BLASTX nr result

ID: Coptis25_contig00003206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003206
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620785.1| hypothetical protein MTR_6g090420 [Medicago ...   122   1e-28
ref|XP_003620776.1| hypothetical protein MTR_6g090300 [Medicago ...   122   1e-28
ref|XP_003613311.1| hypothetical protein MTR_5g035160 [Medicago ...   107   2e-27
ref|XP_003610090.1| hypothetical protein MTR_4g127830 [Medicago ...   109   1e-25
ref|XP_003597432.1| hypothetical protein MTR_2g097990 [Medicago ...   115   5e-24

>ref|XP_003620785.1| hypothetical protein MTR_6g090420 [Medicago truncatula]
           gi|355495800|gb|AES77003.1| hypothetical protein
           MTR_6g090420 [Medicago truncatula]
          Length = 361

 Score =  122 bits (306), Expect(2) = 1e-28
 Identities = 61/130 (46%), Positives = 83/130 (63%)
 Frame = -2

Query: 458 RSCGPVPLDEILDVASSALSLCLPDFDLNSLVVNATVPSKPQHVLAEAFYGRIVAGLQRE 279
           R  G   +D   D A   L   +PDFD+NS     TVP K QHVLA A + +IV  ++ +
Sbjct: 38  RDSGICGMDSDFDNALDGLHGAIPDFDVNSFTCKDTVPPKAQHVLASALFSKIVQDMEVK 97

Query: 278 FDLSSRQKAVMGCLQSKHVKNFQLVIQMEGLVQRMSPVEYRSILRYRLMIPLYPDGGLCP 99
           FD+++RQK V GCL++ H ++F L I ++GL Q MSPVEYR+ILRY LMIPL+    +CP
Sbjct: 98  FDMTARQKEVFGCLEAAHAQDFILGIPIDGLCQHMSPVEYRTILRYCLMIPLFHIDEVCP 157

Query: 98  VCKKE*IGCF 69
            C+K  +  F
Sbjct: 158 TCRKTCLDTF 167



 Score = 28.9 bits (63), Expect(2) = 1e-28
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 91  KKNRLDAFGDHAAHCRHFSDFK 26
           +K  LD FG+H  HC+    FK
Sbjct: 160 RKTCLDTFGEHVVHCKELLGFK 181


>ref|XP_003620776.1| hypothetical protein MTR_6g090300 [Medicago truncatula]
           gi|355495791|gb|AES76994.1| hypothetical protein
           MTR_6g090300 [Medicago truncatula]
          Length = 347

 Score =  122 bits (306), Expect(2) = 1e-28
 Identities = 61/130 (46%), Positives = 83/130 (63%)
 Frame = -2

Query: 458 RSCGPVPLDEILDVASSALSLCLPDFDLNSLVVNATVPSKPQHVLAEAFYGRIVAGLQRE 279
           R  G   +D   D A   L   +PDFD+NS     TVP K QHVLA A + +IV  ++ +
Sbjct: 38  RDSGICGMDSDFDNALDGLHGAIPDFDVNSFTCKDTVPPKAQHVLASALFSKIVQDMEVK 97

Query: 278 FDLSSRQKAVMGCLQSKHVKNFQLVIQMEGLVQRMSPVEYRSILRYRLMIPLYPDGGLCP 99
           FD+++RQK V GCL++ H ++F L I ++GL Q MSPVEYR+ILRY LMIPL+    +CP
Sbjct: 98  FDMTARQKEVFGCLEAAHAQDFILGIPIDGLCQHMSPVEYRTILRYCLMIPLFHIDEVCP 157

Query: 98  VCKKE*IGCF 69
            C+K  +  F
Sbjct: 158 TCRKTCLDTF 167



 Score = 28.9 bits (63), Expect(2) = 1e-28
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 91  KKNRLDAFGDHAAHCRHFSDFK 26
           +K  LD FG+H  HC+    FK
Sbjct: 160 RKTCLDTFGEHVVHCKELLGFK 181


>ref|XP_003613311.1| hypothetical protein MTR_5g035160 [Medicago truncatula]
           gi|355514646|gb|AES96269.1| hypothetical protein
           MTR_5g035160 [Medicago truncatula]
          Length = 344

 Score =  107 bits (267), Expect(2) = 2e-27
 Identities = 53/123 (43%), Positives = 78/123 (63%)
 Frame = -2

