BLASTX nr result

ID: Coptis25_contig00003194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003194
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283663.2| PREDICTED: uncharacterized protein LOC100258...   245   9e-63
ref|XP_002281809.1| PREDICTED: uncharacterized protein LOC100255...   231   1e-58
ref|XP_002525421.1| conserved hypothetical protein [Ricinus comm...   230   4e-58
gb|ABK95741.1| unknown [Populus trichocarpa]                          222   1e-55
ref|XP_002325840.1| predicted protein [Populus trichocarpa] gi|2...   221   2e-55

>ref|XP_002283663.2| PREDICTED: uncharacterized protein LOC100258776 [Vitis vinifera]
           gi|147858690|emb|CAN78878.1| hypothetical protein
           VITISV_024989 [Vitis vinifera]
           gi|297746483|emb|CBI16539.3| unnamed protein product
           [Vitis vinifera]
          Length = 212

 Score =  245 bits (626), Expect = 9e-63
 Identities = 125/195 (64%), Positives = 154/195 (78%), Gaps = 3/195 (1%)
 Frame = -1

Query: 577 AEPDFLLQWGNRKRLRCVKIKEENDASDGNGGSSVTRKKTTSRIDRRVVRTDKETPRPPS 398
           +EPDFLL+WGNRKRLRCVK+K+  + ++ +    +  KK TSR+DRRVV  +KETP P  
Sbjct: 14  SEPDFLLRWGNRKRLRCVKVKDGRNVAEKS--DCLGSKKITSRVDRRVVTAEKETPSP-- 69

Query: 397 PFRSINKNSVETTPIKST---KSVSCSPEKEDRYYTTRGSLLGFEDNGKMFMENGGGEDK 227
             ++   N +  +P+K+    K  + SPEKEDRYYTTRGS+   +DNGK+ M++GG ED+
Sbjct: 70  --QTHRLNRISDSPMKNRENRKISATSPEKEDRYYTTRGSMGMMDDNGKVLMDHGG-EDR 126

Query: 226 GLVWPRLFISLSSKEKEEDFMAMKGCKPSQRPKKRAKLIQRSLLLVTPGTWLSDLCQERY 47
           G VWP+LFISLSSKEKEEDFMAMKGCK  QRPKKRAKLIQ++LLLV+PG WLSDLCQERY
Sbjct: 127 GTVWPKLFISLSSKEKEEDFMAMKGCKLPQRPKKRAKLIQKTLLLVSPGAWLSDLCQERY 186

Query: 46  EVREKKTTKKRPRGL 2
           EVREKK +KKRPRGL
Sbjct: 187 EVREKKASKKRPRGL 201


>ref|XP_002281809.1| PREDICTED: uncharacterized protein LOC100255634 [Vitis vinifera]
           gi|297739765|emb|CBI29947.3| unnamed protein product
           [Vitis vinifera]
          Length = 214

 Score =  231 bits (590), Expect = 1e-58
 Identities = 125/194 (64%), Positives = 146/194 (75%), Gaps = 3/194 (1%)
 Frame = -1

Query: 574 EPDFLLQWGNRKRLRCVKIKEENDASDGNGGSSVTRKKTTSRIDRRVVR-TDKETPR-PP 401
           E DF LQWGNRKRLRCV++K+ N +   NG     R+K TSRIDR VV  ++KE+    P
Sbjct: 15  ETDFFLQWGNRKRLRCVRVKDPNVSVRSNGA---IRRKITSRIDRSVVTGSEKESAHLQP 71

Query: 400 SPFRSINKNSVETTPIKSTKSVSCSPEKEDRYYTTRGSLLGFEDNGKMFMENGGG-EDKG 224
           S F   N        + +    S S EKEDRYYTTRGS  G +DNGK+ +E GGG +D+G
Sbjct: 72  SRFTR-NTEGATLRSVTNENRKSGSSEKEDRYYTTRGSA-GMDDNGKVSVEGGGGGDDRG 129

Query: 223 LVWPRLFISLSSKEKEEDFMAMKGCKPSQRPKKRAKLIQRSLLLVTPGTWLSDLCQERYE 44
           LVWP+L+ISLSSKEKEEDFMAMKGCK  QRPKKRAK+IQRSLLLV+PG WLSD+CQERYE
Sbjct: 130 LVWPKLYISLSSKEKEEDFMAMKGCKLPQRPKKRAKIIQRSLLLVSPGAWLSDMCQERYE 189

Query: 43  VREKKTTKKRPRGL 2
           VREKKT+KKRPRGL
Sbjct: 190 VREKKTSKKRPRGL 203


>ref|XP_002525421.1| conserved hypothetical protein [Ricinus communis]
           gi|223535234|gb|EEF36911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 222

 Score =  230 bits (586), Expect = 4e-58
 Identities = 123/200 (61%), Positives = 154/200 (77%), Gaps = 9/200 (4%)
 Frame = -1

