BLASTX nr result

ID: Coptis25_contig00003224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003224
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD11808.1| syntaxin-related protein Nt-syr1 [Nicotiana tabacum]   369   e-100
ref|XP_002524068.1| syntaxin, putative [Ricinus communis] gi|223...   369   1e-99
ref|XP_002263986.1| PREDICTED: syntaxin-121-like [Vitis vinifera]     367   3e-99
ref|XP_003519112.1| PREDICTED: syntaxin-121-like [Glycine max]        367   4e-99
ref|XP_004136519.1| PREDICTED: syntaxin-121-like [Cucumis sativus]    360   3e-97

>gb|AAD11808.1| syntaxin-related protein Nt-syr1 [Nicotiana tabacum]
          Length = 300

 Score =  369 bits (947), Expect = e-100
 Identities = 183/280 (65%), Positives = 234/280 (83%), Gaps = 6/280 (2%)
 Frame = -1

Query: 976 MNDLLPRSFSPSR----EDANSVEMRSI--GISLDKFFEDIEGIKGELKEVEKLHQKLQA 815
           MNDL   SFS  R     D++++EM  I  G++LDKFFED+E IK ELK +EK++ +LQ+
Sbjct: 1   MNDLFSGSFSRFRADDQSDSHAIEMGDITGGVNLDKFFEDVEAIKDELKGLEKIYSQLQS 60

Query: 814 SHEESKTLHNAKSIKNLRSRMDADVXXXXXXXXXXXXXLESIDRANAANRNLPGCGPGSS 635
           SHE+SKTLHNAK++K+LRS MD DV             LE++DR+NAANR+LPGCGPGSS
Sbjct: 61  SHEKSKTLHNAKAVKDLRSNMDNDVSMALKKAKFIKVRLEALDRSNAANRSLPGCGPGSS 120

Query: 634 SDRTRTSIVNGLKKKLIESMENFNKLRQQIALEYKETVERRYYTVTGEKPDDQTVEDLIS 455
           SDRTRTS+VNGL+KKL ESM  FN+LRQ++A EY+ETV+RRYYTVTGE PD+  ++ LIS
Sbjct: 121 SDRTRTSVVNGLRKKLQESMNQFNELRQKMASEYRETVQRRYYTVTGENPDEAVLDTLIS 180

Query: 454 TGESETFMQKAIQEQGRGRLVDTISEIQERHIAVKEIERSLQELHQVFLDISVLVQAQGE 275
           TG+SETF+QKAIQEQGRG+++DT+ EIQERH AVKE+ER+L+ELHQVFLD++VLV++QG 
Sbjct: 181 TGQSETFLQKAIQEQGRGQVMDTVMEIQERHEAVKELERNLKELHQVFLDMAVLVESQGA 240

Query: 274 QLDDIESQVGRAHSFVQGGTKQLQIAKKHQRNSRKWTCYA 155
           QLDDIESQV RA+SFV+GG +QLQ+A+KHQ+N+RKWTC+A
Sbjct: 241 QLDDIESQVNRANSFVRGGAQQLQVARKHQKNTRKWTCFA 280


>ref|XP_002524068.1| syntaxin, putative [Ricinus communis] gi|223536636|gb|EEF38278.1|
           syntaxin, putative [Ricinus communis]
          Length = 316

 Score =  369 bits (946), Expect = 1e-99
 Identities = 184/283 (65%), Positives = 234/283 (82%), Gaps = 9/283 (3%)
 Frame = -1

Query: 976 MNDLLPRSFSPSREDANSVEMRSI---------GISLDKFFEDIEGIKGELKEVEKLHQK 824
           MNDL   SFS  R +  S +   I         G++LDKFFED+E +K ELKE+E+L++ 
Sbjct: 1   MNDLFSGSFSRFRNEQGSPDHHVIQMTETPSTGGVNLDKFFEDVESVKDELKELERLNES 60

Query: 823 LQASHEESKTLHNAKSIKNLRSRMDADVXXXXXXXXXXXXXLESIDRANAANRNLPGCGP 644
           LQ++HE+SKTLHNAK++K+LRSRMDADV             LE++DR+NAANR+LPGCGP
Sbjct: 61  LQSAHEQSKTLHNAKTVKDLRSRMDADVAQALKKAKLIKVRLEALDRSNAANRSLPGCGP 120