Query: 437 LDEILDVASSALSLCLPDFDLNSLVVNATVPSKPQHVLAEAFYGRIVAGLQREFDLSSRQ 258
           +D   D     L   + DFD++S     TVP K +HVL  A + + V  ++ +FD+++RQ
Sbjct: 23  MDSDFDNVLDGLRGTILDFDVSSFTSKDTVPPKAEHVLTSALFSKSVQDMEVKFDMTTRQ 82

Query: 257 KAVMGCLQSKHVKNFQLVIQMEGLVQRMSPVEYRSILRYRLMIPLYPDGGLCPVCKKE*I 78
           KA++GCLQ+ H ++F L I ++GL Q MSPVEYR+ILRYR MIPL+    +C V +K  +
Sbjct: 83  KAILGCLQAAHARDFLLAIPIDGLGQHMSPVEYRTILRYRRMIPLFSIDEVCHVYRKACL 142

Query: 77  GCF 69
             F
Sbjct: 143 DTF 145



 Score = 40.0 bits (92), Expect(2) = 2e-27
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -3

Query: 91  KKNRLDAFGDHAAHCRHFSDFK*RHDYVRD 2
           +K  LD FG+H  HC+    FK +HD+VRD
Sbjct: 138 RKACLDTFGEHVVHCKELPGFKYKHDFVRD 167


>ref|XP_003610090.1| hypothetical protein MTR_4g127830 [Medicago truncatula]
           gi|355511145|gb|AES92287.1| hypothetical protein
           MTR_4g127830 [Medicago truncatula]
          Length = 235

 Score =  109 bits (273), Expect(2) = 1e-25
 Identities = 54/122 (44%), Positives = 78/122 (63%)
 Frame = -2

Query: 434 DEILDVASSALSLCLPDFDLNSLVVNATVPSKPQHVLAEAFYGRIVAGLQREFDLSSRQK 255
           D ILD    A+S    DFD++S      VP K QHVLA A + + V  ++ +FD+++R+K
Sbjct: 6   DNILDCLRGAIS----DFDVSSFTSKDIVPPKAQHVLASALFSKSVQNMEVKFDITTRKK 61

Query: 254 AVMGCLQSKHVKNFQLVIQMEGLVQRMSPVEYRSILRYRLMIPLYPDGGLCPVCKKE*IG 75
            + GCLQ+ H ++F L I ++GLVQ +S VEYR+I RY L IPL+    +CPVC+K  + 
Sbjct: 62  TIFGCLQAAHAQDFLLAILIDGLVQHISSVEYRTIFRYHLTIPLFSIDEVCPVCRKACLN 121

Query: 74  CF 69
            F
Sbjct: 122 TF 123



 Score = 31.6 bits (70), Expect(2) = 1e-25
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 91  KKNRLDAFGDHAAHCRHFSDFK*RHDYV 8
           +K  L+ FG+H  HC+     K RHD+V
Sbjct: 116 RKACLNTFGEHVVHCKELPRSKYRHDFV 143


>ref|XP_003597432.1| hypothetical protein MTR_2g097990 [Medicago truncatula]
           gi|355486480|gb|AES67683.1| hypothetical protein
           MTR_2g097990 [Medicago truncatula]
          Length = 289

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/123 (45%), Positives = 79/123 (64%)
 Frame = -2

Query: 437 LDEILDVASSALSLCLPDFDLNSLVVNATVPSKPQHVLAEAFYGRIVAGLQREFDLSSRQ 258
           +D   D A   L   +P FD++      TVP K QH+LA A + + V  ++ +FD+++ Q
Sbjct: 1   MDSDFDNAFDGLHSTIPYFDVSIFTNKDTVPPKTQHILASALFSKSVQDMEVKFDMTTGQ 60

Query: 257 KAVMGCLQSKHVKNFQLVIQMEGLVQRMSPVEYRSILRYRLMIPLYPDGGLCPVCKKE*I 78
           KA+  CLQ+ H +NF L I ++GL Q MSPVEYR+ILRYRLMIPL+P   +C VC+K  +
Sbjct: 61  KAIFECLQAAHAQNFLLAIPIDGLGQHMSPVEYRTILRYRLMIPLFPIDEVCSVCRKSCL 120

Query: 77  GCF 69
             F
Sbjct: 121 DTF 123


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