BLASTX nr result

ID: Coptis25_contig00003186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003186
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530179.1| Disease resistance protein RPM1, putative [R...   199   5e-49
gb|AFC90624.1| nucleotide-binding site leucine-rich repeat prote...   195   6e-48
gb|AFC90573.1| nucleotide-binding site leucine-rich repeat prote...   195   6e-48
gb|AFC90780.1| nucleotide-binding site leucine-rich repeat prote...   195   8e-48
gb|AFC90686.1| nucleotide-binding site leucine-rich repeat prote...   194   1e-47

>ref|XP_002530179.1| Disease resistance protein RPM1, putative [Ricinus communis]
           gi|223530298|gb|EEF32193.1| Disease resistance protein
           RPM1, putative [Ricinus communis]
          Length = 969

 Score =  199 bits (505), Expect = 5e-49
 Identities = 105/221 (47%), Positives = 140/221 (63%), Gaps = 1/221 (0%)
 Frame = +2

Query: 14  DLSAEQDEXXXXXXXXXXXXXKGKFVLILDDIWEAFDLQDLGVPKPTKDNGCKIILTTRS 193
           D+S E DE             K KFVLILDD+WE F L+++G+P  +K+NGCK+I T+RS
Sbjct: 213 DISIEDDEKKRAALLWNALSNKQKFVLILDDLWENFSLENVGIPI-SKENGCKLIFTSRS 271

Query: 194 REVCEGMLCQKYVKVEQLSEDEAWELFSVNVDEKLVPDVEEIAKEVVAECCGLPLAIITI 373
            EVC  M C++ +KVE LSE+EAW LF   + EK++ D  EIAK +   C GLPL IIT+
Sbjct: 272 LEVCNKMDCRRKIKVEPLSEEEAWNLFQEKLGEKILDDGSEIAKSIAKRCAGLPLGIITM 331

Query: 374 GRSMRS-KDVGEWRVALSDLKKSTSLNMDMREQVIQRLKFSYDRLREENHQKCFLYCALY 550
             SM+   D+ EWR  L  L+ S     D   +V + LKFSYDRL     QKC+LYCALY
Sbjct: 332 ASSMKGVDDLSEWRNTLRILEDSKVGEGDNEFEVFRILKFSYDRLGNSALQKCYLYCALY 391

Query: 551 PEDYKIDTSELIEYWVMEGLVKGSSKEDEMLRGRVILNILK 673
           PED KI   ELI+Y + EG+++  S++ E  +G  +LN L+
Sbjct: 392 PEDRKIRRVELIDYLIAEGVIEEKSRQAEFDKGHTMLNKLE 432


>gb|AFC90624.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  195 bits (496), Expect = 6e-48
 Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 5/224 (2%)
 Frame = +2

Query: 5   VTLDLSAEQDEXXXXXXXXXXXXXKGKFVLILDDIWEAFDLQDLGVPKPTKDNGCKIILT 184
           +   L  ++DE             + K+VLI+DD+WEAF L+ +G+P+P + NGCK++LT
Sbjct: 44  LNFSLLDDEDEKRRATHLYAALPRRKKYVLIIDDLWEAFPLERVGIPEPIRSNGCKLVLT 103

Query: 185 TRSREVCEGMLCQKYVKVEQLSEDEAWELF---SVNVDEKLVPDVEEIAKEVVAECCGLP 355
           TRS EVC GM CQ  VKV+ L+E+EA  LF   +V  D  L P+VEEIA ++  +C  LP
Sbjct: 104 TRSLEVCRGMECQP-VKVDLLTEEEALTLFPTKAVGHDTVLAPEVEEIAAKIAKKCACLP 162

Query: 356 LAIITI-GRSMRSKDVGEWRVALSDLKKSTSLNMDMREQVIQRLKFSYDRLREENHQKCF 532
           LA++T+ G  M  K + EWR AL++L +ST    D   +VI+RLKFSY RL  +  Q CF
Sbjct: 163 LAVVTVAGSLMGLKGICEWRDALNELIRSTKDASDDLSKVIERLKFSYSRLGNKELQDCF 222

Query: 533 LYCALYPEDYKIDTSELIEYWVMEGLVKG-SSKEDEMLRGRVIL 661
           LYC+LYPED+KI  +ELIEYW+ E L+    S E +M +G  IL
Sbjct: 223 LYCSLYPEDHKILVNELIEYWIAEELITDIDSVEAQMNKGHAIL 266


>gb|AFC90573.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 266

 Score =  195 bits (496), Expect = 6e-48
 Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 5/224 (2%)
 Frame = +2

Query: 5   VTLDLSAEQDEXXXXXXXXXXXXXKGKFVLILDDIWEAFDLQDLGVPKPTKDNGCKIILT 184
           +   L  ++DE             + K+VLI+DD+WEAF L+ +G+P+P + NGCK++LT
Sbjct: 44  LNFSLLDDEDEKRRATHLYAALSQRKKYVLIIDDLWEAFPLERVGIPEPIRSNGCKLVLT 103

