BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003213
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   129   4e-45
ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   129   4e-45
dbj|BAD43116.1| unnamed protein product [Arabidopsis thaliana]        128   3e-44
ref|NP_849348.1| DEAD-box ATP-dependent RNA helicase 39 [Arabido...   128   3e-44
emb|CAB39640.1| putative protein [Arabidopsis thaliana] gi|72676...   128   3e-44

>ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
           sativus]
          Length = 634

 Score =  129 bits (324), Expect(2) = 4e-45
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = -1

Query: 731 QVLEPSLSKGNRVMVFCNTLNSSHVVDHYLGENQISTVNYHGEVPVEQRVENLKKFKSED 552
           QVLEPSL+KGNRVMVFCNTLNSS  VDH+LGENQISTVNYHGEVP ++RVENLKKFKS+D
Sbjct: 369 QVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDD 428

Query: 551 GDCPTLVC 528
            DCPTLVC
Sbjct: 429 ADCPTLVC 436



 Score = 79.7 bits (195), Expect(2) = 4e-45
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -2

Query: 526 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGS 413
           DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMG+
Sbjct: 438 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGA 475



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 34/56 (60%), Positives = 38/56 (67%)
 Frame = -3

Query: 471 FPQTLLTTSTAQGELLVWGAKGKVTSLIAKKDTSLATRIEEALRKNESLESLTVDN 304
           FP   +      G     GAKGKVTSL+ KKD  LATRIEEA+RKNESLESLT D+
Sbjct: 456 FPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDNILATRIEEAIRKNESLESLTADS 511


>ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
           sativus]
          Length = 634

 Score =  129 bits (324), Expect(2) = 4e-45
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = -1

Query: 731 QVLEPSLSKGNRVMVFCNTLNSSHVVDHYLGENQISTVNYHGEVPVEQRVENLKKFKSED 552
           QVLEPSL+KGNRVMVFCNTLNSS  VDH+LGENQISTVNYHGEVP ++RVENLKKFKS+D
Sbjct: 369 QVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLKKFKSDD 428

Query: 551 GDCPTLVC 528
            DCPTLVC
Sbjct: 429 ADCPTLVC 436



 Score = 79.7 bits (195), Expect(2) = 4e-45
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -2

Query: 526 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGS 413
           DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMG+
Sbjct: 438 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGA 475



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 34/56 (60%), Positives = 38/56 (67%)
 Frame = -3

Query: 471 FPQTLLTTSTAQGELLVWGAKGKVTSLIAKKDTSLATRIEEALRKNESLESLTVDN 304
           FP   +      G     GAKGKVTSL+ KKD  LATRIEEA+RKNESLESLT D+
Sbjct: 456 FPSNSIDYLHRTGRTARMGAKGKVTSLVGKKDNILATRIEEAIRKNESLESLTADS 511


>dbj|BAD43116.1| unnamed protein product [Arabidopsis thaliana]
          Length = 621

 Score =  128 bits (322), Expect(2) = 3e-44
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = -1

Query: 731 QVLEPSLSKGNRVMVFCNTLNSSHVVDHYLGENQISTVNYHGEVPVEQRVENLKKFKSED 552
           QVLEPSL+KG++VMVFCNTLNSS  VDHYL ENQISTVNYHGEVP EQRVENLKKFK E+
Sbjct: 361 QVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEE 420

Query: 551 GDCPTLVC 528
           GDCPTLVC
Sbjct: 421 GDCPTLVC 428



 Score = 77.8 bits (190), Expect(2) = 3e-44
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = -2

Query: 526 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGS 413
           DLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMG+
Sbjct: 430 DLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGA 467



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/56 (57%), Positives = 38/56 (67%)
 Frame = -3

Query: 471 FPQTLLTTSTAQGELLVWGAKGKVTSLIAKKDTSLATRIEEALRKNESLESLTVDN 304
           FP+  +      G     GAKGKVTSL+++KD  LA RIEEA+R NESLESLT DN
Sbjct: 448 FPKNSIDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRNNESLESLTTDN 503


>ref|NP_849348.1| DEAD-box ATP-dependent RNA helicase 39 [Arabidopsis thaliana]
           gi|108861892|sp|Q56X76.2|RH39_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 39
           gi|34365771|gb|AAQ65197.1| At4g09730 [Arabidopsis
           thaliana] gi|51968836|dbj|BAD43110.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|51969012|dbj|BAD43198.1| unnamed protein product
           [Arabidopsis thaliana] gi|51969674|dbj|BAD43529.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332657387|gb|AEE82787.1| DEAD-box ATP-dependent RNA
           helicase 39 [Arabidopsis thaliana]
          Length = 621

 Score =  128 bits (322), Expect(2) = 3e-44
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = -1

Query: 731 QVLEPSLSKGNRVMVFCNTLNSSHVVDHYLGENQISTVNYHGEVPVEQRVENLKKFKSED 552
           QVLEPSL+KG++VMVFCNTLNSS  VDHYL ENQISTVNYHGEVP EQRVENLKKFK E+
Sbjct: 361 QVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEE 420

Query: 551 GDCPTLVC 528
           GDCPTLVC
Sbjct: 421 GDCPTLVC 428



 Score = 77.8 bits (190), Expect(2) = 3e-44
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = -2

Query: 526 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGS 413
           DLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMG+
Sbjct: 430 DLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGA 467



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/56 (57%), Positives = 38/56 (67%)
 Frame = -3

Query: 471 FPQTLLTTSTAQGELLVWGAKGKVTSLIAKKDTSLATRIEEALRKNESLESLTVDN 304
           FP+  +      G     GAKGKVTSL+++KD  LA RIEEA+R NESLESLT DN
Sbjct: 448 FPKNSIDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRNNESLESLTTDN 503


>emb|CAB39640.1| putative protein [Arabidopsis thaliana] gi|7267668|emb|CAB78096.1|
           putative protein [Arabidopsis thaliana]
          Length = 496

 Score =  128 bits (322), Expect(2) = 3e-44
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = -1

Query: 731 QVLEPSLSKGNRVMVFCNTLNSSHVVDHYLGENQISTVNYHGEVPVEQRVENLKKFKSED 552
           QVLEPSL+KG++VMVFCNTLNSS  VDHYL ENQISTVNYHGEVP EQRVENLKKFK E+
Sbjct: 354 QVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEE 413

Query: 551 GDCPTLVC 528
           GDCPTLVC
Sbjct: 414 GDCPTLVC 421



 Score = 77.8 bits (190), Expect(2) = 3e-44
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = -2

Query: 526 DLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGS 413
           DLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMG+
Sbjct: 423 DLAARGLDLDVDHVVMFDFPKNSIDYLHRTGRTARMGA 460