BLASTX nr result

ID: Coptis25_contig00003239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003239
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35670.3| unnamed protein product [Vitis vinifera]              237   2e-75
ref|XP_002512660.1| conserved hypothetical protein [Ricinus comm...   228   5e-75
ref|XP_002267301.1| PREDICTED: uncharacterized protein LOC100257...   222   8e-71
ref|XP_002304643.1| predicted protein [Populus trichocarpa] gi|2...   214   5e-69
ref|XP_004170128.1| PREDICTED: uncharacterized LOC101205665 [Cuc...   200   4e-65

>emb|CBI35670.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score =  237 bits (605), Expect(2) = 2e-75
 Identities = 118/168 (70%), Positives = 133/168 (79%)
 Frame = +3

Query: 345 GIDPSSDVLGRIQMKYVEDDEGIKKYFASFHLHQNFPSAVIVDDFGDFFNESTCQERYGN 524
           G+DPSSD+   IQMKYVEDDE IKKYFA+FHLH  FP AVI+DDFGDFF+E TCQERY +
Sbjct: 73  GVDPSSDMFQHIQMKYVEDDEAIKKYFAAFHLHHKFPVAVIIDDFGDFFDERTCQERYNS 132

Query: 525 QRGRDLAIVRTLALCQNAITHANERLELELQFPCKLLLSDTQHGDTPRLLFIYKRWITSI 704
            RGRDLA+VRTLALC++AI HAN+        PCK+LLSDT HGD+PRLLFIYKRWI SI
Sbjct: 133 PRGRDLAMVRTLALCRSAILHANKTA------PCKVLLSDTHHGDSPRLLFIYKRWIPSI 186

Query: 705 FTIKGDGMGSFLLRNNTTSSSQGESGGKEAAKYSIALQYLVLEDFLDE 848
           FTIKGDG GSFLL N   S S G SG +  AKYSIALQYL LED  ++
Sbjct: 187 FTIKGDGSGSFLLTNGINSGS-GSSGRRRTAKYSIALQYLFLEDVTED 233



 Score = 72.4 bits (176), Expect(2) = 2e-75
 Identities = 43/77 (55%), Positives = 49/77 (63%)
 Frame = +1

Query: 28  MVERFFSTTKQRYQIDVDQQHDPSIMLLSGPPSCGKTSLLFQFAINIASQNISSNAHYVV 207
           MVERFFS        +   +   +  LLSGPPSCGKTSLLFQFA N A +  S N   VV
Sbjct: 1   MVERFFSGKIT----ETAGEDAGNFTLLSGPPSCGKTSLLFQFAFNAAVEGHSGNRD-VV 55

Query: 208 FITNQRKLECKPPYLSQ 258
           FI  +R+LE KPPYLSQ
Sbjct: 56  FICTRRRLESKPPYLSQ 72


>ref|XP_002512660.1| conserved hypothetical protein [Ricinus communis]
           gi|223548621|gb|EEF50112.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 239

 Score =  228 bits (580), Expect(2) = 5e-75
 Identities = 111/170 (65%), Positives = 134/170 (78%)
 Frame = +3

Query: 345 GIDPSSDVLGRIQMKYVEDDEGIKKYFASFHLHQNFPSAVIVDDFGDFFNESTCQERYGN 524
           GIDPSS    RIQMKYV+DDEG+KKYFA+FH++  FPSAVI+DDFGDFFN+ +CQERY N
Sbjct: 74  GIDPSSGTFQRIQMKYVDDDEGVKKYFAAFHMYDAFPSAVIIDDFGDFFNQRSCQERYEN 133

Query: 525 QRGRDLAIVRTLALCQNAITHANERLELELQFPCKLLLSDTQHGDTPRLLFIYKRWITSI 704
            RGRDLA+VR LALC NA+ HANE+        CKLLLSDT HGD+PRLLFIYKRW+++I
Sbjct: 134 PRGRDLAMVRILALCHNAVMHANEKGH------CKLLLSDTHHGDSPRLLFIYKRWVSAI 187