Query: 643 GSSSDRTRTSIVNGLKKKLIESMENFNKLRQQIALEYKETVERRYYTVTGEKPDDQTVED 464
           GSSSDRTRTS+VNGL+KKL +SME+F+ LR++I+ EY+ETV+RRYYTVTGE PD++T++ 
Sbjct: 121 GSSSDRTRTSVVNGLRKKLKDSMESFSSLREKISTEYRETVQRRYYTVTGENPDEKTLDR 180

Query: 463 LISTGESETFMQKAIQEQGRGRLVDTISEIQERHIAVKEIERSLQELHQVFLDISVLVQA 284
           LISTGESETF+QKAIQEQGRGR++DTI+EIQERH AVKE+E++L+ELHQVFLD++VLVQA
Sbjct: 181 LISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKEMEKNLKELHQVFLDMAVLVQA 240

Query: 283 QGEQLDDIESQVGRAHSFVQGGTKQLQIAKKHQRNSRKWTCYA 155
           QGEQLDDIES + RA SFV+GGT+QLQ A+  Q+N+RKWTCYA
Sbjct: 241 QGEQLDDIESNMQRASSFVRGGTQQLQTARTLQKNTRKWTCYA 283


>ref|XP_002263986.1| PREDICTED: syntaxin-121-like [Vitis vinifera]
          Length = 324

 Score =  367 bits (942), Expect = 3e-99
 Identities = 189/277 (68%), Positives = 228/277 (82%), Gaps = 4/277 (1%)
 Frame = -1

Query: 976 MNDLLPRSFSP--SREDANSVEMRS--IGISLDKFFEDIEGIKGELKEVEKLHQKLQASH 809
           MNDL   SFS   S E   SVEM S   G++LDKFFED+E IK EL+E+E L QKL  +H
Sbjct: 1   MNDLFSGSFSRFRSEEPPPSVEMTSSTAGVNLDKFFEDVESIKEELREMESLQQKLHDAH 60

Query: 808 EESKTLHNAKSIKNLRSRMDADVXXXXXXXXXXXXXLESIDRANAANRNLPGCGPGSSSD 629
           E+SKTLHNA S+K LRSRMD+ V             LE++DR+NAANR+LPGCGPGSSSD
Sbjct: 61  EQSKTLHNANSVKELRSRMDSHVSLALKKAKLIKLRLEALDRSNAANRSLPGCGPGSSSD 120

Query: 628 RTRTSIVNGLKKKLIESMENFNKLRQQIALEYKETVERRYYTVTGEKPDDQTVEDLISTG 449
           RTRTS+VNGL+KKL +SM+ F  +R QI+ EY+ETV+RRY+TVTGE PD++TV+ LISTG
Sbjct: 121 RTRTSVVNGLRKKLRDSMDAFTSIRNQISSEYRETVQRRYFTVTGENPDEKTVDLLISTG 180

Query: 448 ESETFMQKAIQEQGRGRLVDTISEIQERHIAVKEIERSLQELHQVFLDISVLVQAQGEQL 269
           ESETF+QKAIQEQGRGR++DTISEI+ERH +VKE+ER+L+ELHQVFLD++VLVQAQGEQL
Sbjct: 181 ESETFLQKAIQEQGRGRVLDTISEIRERHESVKELERNLKELHQVFLDMAVLVQAQGEQL 240

Query: 268 DDIESQVGRAHSFVQGGTKQLQIAKKHQRNSRKWTCY 158
           DDIESQV RA+SFV GGT+QLQ A+KHQ +SRKWTCY
Sbjct: 241 DDIESQVARANSFVTGGTQQLQTARKHQISSRKWTCY 277


>ref|XP_003519112.1| PREDICTED: syntaxin-121-like [Glycine max]
          Length = 335

 Score =  367 bits (941), Expect = 4e-99
 Identities = 185/287 (64%), Positives = 233/287 (81%), Gaps = 14/287 (4%)
 Frame = -1

Query: 976 MNDLLPRSFSPSREDANS------VEM--------RSIGISLDKFFEDIEGIKGELKEVE 839
           MNDL   SFS  R D +S      +EM        R   ++LDKFFED+EG+K ELKE+E
Sbjct: 1   MNDLFSGSFSRFRSDQSSPDRHHDIEMGATASSGGRGGEVNLDKFFEDVEGVKEELKELE 60