Query: 185 TRSREVCEGMLCQKYVKVEQLSEDEAWELF---SVNVDEKLVPDVEEIAKEVVAECCGLP 355
           TRS EVC GM CQ  VKV+ L+E+EA  LF   +V  D  L P+VEEIA ++  +C  LP
Sbjct: 104 TRSLEVCRGMECQP-VKVDLLTEEEALTLFLTKAVGHDTVLAPEVEEIAAKIAKKCACLP 162

Query: 356 LAIITI-GRSMRSKDVGEWRVALSDLKKSTSLNMDMREQVIQRLKFSYDRLREENHQKCF 532
           LA++T+ G  M  K + EWR AL++L +ST    D   +VI+RLKFSY RL  +  Q CF
Sbjct: 163 LAVVTVAGSLMGLKGICEWRDALNELIRSTKDASDDLSKVIERLKFSYSRLGNKELQDCF 222

Query: 533 LYCALYPEDYKIDTSELIEYWVMEGLVKG-SSKEDEMLRGRVIL 661
           LYC+LYPED+KI  +ELIEYW+ E L+    S E +M +G  IL
Sbjct: 223 LYCSLYPEDHKILVNELIEYWIAEELITDMDSVEAQMNKGHAIL 266


>gb|AFC90780.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  195 bits (495), Expect = 8e-48
 Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 5/224 (2%)
 Frame = +2

Query: 5   VTLDLSAEQDEXXXXXXXXXXXXXKGKFVLILDDIWEAFDLQDLGVPKPTKDNGCKIILT 184
           +   L  ++DE             + K+VLI+DD+WEAF L+ +G+P+P + NGCK++LT
Sbjct: 44  LNFSLLDDEDEKRRATHLYAALSRRKKYVLIIDDLWEAFPLERVGIPEPIRSNGCKLVLT 103

Query: 185 TRSREVCEGMLCQKYVKVEQLSEDEAWELF---SVNVDEKLVPDVEEIAKEVVAECCGLP 355
           TRS EVC GM CQ  VKV+ L+E+EA  LF   +V  D  L P+VEEIA ++  +C  LP
Sbjct: 104 TRSLEVCRGMECQP-VKVDFLTEEEALTLFLTMAVGHDTVLAPEVEEIAAKIAKKCACLP 162

Query: 356 LAIITI-GRSMRSKDVGEWRVALSDLKKSTSLNMDMREQVIQRLKFSYDRLREENHQKCF 532
           LA++T+ G  M  K + EWR AL++L +ST    D   +VI+RLKFSY RL  +  Q CF
Sbjct: 163 LAVVTVAGSLMGLKGICEWRDALNELIRSTKDASDDLSKVIERLKFSYSRLGNKELQDCF 222

Query: 533 LYCALYPEDYKIDTSELIEYWVMEGLVKG-SSKEDEMLRGRVIL 661
           LYC+LYPED+KI  +ELIEYW+ E L+    S E +M +G  IL
Sbjct: 223 LYCSLYPEDHKILVNELIEYWIAEELITDMDSVEAQMNKGHAIL 266


>gb|AFC90686.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  194 bits (493), Expect = 1e-47
 Identities = 104/198 (52%), Positives = 135/198 (68%), Gaps = 5/198 (2%)
 Frame = +2

Query: 83  KFVLILDDIWEAFDLQDLGVPKPTKDNGCKIILTTRSREVCEGMLCQKYVKVEQLSEDEA 262
           ++VLILDD+WEAF L+ +G+P+PT+ NGCK++LTTRS EVC  M C   V+VE L+E+EA
Sbjct: 70  RYVLILDDLWEAFPLEMVGIPEPTRSNGCKLVLTTRSFEVCRKMRCTP-VRVELLTEEEA 128

Query: 263 WELF---SVNVDEKLVPDVEEIAKEVVAECCGLPLAIITIGRSMRS-KDVGEWRVALSDL 430
             LF   +V  D  L P +EEIA ++  EC   PLAI+T+G S+R  K +GEWR AL++L
Sbjct: 129 LTLFLRKAVGNDTMLPPKLEEIATQISKECARSPLAIVTVGGSLRGLKRIGEWRNALNEL 188

Query: 431 KKSTSLNMDMREQVIQRLKFSYDRLREENHQKCFLYCALYPEDYKIDTSELIEYWVMEGL 610
             ST    D   +V +RLKFSY RL  +  Q CFLYCALYPED+KI   ELIEYW+ E L
Sbjct: 189 INSTKDASDDESEVFERLKFSYSRLGNKVLQDCFLYCALYPEDHKIRVDELIEYWIAEEL 248

Query: 611 VKG-SSKEDEMLRGRVIL 661
           +    S E +M +G  IL
Sbjct: 249 ISDMDSVEAQMNKGHAIL 266


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