BLASTX nr result

ID: Coptis25_contig00003229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003229
         (1593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301849.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51
ref|XP_002282135.2| PREDICTED: uncharacterized protein LOC100261...   207   5e-51
emb|CBI23722.3| unnamed protein product [Vitis vinifera]              207   5e-51
ref|XP_002528348.1| o-linked n-acetylglucosamine transferase, og...   186   1e-44
gb|AFK34172.1| unknown [Lotus japonicus]                              176   1e-41

>ref|XP_002301849.1| predicted protein [Populus trichocarpa] gi|222843575|gb|EEE81122.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  209 bits (533), Expect = 1e-51
 Identities = 139/355 (39%), Positives = 178/355 (50%), Gaps = 18/355 (5%)
 Frame = +2

Query: 317  MLLRSSSTPILGSLLSSLSETPNRDFDATNNNINKPSLSNSG--HKRLSFLHGAHPXXXX 490
            MLLRSSSTP+LGSLLSS S++PN      +++IN P+  +S   H+ ++ L         
Sbjct: 1    MLLRSSSTPVLGSLLSSFSDSPNNSSSNHHHDIN-PTFKHSPIHHQSINKLPYHQTGCFC 59

Query: 491  XXXXXXXXXXXXDIDQETNTGSLGGLRRAQSAGNLEGLIDM-----DEFHTSNKPSLRSS 655
                            E +  S  G RRAQS GNL+GL+D      D  H +   + + S
Sbjct: 60   LSTISCNSSPISPSISEFSGRSHQGFRRAQSEGNLQGLLDYSSNNNDAQHYNPNQTRKVS 119

Query: 656  RKPHHSVLQTIPSFSVYSTRNXXXXXXXXXXXXXXXXXXXKYGFLKRAITIGDNINGEFS 835
             +    +L+TIPSFS  + R                    +   L+  +      NG F 
Sbjct: 120  GRSKCLMLETIPSFSYSTLRGRYEDEDEEDEDQSDVQDEEERAELEENVAAE---NGHFG 176

Query: 836  FGKNMDLVMXXXXXXXXXXXXXXXXXXXXXPKSPPLYLAKXXXXXXXXXXXXX------- 994
                M+ ++                       S  ++LA+                    
Sbjct: 177  LSNKMENMVLTEEVRVMDRIWSVNFEGKREWISEEMHLARGPGIDYGSNGNGGGGGYGGR 236

Query: 995  ----SIQEIGGGDRDNSSMEEYYKEMVEENPGNSLFLRNYAQFLYQSKGDLQRAEEYYSR 1162
                S  E   G  D    EEYYK+MV+ENPGN LFLRNYAQFLYQ+K DLQ AEEYYSR
Sbjct: 237  SGGGSGDEFDSGGGDMHGTEEYYKKMVQENPGNPLFLRNYAQFLYQTKRDLQGAEEYYSR 296

Query: 1163 AILSDPGDGEMLSQYAKIVWELHHDHERASSYFERAVQVAPQDSHVHAAYASFLW 1327
            AIL+DP DGE+LSQY K+VWELH D +RASSYFER VQ +P+D HVHAAYASFLW
Sbjct: 297  AILADPKDGEILSQYGKLVWELHQDQDRASSYFERGVQASPEDCHVHAAYASFLW 351


>ref|XP_002282135.2| PREDICTED: uncharacterized protein LOC100261301 [Vitis vinifera]
          Length = 492

 Score =  207 bits (528), Expect = 5e-51
 Identities = 149/352 (42%), Positives = 188/352 (53%), Gaps = 15/352 (4%)
 Frame = +2

Query: 317  MLLRSSSTPILGS-LLSSLSETPNRDFDATN--NNINKPSLSNSGHKRLSFLHGAHPXXX 487
            MLLRSSSTP+LG+ LLS  SE+P+RD ++++  N   K + S+SGH  LSF         
Sbjct: 1    MLLRSSSTPVLGTTLLSPFSESPSRDSESSSHGNPTTKITFSHSGH--LSF--------- 49

