BLASTX nr result
ID: Coptis25_contig00003215
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003215
(852 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|2... 140 6e-34
ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca... 148 2e-33
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul... 144 2e-32
ref|XP_002332539.1| BED finger-nbs-lrr resistance protein [Popul... 144 3e-32
ref|XP_002334714.1| predicted protein [Populus trichocarpa] gi|2... 135 4e-32
>ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|222834655|gb|EEE73118.1|
predicted protein [Populus trichocarpa]
Length = 681
Score = 140 bits (353), Expect(2) = 6e-34
Identities = 84/180 (46%), Positives = 115/180 (63%), Gaps = 3/180 (1%)
Frame = -2
Query: 851 MALYITKTKPKFMVRTGLSSTEIPHEDDWSEDLERVSFMESRIEDI--SIIPKCPKLLTL 678
MA+ I + + MV+ G E+P D+W+E+ RVS M + I+DI S P+CP L TL
Sbjct: 185 MAIQILQENSQGMVKAGAQLRELPDADEWTENFTRVSLMHNHIQDIPSSHSPRCPSLSTL 244
Query: 677 ILSQNYYEGRPLKHVASGFFMHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCEKL 498
+L +N LK +A FF ++ L VLDLS+T+I LPDSVS+LVNL LLLI C L
Sbjct: 245 LLCEN----SELKFIADSFFEQLRGLKVLDLSYTNITKLPDSVSELVNLTALLLIGCHML 300
Query: 497 VRVPSLSKLQSLRVLKLTYS-AIEELPHGMEMLVNLRSLDLSGNYKLKEMIPSGLISKFS 321
VPSL KL++LR L L+ + A+E++P GME L NLR L ++G ++ PSGL+ K S
Sbjct: 301 RHVPSLEKLRALRRLDLSGTWALEKMPQGMECLCNLRYLRMNGCG--EKEFPSGLLPKLS 358
Score = 30.4 bits (67), Expect(2) = 6e-34
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -1
Query: 273 ARERGGDFV------QELSSLTQLENLDIAFHQLSDFIAYGDKFGNFERLKKYCI 127
A++RGG + +E++ L +LE+L F SDF+ Y + L KY I
Sbjct: 368 AKDRGGQYAPITVKGKEVACLRKLESLGCHFEGYSDFVEYLKSQDETQSLSKYQI 422
>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 958
Score = 148 bits (373), Expect = 2e-33
Identities = 89/179 (49%), Positives = 113/179 (63%), Gaps = 2/179 (1%)
Frame = -2
Query: 851 MALYITKTKPKFMVRTGLSSTEIPHEDDWSEDLERVSFMESRIEDI--SIIPKCPKLLTL 678
MAL + MV E+P +D+W EDL RVS ME+R+++I S P CPKL TL
Sbjct: 433 MALQKLRENSPIMVEVRERLKELPGKDEWKEDLVRVSLMENRLKEIPSSCSPMCPKLSTL 492
Query: 677 ILSQNYYEGRPLKHVASGFFMHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCEKL 498
L+ N L+ +A FF H++ L VL+LS T I LP S SDLVNL L L CEKL
Sbjct: 493 FLNSNI----ELEMIADSFFKHLQGLKVLNLSSTAIPKLPGSFSDLVNLTALYLRRCEKL 548
Query: 497 VRVPSLSKLQSLRVLKLTYSAIEELPHGMEMLVNLRSLDLSGNYKLKEMIPSGLISKFS 321
+PSL+KL+ LR L L Y+A+EELP GMEML NLR L+L GN LKE +P+G++ S
Sbjct: 549 RHIPSLAKLRELRKLDLRYTALEELPQGMEMLSNLRYLNLHGN-NLKE-LPAGILPNLS 605
>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 1075
Score = 144 bits (364), Expect = 2e-32
Identities = 87/179 (48%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Frame = -2
