQDDTEDPEEDEQQLARVKGWITSHHLDTVGLNDV 328
Query: 535 LSNFPDISMTLTEELMGKLVDGGVLSRTGRDTYTISNRKGFESHLSDVKKEMDAEETLDD 714
LSNFPDIS+ LTEE+M KLV GV+S++G DTYT +N++ + + VK+EMD + +
Sbjct: 329 LSNFPDISVVLTEEIMDKLVKEGVISKSGPDTYTKNNQQKSDFEFTVVKEEMDGQAIPNG 388
Query: 715 TTPKRTDEDYMYMKALYHALPMDYVTVTKLQTKLDGDANQTTVQKLIDKMAQDGYLEGVN 894
R D D+MYMKALYHALPM+YVTV KLQTKLDG+ANQTTV+KLIDKM +DGYLE
Sbjct: 389 NKAPRID-DHMYMKALYHALPMNYVTVAKLQTKLDGEANQTTVRKLIDKMTRDGYLEAKG 447
Query: 895 NRRLGKRVVHSELTNKKLLEVKKALGDNPSAMEICEPENRSNTVGFVKTSANHRDTSTCG 1074
NRRLGKRV+HS T KKL E+KK LG+N ++ E + +SN + F+K+ +HRDTSTCG
Sbjct: 448 NRRLGKRVIHSIQTEKKLAELKKILGNNLMYVDKNEQQIKSNHIEFLKSGNDHRDTSTCG 507
Query: 1075 GLHSIGCDLTRTKGRSDINQNGSMRSEQIVGRMREQGNTPVSR-LEPVASRESIAQGNEH 1251
LHS+G DLTR + RSDIN NGS+RSEQ + + GNTP SR ++PVASRES AQGNE+
Sbjct: 508 ALHSVGSDLTRMRIRSDINHNGSVRSEQTISK---TGNTPTSRNVQPVASRESFAQGNEN 564
Query: 1252 N*AN 1263
AN
Sbjct: 565 GRAN 568
Score = 169 bits (427), Expect(2) = e-131
Identities = 80/97 (82%), Positives = 87/97 (89%)
Frame = +2
Query: 2 ACKMVRTLVQLMRTLDRMLEERTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSP 181
ACKM+RTLVQLMRTLDRM EERT+LMKL YYDD+TP DYEPPFFR C+E+EA N W KSP
Sbjct: 152 ACKMIRTLVQLMRTLDRMPEERTMLMKLLYYDDVTPADYEPPFFRECTEEEAHNPWNKSP 211
Query: 182 LKMEVGNVNSKRFVLALKVKSVLDPCGDENDDLQGDE 292
LKMEVGNVNSK FVLALKVKSVLDPC DENDD++ DE
Sbjct: 212 LKMEVGNVNSKHFVLALKVKSVLDPCEDENDDMEEDE 248
>ref|XP_002271582.1| PREDICTED: uncharacterized protein LOC100267642 [Vitis vinifera]
Length = 662
Score = 329 bits (843), Expect(2) = e-131
Identities = 169/310 (54%), Positives = 220/310 (70%), Gaps = 1/310 (0%)
Frame = +1
Query: 355 NHSSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXXLARVTDWLTSRHIDTVELTDV 534
N S +QYIVAPV K++ ED M+ L+RV DW++ H+DT+ELTDV
Sbjct: 314 NLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDWISCCHLDTIELTDV 373
Query: 535 LSNFPDISMTLTEELMGKLVDGGVLSRTGRDTYTISNRKGFESHLSDVKKEMDAEET-LD 711
LSNFPDIS+ LTEE+M KLV GVLS+TG+D YTI +K E VK+EM A+ ++
Sbjct: 374 LSNFPDISVVLTEEIMDKLVKEGVLSKTGKDAYTIKRQKECEYEFDAVKEEMGAQALPIN 433
Query: 712 DTTPKRTDEDYMYMKALYHALPMDYVTVTKLQTKLDGDANQTTVQKLIDKMAQDGYLEGV 891