Query: 574 EPDFLLQWGNRKRLRCVKIKEENDASDGNGGSSVTRKKTTSRIDRRVVR--TDKETPRPP 401
           EPDF LQWGN+KRLRCV++++    S  + G  V R+K T+RIDRRV+   TDKET  P 
Sbjct: 15  EPDFFLQWGNKKRLRCVRVRDPQIISQRSDG--VFRRKITTRIDRRVISSTTDKETSHPQ 72

Query: 400 SPFRSINKNSVETTPIKST---KSVSCSPEKEDRYYTTRGSLLGF--EDNGKMFME-NGG 239
           S  R + +NS     ++S+      S SPEKEDRYYTTRGS++G   ++NGK+  + N G
Sbjct: 73  SNHR-LTRNSEAAAILRSSVTENKKSASPEKEDRYYTTRGSVVGVGVDENGKVSWDANNG 131

Query: 238 GEDKG-LVWPRLFISLSSKEKEEDFMAMKGCKPSQRPKKRAKLIQRSLLLVTPGTWLSDL 62
            ++KG +VWP+L+ISLSSKEKEEDFMAMKGCK  QRPKKRAK+IQRSLLLV+PG WL+D+
Sbjct: 132 DDNKGHVVWPKLYISLSSKEKEEDFMAMKGCKLPQRPKKRAKIIQRSLLLVSPGAWLTDM 191

Query: 61  CQERYEVREKKTTKKRPRGL 2
           CQERYEVREKK++KKRPRGL
Sbjct: 192 CQERYEVREKKSSKKRPRGL 211


>gb|ABK95741.1| unknown [Populus trichocarpa]
          Length = 225

 Score =  222 bits (565), Expect = 1e-55
 Identities = 119/196 (60%), Positives = 145/196 (73%), Gaps = 5/196 (2%)
 Frame = -1

Query: 574 EPDFLLQWGNRKRLRCVKIKEENDASDGNGGSSVTRKKTTSRIDRRVVR---TDKETPRP 404
           EP+F LQWGN+KRLRCV++++    S  + G  V R+KTTSRIDR VV    T+K+T  P
Sbjct: 22  EPEFFLQWGNKKRLRCVRVRDPQIISQRSDG--VFRRKTTSRIDRFVVSSATTEKDTYLP 79

Query: 403 PSPFRSINKNSVETTPIKSTKSVSCSPEKEDRYYTTRGSLLGFEDNGKMFMENGGGEDKG 224
            S   + N  +       +    S SPEKEDR YTTRGS +  ++NGK+ M+   G+DKG
Sbjct: 80  QSNRLTRNSEAAILRSSVTENRKSSSPEKEDRCYTTRGSGI-LDENGKVSMDGNNGDDKG 138

Query: 223 LVWPRLFISLSSKEKEEDFMAMKGCKPSQRPKKRAKLIQRSLLLVTPGTWLSDLCQERYE 44
            VWP+LFI+LSSKEKEEDFMAMKGCK  QRPKKRAK+IQRSLLLV+PG WL+D+CQERYE
Sbjct: 139 HVWPKLFITLSSKEKEEDFMAMKGCKLPQRPKKRAKIIQRSLLLVSPGAWLTDMCQERYE 198

Query: 43  VREKK--TTKKRPRGL 2
           VREKK  T+KKRPRGL
Sbjct: 199 VREKKSSTSKKRPRGL 214


>ref|XP_002325840.1| predicted protein [Populus trichocarpa] gi|222862715|gb|EEF00222.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  221 bits (562), Expect = 2e-55
 Identities = 115/194 (59%), Positives = 143/194 (73%), Gaps = 3/194 (1%)
 Frame = -1

Query: 574 EPDFLLQWGNRKRLRCVKIKEENDASDGNGGSSVTRKKTTSRIDRRVVR---TDKETPRP 404
           EP+F LQWGN+KRLRCV++++    S  + G  V R+K TSRIDR VV    T+K+T   
Sbjct: 16  EPEFFLQWGNKKRLRCVRVRDPQIISRRSDG--VFRRKITSRIDRFVVSSATTEKDTSLL 73

Query: 403 PSPFRSINKNSVETTPIKSTKSVSCSPEKEDRYYTTRGSLLGFEDNGKMFMENGGGEDKG 224
            S   + N  +       +    S SPEKEDRYYTTRGS+ G ++NGK+ M+   G+DK 
Sbjct: 74  QSNRITRNSEAAVLRSSVAENRKSSSPEKEDRYYTTRGSV-GLDENGKVSMDGNNGDDKA 132

Query: 223 LVWPRLFISLSSKEKEEDFMAMKGCKPSQRPKKRAKLIQRSLLLVTPGTWLSDLCQERYE 44
            VWP+L+ +LSSKEKEEDFMAMKGCK  QRPKKRAK+IQRSLLLV+PG WL+D+CQERYE
Sbjct: 133 HVWPKLYTTLSSKEKEEDFMAMKGCKLPQRPKKRAKIIQRSLLLVSPGAWLTDMCQERYE 192

Query: 43  VREKKTTKKRPRGL 2
           VREKK++KKRPRGL
Sbjct: 193 VREKKSSKKRPRGL 206


Top