Query: 851 MALYITKTKPKFMVRTGLSSTEIPHEDDWSEDLERVSFMESRIEDI--SIIPKCPKLLTL 678
MAL + K MV E+P ED+W D+ RVS M++ +++I P CPKL TL
Sbjct: 552 MALQKLREKSPIMVEVEEQLKELPDEDEWKVDVMRVSLMKNHLKEIPSGCSPMCPKLSTL 611
Query: 677 ILSQNYYEGRPLKHVASGFFMHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCEKL 498
L N+ L+ +A FF H++ L VLDLS T I LP S SDLVNL L L C L
Sbjct: 612 FLFSNF----KLEMIADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCHNL 667
Query: 497 VRVPSLSKLQSLRVLKLTYSAIEELPHGMEMLVNLRSLDLSGNYKLKEMIPSGLISKFS 321
+PSL+KL+ LR L L Y+A+EELP GMEML NLR L+L GN LKEM P+G++ K S
Sbjct: 668 RYIPSLAKLRGLRKLDLRYTALEELPQGMEMLSNLRYLNLFGN-SLKEM-PAGILPKLS 724
>ref|XP_002332539.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222832683|gb|EEE71160.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 875
Score = 144 bits (362), Expect = 3e-32
Identities = 84/179 (46%), Positives = 116/179 (64%), Gaps = 2/179 (1%)
Frame = -2
Query: 851 MALYITKTKPKFMVRTGLSSTEIPHEDDWSEDLERVSFMESRIEDI--SIIPKCPKLLTL 678
MA+ I ++MV+ G E+P ++W+E+L RVS M++ IE+I S P CP L TL
Sbjct: 646 MAIQILLENSQYMVKAGAQLKELPDAEEWTENLTRVSLMQNEIEEIPSSHSPMCPNLSTL 705
Query: 677 ILSQNYYEGRPLKHVASGFFMHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCEKL 498
L N R L+ VA FF + L VLDLS T I++LPDSVSDLV+L LLL CEKL
Sbjct: 706 FLCYN----RGLRFVADSFFKQLHGLMVLDLSRTGIKNLPDSVSDLVSLIALLLKECEKL 761
Query: 497 VRVPSLSKLQSLRVLKLTYSAIEELPHGMEMLVNLRSLDLSGNYKLKEMIPSGLISKFS 321
VPSL KL++L+ L L+++ +E++P GME L NLR L ++G ++ PSG++ KFS
Sbjct: 762 RHVPSLKKLRALKRLDLSWTTLEKMPQGMECLTNLRYLRMTGCG--EKEFPSGILPKFS 818
>ref|XP_002334714.1| predicted protein [Populus trichocarpa] gi|222874252|gb|EEF11383.1|
predicted protein [Populus trichocarpa]
Length = 596
Score = 135 bits (339), Expect(2) = 4e-32
Identities = 79/179 (44%), Positives = 114/179 (63%), Gaps = 2/179 (1%)
Frame = -2
Query: 851 MALYITKTKPKFMVRTGLSSTEIPHEDDWSEDLERVSFMESRIEDI--SIIPKCPKLLTL 678
MA+ I + MV+ G E+P ++W+E+L RVS + ++I++I S P CP L TL
Sbjct: 100 MAIQILLDNSQGMVKAGAQLKELPDAEEWTENLTRVSLIRNKIKEIPSSHSPMCPYLSTL 159
Query: 677 ILSQNYYEGRPLKHVASGFFMHMKSLTVLDLSWTHIESLPDSVSDLVNLRGLLLIYCEKL 498
+L QN+ L+ +A FF + L VLDLS T IE+LPDSVSDLV+L LLL CE L
Sbjct: 160 LLCQNHC----LRFIADSFFKQLHGLKVLDLSGTSIENLPDSVSDLVSLTALLLNECENL 215
Query: 497 VRVPSLSKLQSLRVLKLTYSAIEELPHGMEMLVNLRSLDLSGNYKLKEMIPSGLISKFS 321
VPSL KL++L+ L L ++ ++++P GME L NLR L ++G ++ PSG++ K S
Sbjct: 216 RHVPSLEKLRALKRLDLYWTPLKKMPQGMECLTNLRYLRMNGCG--EKEFPSGILPKLS 272
Score = 29.6 bits (65), Expect(2) = 4e-32
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 246 QELSSLTQLENLDIAFHQLSDFIAYGDKFGNFERLKKYCI 127
+E+ SL LE+L+ F SDF+ Y + L KY I
Sbjct: 297 KEVRSLRNLESLECHFEGFSDFVEYLRSRDGIQSLSKYTI 336