D + ED+MYMKALY+ALPM+YVTV KLQ L G ANQTTV+KLID+M QDG+++
Sbjct: 434 DKVDQAMGEDHMYMKALYYALPMNYVTVPKLQNMLQGQANQTTVRKLIDRMTQDGFIDAK 493
Query: 892 NNRRLGKRVVHSELTNKKLLEVKKALGDNPSAMEICEPENRSNTVGFVKTSANHRDTSTC 1071
+NRRLGKRV+HS+LT KKL+EV K+L + +++ EP + SN +GF +N +D STC
Sbjct: 494 SNRRLGKRVIHSDLTEKKLIEVTKSLNNEAMDLDVSEPHDNSNHLGFHTNGSNLKDMSTC 553
Query: 1072 GGLHSIGCDLTRTKGRSDINQNGSMRSEQIVGRMREQGNTPVSRLEPVASRESIAQGNEH 1251
G LHSIG DLTR +GRSD+ QNGS+RSEQ + + QGNTP SR+EP+ASRES A G+++
Sbjct: 554 GVLHSIGSDLTRMRGRSDVYQNGSIRSEQTISKTLGQGNTPTSRVEPIASRESFAPGSDN 613
Query: 1252 N*ANRRNTDY 1281
AN NT+Y
Sbjct: 614 TRAN-GNTNY 622
Score = 166 bits (421), Expect(2) = e-131
Identities = 79/97 (81%), Positives = 87/97 (89%)
Frame = +2
Query: 2 ACKMVRTLVQLMRTLDRMLEERTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSP 181
ACKMVRTLVQLMRTLDRM EERTILMKL YYDD+TP+DYEPPFFR C+E+EA SW K+P
Sbjct: 197 ACKMVRTLVQLMRTLDRMPEERTILMKLLYYDDVTPVDYEPPFFRSCTEEEAHISWNKNP 256
Query: 182 LKMEVGNVNSKRFVLALKVKSVLDPCGDENDDLQGDE 292
LKMEVGNVNSK VLALKVKSVLDPC DEN+D+Q D+
Sbjct: 257 LKMEVGNVNSKHLVLALKVKSVLDPCEDENEDIQNDD 293
>emb|CBI27652.3| unnamed protein product [Vitis vinifera]
Length = 527
Score = 329 bits (843), Expect(2) = e-131
Identities = 169/310 (54%), Positives = 220/310 (70%), Gaps = 1/310 (0%)
Frame = +1
Query: 355 NHSSGNQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXXLARVTDWLTSRHIDTVELTDV 534
N S +QYIVAPV K++ ED M+ L+RV DW++ H+DT+ELTDV
Sbjct: 179 NLSQRDQYIVAPVDKQKPPEDTGMVDEDDTQDSVEDEQQLSRVKDWISCCHLDTIELTDV 238
Query: 535 LSNFPDISMTLTEELMGKLVDGGVLSRTGRDTYTISNRKGFESHLSDVKKEMDAEET-LD 711
LSNFPDIS+ LTEE+M KLV GVLS+TG+D YTI +K E VK+EM A+ ++
Sbjct: 239 LSNFPDISVVLTEEIMDKLVKEGVLSKTGKDAYTIKRQKECEYEFDAVKEEMGAQALPIN 298
Query: 712 DTTPKRTDEDYMYMKALYHALPMDYVTVTKLQTKLDGDANQTTVQKLIDKMAQDGYLEGV 891
D + ED+MYMKALY+ALPM+YVTV KLQ L G ANQTTV+KLID+M QDG+++
Sbjct: 299 DKVDQAMGEDHMYMKALYYALPMNYVTVPKLQNMLQGQANQTTVRKLIDRMTQDGFIDAK 358
Query: 892 NNRRLGKRVVHSELTNKKLLEVKKALGDNPSAMEICEPENRSNTVGFVKTSANHRDTSTC 1071
+NRRLGKRV+HS+LT KKL+EV K+L + +++ EP + SN +GF +N +D STC
Sbjct: 359 SNRRLGKRVIHSDLTEKKLIEVTKSLNNEAMDLDVSEPHDNSNHLGFHTNGSNLKDMSTC 418