Query: 705 FTIKGDGMGSFLLRNNTTSSSQGESGGKEAAKYSIALQYLVLEDFLDEAE 854
           FTIKGDG GSFLLR N+  +S+  S    +AKYS+ALQ+L LE   ++ E
Sbjct: 188 FTIKGDGQGSFLLRRNSNLASE-NSERSRSAKYSVALQFLYLERIFEDDE 236



 Score = 80.9 bits (198), Expect(2) = 5e-75
 Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
 Frame = +1

Query: 28  MVERFFSTTKQRYQIDVDQQHD--PSIMLLSGPPSCGKTSLLFQFAINIASQNISSNAHY 201
           MVE+FF       Q+D+ +QH     IMLLSGPPSCGKTSLLFQFA N A     SN+  
Sbjct: 1   MVEQFFPGG----QLDLSRQHSLPTPIMLLSGPPSCGKTSLLFQFAYNAAIDERGSNS-- 54

Query: 202 VVFITNQRKLECKPPYLSQ 258
           VVFI N+RKL+ KPP+LSQ
Sbjct: 55  VVFICNRRKLDTKPPFLSQ 73


>ref|XP_002267301.1| PREDICTED: uncharacterized protein LOC100257492 [Vitis vinifera]
          Length = 231

 Score =  222 bits (566), Expect(2) = 8e-71
 Identities = 114/168 (67%), Positives = 129/168 (76%)
 Frame = +3

Query: 345 GIDPSSDVLGRIQMKYVEDDEGIKKYFASFHLHQNFPSAVIVDDFGDFFNESTCQERYGN 524
           G+DPSSD+   IQMKYVEDDE IKKYFA+FHLH  FP AVI+DDFGDFF+     ERY +
Sbjct: 73  GVDPSSDMFQHIQMKYVEDDEAIKKYFAAFHLHHKFPVAVIIDDFGDFFD-----ERYNS 127

Query: 525 QRGRDLAIVRTLALCQNAITHANERLELELQFPCKLLLSDTQHGDTPRLLFIYKRWITSI 704
            RGRDLA+VRTLALC++AI HAN+        PCK+LLSDT HGD+PRLLFIYKRWI SI
Sbjct: 128 PRGRDLAMVRTLALCRSAILHANKTA------PCKVLLSDTHHGDSPRLLFIYKRWIPSI 181

Query: 705 FTIKGDGMGSFLLRNNTTSSSQGESGGKEAAKYSIALQYLVLEDFLDE 848
           FTIKGDG GSFLL N   S S G SG +  AKYSIALQYL LED  ++
Sbjct: 182 FTIKGDGSGSFLLTNGINSGS-GSSGRRRTAKYSIALQYLFLEDVTED 228



 Score = 72.4 bits (176), Expect(2) = 8e-71
 Identities = 43/77 (55%), Positives = 49/77 (63%)
 Frame = +1

Query: 28  MVERFFSTTKQRYQIDVDQQHDPSIMLLSGPPSCGKTSLLFQFAINIASQNISSNAHYVV 207
           MVERFFS        +   +   +  LLSGPPSCGKTSLLFQFA N A +  S N   VV
Sbjct: 1   MVERFFSGKIT----ETAGEDAGNFTLLSGPPSCGKTSLLFQFAFNAAVEGHSGNRD-VV 55

Query: 208 FITNQRKLECKPPYLSQ 258
           FI  +R+LE KPPYLSQ
Sbjct: 56  FICTRRRLESKPPYLSQ 72


>ref|XP_002304643.1| predicted protein [Populus trichocarpa] gi|222842075|gb|EEE79622.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  214 bits (546), Expect(2) = 5e-69
 Identities = 106/170 (62%), Positives = 127/170 (74%)
 Frame = +3

