BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003237
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   174   7e-42
ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p...   174   9e-42
ref|XP_002516906.1| 60S ribosome subunit biogenesis protein NIP7...   167   1e-39
ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p...   165   4e-39
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   165   4e-39

>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/98 (84%), Positives = 91/98 (92%)
 Frame = +2

Query: 2   QKNKVFYVSESLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWL 181
           QKN+V+YVSESLVKRATNI R +L+SLGTCIGKFTKGGKFHLT+Q +NLLA NAKHKVWL
Sbjct: 48  QKNRVYYVSESLVKRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWL 107

Query: 182 KPSSEMSFLYGNHVLKGGLGRITENTSTGDGVVVFSMS 295
           KP+SEMSFLYGNHVLKGGLGRITEN   GDG+VVFSMS
Sbjct: 108 KPTSEMSFLYGNHVLKGGLGRITENIVAGDGIVVFSMS 145


>ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera]
          Length = 187

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/98 (84%), Positives = 91/98 (92%)
 Frame = +2

Query: 2   QKNKVFYVSESLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWL 181
           QKN+V+YVSES+VKRATNI R +L+SLGTCIGKFTKGGKFHLT+Q +NLLA NAKHKVWL
Sbjct: 48  QKNRVYYVSESMVKRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWL 107

Query: 182 KPSSEMSFLYGNHVLKGGLGRITENTSTGDGVVVFSMS 295
           KP+SEMSFLYGNHVLKGGLGRITEN   GDGVVVFSMS
Sbjct: 108 KPTSEMSFLYGNHVLKGGLGRITENIVAGDGVVVFSMS 145


>ref|XP_002516906.1| 60S ribosome subunit biogenesis protein NIP7, putative [Ricinus
           communis] gi|223543994|gb|EEF45520.1| 60S ribosome
           subunit biogenesis protein NIP7, putative [Ricinus
           communis]
          Length = 187

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/97 (84%), Positives = 87/97 (89%)
 Frame = +2

Query: 5   KNKVFYVSESLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLK 184
           KN+V+YVSESLVKRATNISR+ L SLGTCIGKFT GG FHLTIQ LNLLA NAKHKVWLK
Sbjct: 49  KNRVYYVSESLVKRATNISRKNLASLGTCIGKFTHGGSFHLTIQALNLLAANAKHKVWLK 108

Query: 185 PSSEMSFLYGNHVLKGGLGRITENTSTGDGVVVFSMS 295
           P+SEMSFLYGNHVLKGGLGRIT+  S  DGVVVFSMS
Sbjct: 109 PTSEMSFLYGNHVLKGGLGRITDTISKNDGVVVFSMS 145


>ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/97 (80%), Positives = 87/97 (89%)
 Frame = +2

Query: 5   KNKVFYVSESLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLK 184
           KNKV+YVS+SLVKRATN++R  L+SLGTCIGKFT GG FHLT+Q L LL+ NAKHKVWLK
Sbjct: 49  KNKVYYVSDSLVKRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLK 108

Query: 185 PSSEMSFLYGNHVLKGGLGRITENTSTGDGVVVFSMS 295
           P+SEMSFLYGNHVLKGGLGRITEN   GDGVVV+SMS
Sbjct: 109 PTSEMSFLYGNHVLKGGLGRITENIVPGDGVVVYSMS 145


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/97 (80%), Positives = 87/97 (89%)
 Frame = +2

Query: 5   KNKVFYVSESLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLK 184
           KNKV+YVS+SLVKRATN++R  L+SLGTCIGKFT GG FHLT+Q L LL+ NAKHKVWLK
Sbjct: 49  KNKVYYVSDSLVKRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLK 108

Query: 185 PSSEMSFLYGNHVLKGGLGRITENTSTGDGVVVFSMS 295
           P+SEMSFLYGNHVLKGGLGRITEN   GDGVVV+SMS
Sbjct: 109 PTSEMSFLYGNHVLKGGLGRITENIVPGDGVVVYSMS 145