Query: 488  XXXXXXXXXXXXXDIDQETNTG-SLGGLRRAQSAGNLEGL----IDMDEFHTS-NKPSLR 649
                           DQE N+  +  G RR++S GNLEGL     D++EF  S +  S +
Sbjct: 50   -PLFSCNSSPLPHSFDQEPNSSINPKGFRRSRSEGNLEGLGHSSFDLEEFRRSESNTSKK 108

Query: 650  SSRKPHHSVLQTIPSFSVYSTRNXXXXXXXXXXXXXXXXXXXKYGFLKRAITIGDNING- 826
               K H ++L+T PSFS+Y+                          L+R ITI ++I G 
Sbjct: 109  YFDKTHKAMLETTPSFSIYNLTQGVEGEEGSQQEEIEGEVFV----LERTITIEESIRGT 164

Query: 827  ---EFSFG-KNMDLVMXXXXXXXXXXXXXXXXXXXXXPKSPPLYLAKXXXXXXXXXXXXX 994
               EFSFG K M L+                      P SP +YLA              
Sbjct: 165  TSREFSFGRKTMGLIEEEEEEEDVNGFQKLGVEDGVEPVSPLMYLATGLGMDGAGFGGGR 224

Query: 995  SIQEIGGGDRDNSS-MEEYYKEMVEENPGNSLFLRNYAQFLYQSKGDLQRAEEYYSRAIL 1171
               +    D D S  +EEYY+ MV E+P N LFLRNYAQ L QSKGDLQRAEEYYSRA L
Sbjct: 225  V--DFAAADFDESGDVEEYYRRMVNEDPCNPLFLRNYAQLL-QSKGDLQRAEEYYSRATL 281

Query: 1172 SDPGDGEMLSQYAKIVWELHHDHERASSYFERAVQVAPQDSHVHAAYASFLW 1327
            +DP DGE+L QYAK++W++H D  RA SYFERA +VA  DSHV AA ASFLW
Sbjct: 282  ADPQDGEILMQYAKLIWDVHRDQARALSYFERAAKVASDDSHVLAANASFLW 333



 Score =  160 bits (406), Expect = 7e-37
 Identities = 73/99 (73%), Positives = 88/99 (88%)
 Frame = +2

Query: 1031 SSMEEYYKEMVEENPGNSLFLRNYAQFLYQSKGDLQRAEEYYSRAILSDPGDGEMLSQYA 1210
            S +EE+YK+MVEENP N LFLRNYAQFL+Q+KG+LQ+AEEYYSRAIL+DPGDGE++SQYA
Sbjct: 363  SKVEEHYKKMVEENPCNPLFLRNYAQFLFQTKGELQQAEEYYSRAILADPGDGEIMSQYA 422

Query: 1211 KIVWELHHDHERASSYFERAVQVAPQDSHVHAAYASFLW 1327
            K+ WELHHD ++A SYF++AVQ  P DSHV AAYA FLW
Sbjct: 423  KLAWELHHDRDKALSYFKQAVQATPGDSHVLAAYARFLW 461


>emb|CBI23722.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  207 bits (528), Expect = 5e-51
 Identities = 149/352 (42%), Positives = 188/352 (53%), Gaps = 15/352 (4%)
 Frame = +2

Query: 317  MLLRSSSTPILGS-LLSSLSETPNRDFDATN--NNINKPSLSNSGHKRLSFLHGAHPXXX 487
            MLLRSSSTP+LG+ LLS  SE+P+RD ++++  N   K + S+SGH  LSF         
Sbjct: 1    MLLRSSSTPVLGTTLLSPFSESPSRDSESSSHGNPTTKITFSHSGH--LSF--------- 49

