BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003135
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containi...   166   5e-78
ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|2...   160   5e-76
ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containi...   154   2e-75
ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containi...   154   2e-75
ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containi...   150   4e-71

>ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  166 bits (420), Expect(2) = 5e-78
 Identities = 77/99 (77%), Positives = 90/99 (90%)
 Frame = +3

Query: 3   HKNSEVAEYATQNLLDLDPTSAAGYVQLANVYAAMNKWD*VGRVRQLMKDNKVVKSPGYS 182
           HKN E+AE+A +NLL+LDP SAAGYVQLANVYAAMN+WD V  VR+ MKDNKV+K+PGYS
Sbjct: 409 HKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYS 468

Query: 183 WIEIKSVVHEFRSGDRLHPELALIHQKLNELEKSMKLAG 299
           WIE+KSVVHEFRSGDR+HPELA IH+KLNELE+ M+LAG
Sbjct: 469 WIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAG 507



 Score =  150 bits (380), Expect(2) = 5e-78
 Identities = 68/90 (75%), Positives = 77/90 (85%)
 Frame = +2

Query: 305 PDLDFALHDVGEEQKEMLLMRHSEKLAVAFGLISSPPGTQIRVFKNLRICGDCHNAIKCI 484
           PDL++ALHDVGEEQK+ +L+RHSEKLA+A+GLI  P GT IRVFKNLR+CGDCH+A K I
Sbjct: 510 PDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYI 569

Query: 485 SDIERREIIVRDTIRFHHFRNGNCSCGDYW 574
           S IE R IIVRDT RFHHFR G CSCGDYW
Sbjct: 570 SAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599


>ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|222840806|gb|EEE78353.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score =  160 bits (404), Expect(2) = 5e-76
 Identities = 72/90 (80%), Positives = 80/90 (88%)
 Frame = +2

Query: 305 PDLDFALHDVGEEQKEMLLMRHSEKLAVAFGLISSPPGTQIRVFKNLRICGDCHNAIKCI 484
           PDL+FALHDVGEEQKE LL+ HSEKLA+A+GLI  PPGT IRVFKNLR+CGDCH AIK I
Sbjct: 480 PDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYI 539

Query: 485 SDIERREIIVRDTIRFHHFRNGNCSCGDYW 574
           S IERREIIVRDT RFHHF++G+CSC DYW
Sbjct: 540 SQIERREIIVRDTTRFHHFKDGHCSCADYW 569



 Score =  150 bits (378), Expect(2) = 5e-76
 Identities = 71/99 (71%), Positives = 83/99 (83%)
 Frame = +3

Query: 3   HKNSEVAEYATQNLLDLDPTSAAGYVQLANVYAAMNKWD*VGRVRQLMKDNKVVKSPGYS 182
           HKN+E+AE+A+Q LL+LDP SA GYVQLANVYAA  +WD V RVR+ MK  KVVK+PGYS
Sbjct: 379 HKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYS 438

Query: 183 WIEIKSVVHEFRSGDRLHPELALIHQKLNELEKSMKLAG 299
           WIE+KS+ H+FRSGD+ HPELA IH KL ELEK MKLAG
Sbjct: 439 WIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAG 477


>ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  154 bits (390), Expect(2) = 2e-75
 Identities = 71/90 (78%), Positives = 78/90 (86%)
 Frame = +2

Query: 305 PDLDFALHDVGEEQKEMLLMRHSEKLAVAFGLISSPPGTQIRVFKNLRICGDCHNAIKCI 484
           PDL+FALHDV EE KE LL+ HSEKLA+AFGL+ + PGT IRVFKNLR+CGDCH AIK I
Sbjct: 578 PDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFI 637

Query: 485 SDIERREIIVRDTIRFHHFRNGNCSCGDYW 574
           S IE+REIIVRDT RFHHFRNG CSCGDYW
Sbjct: 638 SAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  154 bits (388), Expect(2) = 2e-75
 Identities = 72/99 (72%), Positives = 85/99 (85%)
 Frame = +3

Query: 3   HKNSEVAEYATQNLLDLDPTSAAGYVQLANVYAAMNKWD*VGRVRQLMKDNKVVKSPGYS 182
           HKN ++AE+A +NLL+LDPTSA GYVQLAN+YAA NKWD V +VR++MK++ VVK PGYS
Sbjct: 477 HKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYS 536

Query: 183 WIEIKSVVHEFRSGDRLHPELALIHQKLNELEKSMKLAG 299
           WIEIKSV HEFRS DRLHPEL  IH+KLNEL+  MKLAG
Sbjct: 537 WIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAG 575


>ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  154 bits (390), Expect(2) = 2e-75
 Identities = 71/90 (78%), Positives = 78/90 (86%)
 Frame = +2

Query: 305 PDLDFALHDVGEEQKEMLLMRHSEKLAVAFGLISSPPGTQIRVFKNLRICGDCHNAIKCI 484
           PDL+FALHDV EE KE LL+ HSEKLA+AFGL+ + PGT IRVFKNLR+CGDCH AIK I
Sbjct: 578 PDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFI 637

Query: 485 SDIERREIIVRDTIRFHHFRNGNCSCGDYW 574
           S IE+REIIVRDT RFHHFRNG CSCGDYW
Sbjct: 638 SAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  154 bits (388), Expect(2) = 2e-75
 Identities = 72/99 (72%), Positives = 85/99 (85%)
 Frame = +3

Query: 3   HKNSEVAEYATQNLLDLDPTSAAGYVQLANVYAAMNKWD*VGRVRQLMKDNKVVKSPGYS 182
           HKN ++AE+A +NLL+LDPTSA GYVQLAN+YAA NKWD V +VR++MK++ VVK PGYS
Sbjct: 477 HKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYS 536

Query: 183 WIEIKSVVHEFRSGDRLHPELALIHQKLNELEKSMKLAG 299
           WIEIKSV HEFRS DRLHPEL  IH+KLNEL+  MKLAG
Sbjct: 537 WIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAG 575


>ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  150 bits (379), Expect(2) = 4e-71
 Identities = 72/99 (72%), Positives = 81/99 (81%)
 Frame = +3

Query: 3   HKNSEVAEYATQNLLDLDPTSAAGYVQLANVYAAMNKWD*VGRVRQLMKDNKVVKSPGYS 182
           HKN  +AE+A +NLL+LDPT A GYVQLANVYAA N+WD V  +R+ MKDN VVK PGYS
Sbjct: 445 HKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYS 504

Query: 183 WIEIKSVVHEFRSGDRLHPELALIHQKLNELEKSMKLAG 299
           WIEI SVVH FRS DRLHPELA IH+KL +LEK MKLAG
Sbjct: 505 WIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAG 543



 Score =  143 bits (361), Expect(2) = 4e-71
 Identities = 66/90 (73%), Positives = 74/90 (82%)
 Frame = +2

Query: 305 PDLDFALHDVGEEQKEMLLMRHSEKLAVAFGLISSPPGTQIRVFKNLRICGDCHNAIKCI 484
           PDL+F LHDVGEE KE LL+ HSEKLA+AFGL+  P G  IRVFKNLR+CGDCH+A K I
Sbjct: 546 PDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYI 605

Query: 485 SDIERREIIVRDTIRFHHFRNGNCSCGDYW 574
           S IE REIIVRDT RFHHF++G CSC DYW
Sbjct: 606 STIEGREIIVRDTTRFHHFKDGFCSCRDYW 635