BLASTX nr result

ID: Coptis25_contig00003256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003256
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319723.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-23
emb|CBI39045.3| unnamed protein product [Vitis vinifera]               91   2e-16
ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242...    91   2e-16
ref|XP_002525687.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002466459.1| hypothetical protein SORBIDRAFT_01g008120 [S...    76   4e-12

>ref|XP_002319723.1| predicted protein [Populus trichocarpa] gi|222858099|gb|EEE95646.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 82.0 bits (201), Expect(2) = 2e-23
 Identities = 39/51 (76%), Positives = 43/51 (84%)
 Frame = -3

Query: 615 AGFALRLINRKLDSGIPLASYIEAVKEGEEPISFGPNAVLVDYGYGWKLQT 463
           AGFA+ LINRKLD G P   +IEAVK+GEEPISFGP+AVLVDYG  WKLQT
Sbjct: 7   AGFAVSLINRKLDVGAPFVLHIEAVKDGEEPISFGPDAVLVDYGNDWKLQT 57



 Score = 52.8 bits (125), Expect(2) = 2e-23
 Identities = 25/55 (45%), Positives = 36/55 (65%)
 Frame = -2

Query: 358 TDNLQRSTSELKPHISFPYIGRIVLALTFIILLGVMFTLALENLPRLFLFVTSSM 194
           +D  + + +   P ISF Y+ +I++A   + +LG  FTLALENLPRL LF+ S M
Sbjct: 79  SDGSRPAKTATNPGISFLYMAKILVAFVLLFVLGASFTLALENLPRLILFINSFM 133


>emb|CBI39045.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -3

Query: 615 AGFALRLINRKLDSGIPLASYIEAVKEGEEPISFGPNAVLVDYGYGWKLQTV 460
           AGFA+ LIN+KLD G+PLA +IEAVKEGEEP+SFGPNAVLVDYG GWKL+TV
Sbjct: 43  AGFAIYLINKKLDIGLPLALHIEAVKEGEEPVSFGPNAVLVDYGDGWKLETV 94



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = -2

Query: 325 KPHISFPYIGRIVLALTFIILLGVMFTLALENLPRLFLFVTSSM 194
           +P ISF YIG+I +A+ FI  LG +FTLALENLPRL LF+ SSM
Sbjct: 133 QPVISFVYIGKIFIAIIFIFALGAVFTLALENLPRLILFINSSM 176


>ref|XP_002263534.1| PREDICTED: uncharacterized protein LOC100242796 [Vitis vinifera]
          Length = 175

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -3

Query: 615 AGFALRLINRKLDSGIPLASYIEAVKEGEEPISFGPNAVLVDYGYGWKLQTV 460
           AGFA+ LIN+KLD G+PLA +IEAVKEGEEP+SFGPNAVLVDYG GWKL+TV
Sbjct: 43  AGFAIYLINKKLDIGLPLALHIEAVKEGEEPVSFGPNAVLVDYGDGWKLETV 94



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = -2

Query: 325 KPHISFPYIGRIVLALTFIILLGVMFTLALENLPRLFLFVTSSM 194
           +P ISF YIG+I +A+ FI  LG +FTLALENLPRL LF+ SSM
Sbjct: 132 QPVISFVYIGKIFIAIIFIFALGAVFTLALENLPRLILFINSSM 175


>ref|XP_002525687.1| conserved hypothetical protein [Ricinus communis]
           gi|223534987|gb|EEF36670.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 122

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/52 (75%), Positives = 44/52 (84%)
 Frame = -3

Query: 615 AGFALRLINRKLDSGIPLASYIEAVKEGEEPISFGPNAVLVDYGYGWKLQTV 460
           AGFA+ LINRKL    PL S+IEA+K+GEEPISFGP+A LVDYG GWKLQTV
Sbjct: 42  AGFAVSLINRKLGIEDPLVSHIEAIKDGEEPISFGPDANLVDYGNGWKLQTV 93


>ref|XP_002466459.1| hypothetical protein SORBIDRAFT_01g008120 [Sorghum bicolor]
           gi|241920313|gb|EER93457.1| hypothetical protein
           SORBIDRAFT_01g008120 [Sorghum bicolor]
          Length = 181

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/52 (65%), Positives = 42/52 (80%)
 Frame = -3

Query: 615 AGFALRLINRKLDSGIPLASYIEAVKEGEEPISFGPNAVLVDYGYGWKLQTV 460
           A +AL  INRKLD G P A ++EAV++GEEP+SFGP+A L DYG GW+LQTV
Sbjct: 49  ARYALHAINRKLDPGAPPALHVEAVRDGEEPVSFGPSAALADYGRGWRLQTV 100


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