Query: 1072 GGLHSIGCDLTRTKGRSDINQNGSMRSEQIVGRMREQGNTPVSRLEPVASRESIAQGNEH 1251
G LHSIG DLTR +GRSD+ QNGS+RSEQ + + QGNTP SR+EP+ASRES A G+++
Sbjct: 419 GVLHSIGSDLTRMRGRSDVYQNGSIRSEQTISKTLGQGNTPTSRVEPIASRESFAPGSDN 478
Query: 1252 N*ANRRNTDY 1281
AN NT+Y
Sbjct: 479 TRAN-GNTNY 487
Score = 166 bits (421), Expect(2) = e-131
Identities = 79/97 (81%), Positives = 87/97 (89%)
Frame = +2
Query: 2 ACKMVRTLVQLMRTLDRMLEERTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSP 181
ACKMVRTLVQLMRTLDRM EERTILMKL YYDD+TP+DYEPPFFR C+E+EA SW K+P
Sbjct: 62 ACKMVRTLVQLMRTLDRMPEERTILMKLLYYDDVTPVDYEPPFFRSCTEEEAHISWNKNP 121
Query: 182 LKMEVGNVNSKRFVLALKVKSVLDPCGDENDDLQGDE 292
LKMEVGNVNSK VLALKVKSVLDPC DEN+D+Q D+
Sbjct: 122 LKMEVGNVNSKHLVLALKVKSVLDPCEDENEDIQNDD 158
>ref|XP_002888593.1| meiotic asynaptic mutant 1 [Arabidopsis lyrata subsp. lyrata]
gi|297334434|gb|EFH64852.1| meiotic asynaptic mutant 1
[Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 271 bits (692), Expect(2) = e-111
Identities = 149/291 (51%), Positives = 196/291 (67%), Gaps = 2/291 (0%)
Frame = +1
Query: 370 NQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXXLARVTDWLTSRHIDTVELTDVLSNFP 549
NQ+IVAPV K+ +D ++ LARV DW+ SRH+DT+ELTD+L+NFP
Sbjct: 270 NQFIVAPVEKQD-DDDGEVDEDDNTQDPVENEQQLARVKDWINSRHLDTLELTDILANFP 328
Query: 550 DISMTLTEELMGKLVDGGVLSRTGRDTYTISNRKGFESHLSDVKKEMDAEETLDDTTPKR 729
DIS+ L+EE+M +LV GVLS+TG+DTY K ES + VK E D + D P
Sbjct: 329 DISIVLSEEIMDQLVTEGVLSKTGKDTYIKKRDKTPESEFTFVKDEADVQTVPKDGKPV- 387
Query: 730 TDEDYMYMKALYHALPMDYVTVTKLQTKLDGDANQTTVQKLIDKMAQDGYLEGVNNRRLG 909
EDY+YMKALYH+LPM YVT+TKL LDG+ANQT V+KL+D+M Q+GY+E +NRRLG
Sbjct: 388 APEDYLYMKALYHSLPMKYVTITKLHNMLDGEANQTAVRKLMDRMTQEGYVEASSNRRLG 447
Query: 910 KRVVHSELTNKKLLEVKKALGDNPSAMEICEPENRSNTVGFVKTSANHRDTSTCGGLHSI 1089
KRV+HS LT +KL EV+K L + +++ E N++N + T+ D STCGG+HSI
Sbjct: 448 KRVIHSSLTERKLNEVRKVLATDDMDVDVNEAANKTNGLEGKVTA----DVSTCGGIHSI 503
Query: 1090 GCDLTRTKGRS-DINQNGSMRSEQIVGRMREQGNTPVS-RLEPVASRESIA 1236
G D TRTKGRS + QNGS+ SEQ + + GNTP+S + +P ASRES A
Sbjct: 504 GSDFTRTKGRSGGMQQNGSVLSEQTISK---AGNTPISNKAQPAASRESFA 551
Score = 158 bits (400), Expect(2) = e-111
Identities = 74/96 (77%), Positives = 83/96 (86%)
