BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003245
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subun...   299   6e-79
ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycin...   297   3e-78
gb|AFK38601.1| unknown [Lotus japonicus]                              292   1e-76
ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subun...   286   7e-75
gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]        285   9e-75

>ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
           [Vitis vinifera] gi|359485224|ref|XP_003633238.1|
           PREDICTED: nuclear cap-binding protein subunit 2-like
           isoform 2 [Vitis vinifera]
           gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear
           cap-binding protein subunit 2-like isoform 3 [Vitis
           vinifera]
          Length = 253

 Score =  299 bits (766), Expect = 6e-79
 Identities = 154/239 (64%), Positives = 168/239 (70%)
 Frame = +1

Query: 259 MASLFKDPNKLSAYRDRRFPGSQEDFENALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 438
           MA LFKDP+KLSAYRD+RFPG+QEDFE+AL TS TVY+GNMSFYTTEEQVYELF+RAGEI
Sbjct: 1   MALLFKDPSKLSAYRDKRFPGTQEDFEHALLTSMTVYIGNMSFYTTEEQVYELFSRAGEI 60

Query: 439 KKIIMGLDKNTKTPCGFCFVLYYSRDDAEDSVKYVSGTILDDRPIRVDFDWGFXXXXXXX 618
           KKIIMGLDKN+KTPCGFCFVLYYSRDDAED+VKY+SGT+LDDRPIRVDFDWGF       
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSRDDAEDAVKYISGTVLDDRPIRVDFDWGFQEGRQWG 120

Query: 619 XXXXXXXVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGXXXXXXXXXXXXXXXXX 798
                  VRDEYRTDYDPGRGGYGKLVQ+ELEAQRQLVDY                    
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDY-------------------- 160

Query: 799 XXXXXXXXXXXXLVDYGTGSLGSFQQFMPSQYXXXXXXXXXXVPHRQNRDYHRKRQRDD 975
                           G+GSLGSF   MPSQY            +R +RDY RKR RDD
Sbjct: 161 ----------------GSGSLGSFPPVMPSQYGRHGGSQGHGGSNRHSRDYPRKRHRDD 203


>ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycine max]
           gi|255647255|gb|ACU24095.1| unknown [Glycine max]
          Length = 235

 Score =  297 bits (760), Expect = 3e-78
 Identities = 153/239 (64%), Positives = 164/239 (68%)
 Frame = +1

Query: 259 MASLFKDPNKLSAYRDRRFPGSQEDFENALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 438
           MA LFKDP+K+SAYRDRRFPG+QE+FE+AL TSTTVYVGNMSFYTTEEQVYELF+RAGEI
Sbjct: 1   MALLFKDPSKISAYRDRRFPGTQEEFEHALLTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 439 KKIIMGLDKNTKTPCGFCFVLYYSRDDAEDSVKYVSGTILDDRPIRVDFDWGFXXXXXXX 618
           KKIIMGLDKNTKTPCGFCFVLYYSR+D ED  KY+SGTILDDRPIRVDFDWGF       
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLYYSREDTEDVCKYISGTILDDRPIRVDFDWGFQDGRQWG 120

Query: 619 XXXXXXXVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGXXXXXXXXXXXXXXXXX 798
                  VRDEYRTDYDPGRGGYGKLVQKELE QRQLVDY                    
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEVQRQLVDY-------------------- 160

Query: 799 XXXXXXXXXXXXLVDYGTGSLGSFQQFMPSQYXXXXXXXXXXVPHRQNRDYHRKRQRDD 975
                           GTGSLGSF   +P+ Y            HR  RDY+RKR RDD
Sbjct: 161 ----------------GTGSLGSFPPVIPTSYGRHGGGHGHGGSHRHGRDYYRKRHRDD 203


>gb|AFK38601.1| unknown [Lotus japonicus]
          Length = 253

 Score =  292 bits (747), Expect = 1e-76
 Identities = 152/239 (63%), Positives = 162/239 (67%)
 Frame = +1