Query: 838 KLHQKLQASHEESKTLHNAKSIKNLRSRMDADVXXXXXXXXXXXXXLESIDRANAANRNL 659
            L Q L++SHE+SKTLHNAK++++LR+RMD DV             LE+++R+NAANRN+
Sbjct: 61  GLAQSLRSSHEQSKTLHNAKAVRDLRARMDGDVSAALKKAKLIKLKLEALERSNAANRNM 120

Query: 658 PGCGPGSSSDRTRTSIVNGLKKKLIESMENFNKLRQQIALEYKETVERRYYTVTGEKPDD 479
           PGCGPGSSSDRTRTS+VNGLKKKL ++ME+FN++RQ ++ EY+ETV+RRY+TVTGE PDD
Sbjct: 121 PGCGPGSSSDRTRTSVVNGLKKKLKDAMESFNEIRQLVSSEYRETVQRRYFTVTGENPDD 180

Query: 478 QTVEDLISTGESETFMQKAIQEQGRGRLVDTISEIQERHIAVKEIERSLQELHQVFLDIS 299
           +T++ LISTGESETF+QKAIQEQGRGR++DTI+EIQERH AVKEIE++L+ELHQVFLD++
Sbjct: 181 KTLDLLISTGESETFLQKAIQEQGRGRILDTITEIQERHDAVKEIEKNLKELHQVFLDMT 240

Query: 298 VLVQAQGEQLDDIESQVGRAHSFVQGGTKQLQIAKKHQRNSRKWTCY 158
           VLVQ QGEQLDDIES V RAHSFV+ G +QLQ A+KHQ+N+RKWTCY
Sbjct: 241 VLVQHQGEQLDDIESHVARAHSFVRTGAEQLQTARKHQKNTRKWTCY 287


>ref|XP_004136519.1| PREDICTED: syntaxin-121-like [Cucumis sativus]
          Length = 307

 Score =  360 bits (925), Expect = 3e-97
 Identities = 184/281 (65%), Positives = 230/281 (81%), Gaps = 7/281 (2%)
 Frame = -1

Query: 976 MNDLLP-RSFSPSREDANSVEMRS------IGISLDKFFEDIEGIKGELKEVEKLHQKLQ 818
           MNDL   RSFS    DA+ VEM +        ++LDKFFED+E +K ELKE+E+L+  L 
Sbjct: 1   MNDLFSSRSFS---RDAHVVEMGNNASSSPTAVNLDKFFEDVESVKDELKELERLYSNLH 57

Query: 817 ASHEESKTLHNAKSIKNLRSRMDADVXXXXXXXXXXXXXLESIDRANAANRNLPGCGPGS 638
            SHE+SKTLHNAK++K+LRSRMD DV             LE++DR+NAANR+LPGCGPGS
Sbjct: 58  DSHEQSKTLHNAKAVKDLRSRMDTDVSLALKKAKLIKVRLEALDRSNAANRSLPGCGPGS 117

Query: 637 SSDRTRTSIVNGLKKKLIESMENFNKLRQQIALEYKETVERRYYTVTGEKPDDQTVEDLI 458
           SSDRTRTS+VNGL+KKL +SME+FN LRQQI+ EY+ETV+RRYYTVTGE PD++T++ LI
Sbjct: 118 SSDRTRTSVVNGLRKKLQDSMESFNNLRQQISSEYRETVQRRYYTVTGENPDEKTIDVLI 177

Query: 457 STGESETFMQKAIQEQGRGRLVDTISEIQERHIAVKEIERSLQELHQVFLDISVLVQAQG 278
           STGESETF+QKAIQEQGRGR++DTISEIQERH AVK++ER+L+ELHQVF+D++VLV  QG
Sbjct: 178 STGESETFLQKAIQEQGRGRILDTISEIQERHDAVKDLERNLKELHQVFMDMAVLVHEQG 237

Query: 277 EQLDDIESQVGRAHSFVQGGTKQLQIAKKHQRNSRKWTCYA 155
           E+LDDIESQV RAHSFV+GGT++L  A+ +Q+N+RKWT  A
Sbjct: 238 EKLDDIESQVNRAHSFVRGGTQELTTARVYQKNTRKWTIIA 278


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