Frame = +2
Query: 2 ACKMVRTLVQLMRTLDRMLEERTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSP 181
ACKMVRTLVQLMRTLD+M +ERTI+MKL YYDD+TP DYEPPFFR C+E EA WTK+P
Sbjct: 148 ACKMVRTLVQLMRTLDKMPDERTIVMKLLYYDDVTPPDYEPPFFRGCTEDEAQYVWTKNP 207
Query: 182 LKMEVGNVNSKRFVLALKVKSVLDPCGDENDDLQGD 289
L+ME+GNVNSK VL LKVKSVLDPC DENDD+Q D
Sbjct: 208 LRMEIGNVNSKHLVLTLKVKSVLDPCEDENDDMQND 243
>ref|NP_564896.1| DNA-binding HORMA-like protein [Arabidopsis thaliana]
gi|332196517|gb|AEE34638.1| DNA-binding HORMA-like
protein [Arabidopsis thaliana]
Length = 596
Score = 266 bits (679), Expect(2) = e-109
Identities = 147/291 (50%), Positives = 195/291 (67%), Gaps = 2/291 (0%)
Frame = +1
Query: 370 NQYIVAPVGKRRCSEDNDMIXXXXXXXXXXXXXXLARVTDWLTSRHIDTVELTDVLSNFP 549
NQ+IVAPV K+ +D ++ LARV DW+ SRH+DT+ELTD+L+NFP
Sbjct: 272 NQFIVAPVEKQD-DDDGEVDEDDNTQDPAENEQQLARVKDWINSRHLDTLELTDILANFP 330
Query: 550 DISMTLTEELMGKLVDGGVLSRTGRDTYTISNRKGFESHLSDVKKEMDAEETLDDTTPKR 729
DIS+ L+EE+M +LV GVLS+TG+D Y K ES + VK+E D + + +
Sbjct: 331 DISIVLSEEIMDQLVTEGVLSKTGKDMYIKKRDKTPESEFTFVKEEADGQISPGKSV--- 387
Query: 730 TDEDYMYMKALYHALPMDYVTVTKLQTKLDGDANQTTVQKLIDKMAQDGYLEGVNNRRLG 909
EDY+YMKALYH+LPM YVT+TKL LDG+ANQT V+KL+D+M Q+GY+E +NRRLG
Sbjct: 388 APEDYLYMKALYHSLPMKYVTITKLHNMLDGEANQTAVRKLMDRMTQEGYVEASSNRRLG 447
Query: 910 KRVVHSELTNKKLLEVKKALGDNPSAMEICEPENRSNTVGFVKTSANHRDTSTCGGLHSI 1089
KRV+HS LT KKL EV+K L + +++ E N++N T+ D STCGG+HSI
Sbjct: 448 KRVIHSSLTEKKLNEVRKVLATDDMDVDVTETINKTNGPDAKVTA----DVSTCGGIHSI 503
Query: 1090 GCDLTRTKGRS-DINQNGSMRSEQIVGRMREQGNTPVS-RLEPVASRESIA 1236
G D TRTKGRS + QNGS+ SEQ + + GNTP+S + +P ASRES A
Sbjct: 504 GSDFTRTKGRSGGMQQNGSVLSEQTISK---AGNTPISNKAQPAASRESFA 551
Score = 158 bits (399), Expect(2) = e-109
Identities = 74/96 (77%), Positives = 83/96 (86%)
Frame = +2
Query: 2 ACKMVRTLVQLMRTLDRMLEERTILMKLHYYDDITPMDYEPPFFRCCSEQEASNSWTKSP 181
ACKMVRTLVQLMRTLD+M +ERTI+MKL YYDD+TP DYEPPFFR C+E EA WTK+P
Sbjct: 150 ACKMVRTLVQLMRTLDKMPDERTIVMKLLYYDDVTPPDYEPPFFRGCTEDEAQYVWTKNP 209
Query: 182 LKMEVGNVNSKRFVLALKVKSVLDPCGDENDDLQGD 289
L+ME+GNVNSK VL LKVKSVLDPC DENDD+Q D
Sbjct: 210 LRMEIGNVNSKHLVLTLKVKSVLDPCEDENDDMQDD 245