Query: 345 GIDPSSDVLGRIQMKYVEDDEGIKKYFASFHLHQNFPSAVIVDDFGDFFNESTCQERYGN 524
           GI PSSD+  RIQMKYVEDDEGIKKYFA+FHLH  FP +V+VDDFGDFF E  CQERYGN
Sbjct: 80  GIQPSSDIFKRIQMKYVEDDEGIKKYFAAFHLHDTFPLSVVVDDFGDFFYERKCQERYGN 139

Query: 525 QRGRDLAIVRTLALCQNAITHANERLELELQFPCKLLLSDTQHGDTPRLLFIYKRWITSI 704
            RGRDLA+VR LALC NA+  +N++        CKLL+SDT HGD+PRLLF+YKRW+ SI
Sbjct: 140 PRGRDLALVRILALCHNAVMSSNDKGH------CKLLISDTHHGDSPRLLFLYKRWVPSI 193

Query: 705 FTIKGDGMGSFLLRNNTTSSSQGESGGKEAAKYSIALQYLVLEDFLDEAE 854
           FTIKGDG GSFLL++ +   S      K  AKYS+  Q L+LE  +++ E
Sbjct: 194 FTIKGDGNGSFLLKSYSNVGSDSTEKMK-IAKYSLVYQRLLLEGIIEDEE 242



 Score = 73.9 bits (180), Expect(2) = 5e-69
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
 Frame = +1

Query: 28  MVERFFSTTKQRYQI----DVDQQHDPSIMLLSGPPSCGKTSLLFQFAINIASQNISSNA 195
           MVE FFSTT+  +       + Q      MLLSGPPSCGKTSLLFQFA N+A +  + + 
Sbjct: 1   MVEAFFSTTQMDFDFAHHHSLSQSQSHPFMLLSGPPSCGKTSLLFQFAYNVALE--AEDD 58

Query: 196 HYVVFITNQRKLECKPPYLSQ 258
             VVFI ++ ++E  PP+LSQ
Sbjct: 59  RKVVFICHRSRIESAPPFLSQ 79


>ref|XP_004170128.1| PREDICTED: uncharacterized LOC101205665 [Cucumis sativus]
          Length = 290

 Score =  200 bits (508), Expect(2) = 4e-65
 Identities = 97/169 (57%), Positives = 125/169 (73%)
 Frame = +3

Query: 345 GIDPSSDVLGRIQMKYVEDDEGIKKYFASFHLHQNFPSAVIVDDFGDFFNESTCQERYGN 524
           G+DP+S+   RIQMKY+EDD+GIKKYF++FHLH   P AV++DDFGDFF E  CQE+Y N
Sbjct: 129 GVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYAN 188

Query: 525 QRGRDLAIVRTLALCQNAITHANERLELELQFPCKLLLSDTQHGDTPRLLFIYKRWITSI 704
            RGRDLA+VRTLALCQNA++ A          PC+L+LSDT HG++PRL+FIYKRW+ +I
Sbjct: 189 PRGRDLAMVRTLALCQNAVSLAK---------PCQLVLSDTHHGESPRLIFIYKRWVPTI 239

Query: 705 FTIKGDGMGSFLLRNNTTSSSQGESGGKEAAKYSIALQYLVLEDFLDEA 851
           FTI+GDG G F+LR+            K  AKYSIALQ+L LE+  +++
Sbjct: 240 FTIRGDGAGWFILRSINNCGIDCCLRTKR-AKYSIALQFLSLEEISEDS 287



 Score = 75.5 bits (184), Expect(2) = 4e-65
 Identities = 44/85 (51%), Positives = 51/85 (60%)
 Frame = +1

Query: 4   TIFIKKKNMVERFFSTTKQRYQIDVDQQHDPSIMLLSGPPSCGKTSLLFQFAINIASQNI 183
           T F    N +E+FFS      QI    +   SI L+SGPPSCGKTSLLFQFA N+  +  
Sbjct: 54  TSFPSSSNKMEKFFSVQ----QIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEG- 108

Query: 184 SSNAHYVVFITNQRKLECKPPYLSQ 258
                 V FI N+RKLE KPPYLSQ
Sbjct: 109 -----NVTFICNRRKLENKPPYLSQ 128


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