Query: 259 MASLFKDPNKLSAYRDRRFPGSQEDFENALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 438
           MA+LFKD  KLSAYRDRRFPG+Q++FE AL  STTVYVGNMSFYTTEEQVYELF+RAGEI
Sbjct: 1   MATLFKDLTKLSAYRDRRFPGTQDEFEQALLASTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 439 KKIIMGLDKNTKTPCGFCFVLYYSRDDAEDSVKYVSGTILDDRPIRVDFDWGFXXXXXXX 618
           KKIIMGLDKNTKTPCGFCFVLYYSR+D ED+ KYVSGTILDDRPIRVDFDWGF       
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLYYSREDTEDACKYVSGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 619 XXXXXXXVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGXXXXXXXXXXXXXXXXX 798
                  VRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDY                    
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDY-------------------- 160

Query: 799 XXXXXXXXXXXXLVDYGTGSLGSFQQFMPSQYXXXXXXXXXXVPHRQNRDYHRKRQRDD 975
                           G+GSLGSF   + + Y            HR  RDYHRKR RDD
Sbjct: 161 ----------------GSGSLGSFPPMVSTSYGRHGRNHGHGGSHRPGRDYHRKRHRDD 203


>ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
           sativus] gi|449476391|ref|XP_004154724.1| PREDICTED:
           nuclear cap-binding protein subunit 2-like [Cucumis
           sativus]
          Length = 251

 Score =  286 bits (731), Expect = 7e-75
 Identities = 156/240 (65%), Positives = 164/240 (68%), Gaps = 1/240 (0%)
 Frame = +1

Query: 259 MASLFKDPNKLSAYRDRRFPGSQEDFENALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 438
           MASLFKDP KLS YRDRRF GSQ++FE ALQTSTTVYVGNMSFYTTEEQVYELF+RAGEI
Sbjct: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 439 KKIIMGLDKNTKTPCGFCFVLYYSRDDAEDSVKYVSGTILDDRPIRVDFDWGFXXXXXXX 618
           KKIIMGLDKN+KTPCGFCFVLYYSR+D ED+VKY+SGTILDDRPIRVDFDWGF       
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120

Query: 619 XXXXXXXVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGXXXXXXXXXXXXXXXXX 798
                  VRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDY                    
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDY-------------------- 160

Query: 799 XXXXXXXXXXXXLVDYGTGSLGSFQQFMPSQYXXXXXXXXXXVPHRQNRDY-HRKRQRDD 975
                           GTGSLGS    MP QY            +R  RDY HRKR RDD
Sbjct: 161 ----------------GTGSLGSMAPVMP-QYGKHGGSHGHG--NRHGRDYHHRKRYRDD 201


>gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]
          Length = 255

 Score =  285 bits (730), Expect = 9e-75
 Identities = 149/241 (61%), Positives = 165/241 (68%), Gaps = 2/241 (0%)
 Frame = +1

Query: 259 MASLFKDPNKLSAYRDRRFPGSQEDFENALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 438
           MASLFKD  K+SAYRDRRFPG+QE+FE+AL  S TVYVGNMSFYTTEEQVYELF+RAGEI
Sbjct: 1   MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 439 KKIIMGLDKNTKTPCGFCFVLYYSRDDAEDSVKYVSGTILDDRPIRVDFDWGFXXXXXXX 618
           KKI+MGLDKN+KTPCGFCF++YYSRDDAEDSVKY+SGTILDDRPIRVDFDWGF       
Sbjct: 61  KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 619 XXXXXXXVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGXXXXXXXXXXXXXXXXX 798
                  VRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDY                    
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDY-------------------- 160

Query: 799 XXXXXXXXXXXXLVDYGTGSLGSFQQFMPSQY--XXXXXXXXXXVPHRQNRDYHRKRQRD 972
                           GTGSLG++   MPS +              +R  R+YHRKR R+
Sbjct: 161 ----------------GTGSLGAYPPVMPSPHYGRHNGGNHGRGGSYRHGREYHRKRHRE 204

Query: 973 D 975
           D
Sbjct: 205 D 205