Query: 488  XXXXXXXXXXXXXDIDQETNTG-SLGGLRRAQSAGNLEGL----IDMDEFHTS-NKPSLR 649
                           DQE N+  +  G RR++S GNLEGL     D++EF  S +  S +
Sbjct: 50   -PLFSCNSSPLPHSFDQEPNSSINPKGFRRSRSEGNLEGLGHSSFDLEEFRRSESNTSKK 108

Query: 650  SSRKPHHSVLQTIPSFSVYSTRNXXXXXXXXXXXXXXXXXXXKYGFLKRAITIGDNING- 826
               K H ++L+T PSFS+Y+                          L+R ITI ++I G 
Sbjct: 109  YFDKTHKAMLETTPSFSIYNLTQGVEGEEGSQQEEIEGEVFV----LERTITIEESIRGT 164

Query: 827  ---EFSFG-KNMDLVMXXXXXXXXXXXXXXXXXXXXXPKSPPLYLAKXXXXXXXXXXXXX 994
               EFSFG K M L+                      P SP +YLA              
Sbjct: 165  TSREFSFGRKTMGLIEEEEEEEDVNGFQKLGVEDGVEPVSPLMYLATGLGMDGAGFGGGR 224

Query: 995  SIQEIGGGDRDNSS-MEEYYKEMVEENPGNSLFLRNYAQFLYQSKGDLQRAEEYYSRAIL 1171
               +    D D S  +EEYY+ MV E+P N LFLRNYAQ L QSKGDLQRAEEYYSRA L
Sbjct: 225  V--DFAAADFDESGDVEEYYRRMVNEDPCNPLFLRNYAQLL-QSKGDLQRAEEYYSRATL 281

Query: 1172 SDPGDGEMLSQYAKIVWELHHDHERASSYFERAVQVAPQDSHVHAAYASFLW 1327
            +DP DGE+L QYAK++W++H D  RA SYFERA +VA  DSHV AA ASFLW
Sbjct: 282  ADPQDGEILMQYAKLIWDVHRDQARALSYFERAAKVASDDSHVLAANASFLW 333



 Score =  160 bits (406), Expect = 7e-37
 Identities = 73/99 (73%), Positives = 88/99 (88%)
 Frame = +2

Query: 1031 SSMEEYYKEMVEENPGNSLFLRNYAQFLYQSKGDLQRAEEYYSRAILSDPGDGEMLSQYA 1210
            S +EE+YK+MVEENP N LFLRNYAQFL+Q+KG+LQ+AEEYYSRAIL+DPGDGE++SQYA
Sbjct: 402  SKVEEHYKKMVEENPCNPLFLRNYAQFLFQTKGELQQAEEYYSRAILADPGDGEIMSQYA 461

Query: 1211 KIVWELHHDHERASSYFERAVQVAPQDSHVHAAYASFLW 1327
            K+ WELHHD ++A SYF++AVQ  P DSHV AAYA FLW
Sbjct: 462  KLAWELHHDRDKALSYFKQAVQATPGDSHVLAAYARFLW 500


>ref|XP_002528348.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus
            communis] gi|223532216|gb|EEF34020.1| o-linked
            n-acetylglucosamine transferase, ogt, putative [Ricinus
            communis]
          Length = 502

 Score =  186 bits (473), Expect = 1e-44
 Identities = 139/371 (37%), Positives = 180/371 (48%), Gaps = 34/371 (9%)
 Frame = +2

Query: 317  MLLRSSSTPILGSLLS--SLSETPNRDFDATNNNINKPSLSNSGHKRLSFLHGAHPXXXX 490
            M+LRSSS P+ G+ LS  S S++PNRDF                H +LS  HG H     
Sbjct: 1    MILRSSSNPVTGTFLSPFSSSDSPNRDFH--------------DHNKLSSSHGFH---HL 43

Query: 491  XXXXXXXXXXXXDIDQETNTGSLGGLRRAQSAGNLEGLI----------DMDEFHTSNKP 640
                         I +  ++  LGG RRA S  NLE  +          ++  F TS+ P
Sbjct: 44   NLTPISCTNSSSPISEHNDSFRLGGFRRAWSDSNLEKFVYPSSSSDHKEELQNF-TSHTP 102

Query: 641  SLRSSRKPHHSVLQTIPSFSVYSTRNXXXXXXXXXXXXXXXXXXXKYGFLKRAITIGDNI 820
              R +++ + ++LQT PSFS+++  +                       L R +TIGD I
Sbjct: 103  K-RFTKRNYTTMLQTAPSFSIFNVNDHELQDQEKNGVEEEERG------LMRTVTIGDII 155

Query: 821  ----NGEFSFGK-NMDLVMXXXXXXXXXXXXXXXXXXXXX----PKSPPLYLAKXXXXXX 973
                NGE SF K +M L+                          P SPP+YLA       
Sbjct: 156  EGTSNGELSFEKKSMGLIEEEGEEEQDQEVMNEIENLNLENVKEPVSPPMYLASGLGIDG 215

Query: 974  XXXXXXXSIQEIGGGDR-------------DNSSMEEYYKEMVEENPGNSLFLRNYAQFL 1114
                      + GGG R             ++  +EEYYK MV+E P + LFL NYAQ L
Sbjct: 216  I---------DFGGGGRGGGGFDSTLPNFDESDDLEEYYKRMVDEFPCHPLFLANYAQLL 266

Query: 1115 YQSKGDLQRAEEYYSRAILSDPGDGEMLSQYAKIVWELHHDHERASSYFERAVQVAPQDS 1294
             QSKGDL  AEEYY RA ++DP DGE+L +YAK+ W+LHHD +RA S FERA+Q APQDS
Sbjct: 267  -QSKGDLHGAEEYYYRATVADPEDGEILMKYAKLEWQLHHDQDRAWSNFERAIQAAPQDS 325

Query: 1295 HVHAAYASFLW 1327
            HV AAYASFLW
Sbjct: 326  HVLAAYASFLW 336



 Score =  156 bits (395), Expect = 1e-35
 Identities = 73/98 (74%), Positives = 88/98 (89%)
 Frame = +2

Query: 1034 SMEEYYKEMVEENPGNSLFLRNYAQFLYQSKGDLQRAEEYYSRAILSDPGDGEMLSQYAK 1213
            ++EEYYK+MVEENP NSL LRNYAQFLYQ+KGD++ AEEYYSRA+L+DPGDGE+ SQYAK
Sbjct: 375  AVEEYYKKMVEENPSNSLVLRNYAQFLYQAKGDIRGAEEYYSRALLADPGDGEIKSQYAK 434

Query: 1214 IVWELHHDHERASSYFERAVQVAPQDSHVHAAYASFLW 1327
            +VWEL  D ++ASSYFE+AVQ AP +S+V AAYASFLW
Sbjct: 435  LVWELGRDRDKASSYFEQAVQAAPGNSNVLAAYASFLW 472


>gb|AFK34172.1| unknown [Lotus japonicus]
          Length = 167

 Score =  176 bits (447), Expect = 1e-41
 Identities = 82/106 (77%), Positives = 92/106 (86%)
 Frame = +2

Query: 1010 GGGDRDNSSMEEYYKEMVEENPGNSLFLRNYAQFLYQSKGDLQRAEEYYSRAILSDPGDG 1189
            GG D D   +EEYYK+MVEE+PG+ LFLRNYAQFLYQ K DL+ AEEYYSRAIL+DP DG
Sbjct: 36   GGNDGDMHGVEEYYKKMVEESPGDPLFLRNYAQFLYQCKHDLKGAEEYYSRAILADPKDG 95

Query: 1190 EMLSQYAKIVWELHHDHERASSYFERAVQVAPQDSHVHAAYASFLW 1327
            E+LSQY K+VWELHHD ERASSYFERA Q +P+DSHVHAAYASFLW
Sbjct: 96   EVLSQYGKLVWELHHDEERASSYFERAAQASPEDSHVHAAYASFLW 141


Top