BLASTX nr result

ID: Coptis25_contig00003132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003132
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517620.1| conserved hypothetical protein [Ricinus comm...   196   4e-48
ref|XP_002269799.1| PREDICTED: uncharacterized protein LOC100258...   196   4e-48
ref|XP_002524493.1| conserved hypothetical protein [Ricinus comm...   191   2e-46
ref|XP_002298254.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
gb|AFK42533.1| unknown [Lotus japonicus]                              187   3e-45

>ref|XP_002517620.1| conserved hypothetical protein [Ricinus communis]
           gi|223543252|gb|EEF44784.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  196 bits (499), Expect = 4e-48
 Identities = 96/141 (68%), Positives = 110/141 (78%)
 Frame = -1

Query: 676 AKSIITQQPQPLKNSLQIKNTASTTPNACSYTVKIKTSCSSTSFTRDQIGLAFGDAYGNQ 497
           A+SII   PQPLK+    K  A+   N+CSYTVKI TSCSST +TRDQI LAFGDAYGNQ
Sbjct: 22  ARSIIPL-PQPLKS---FKINATQNANSCSYTVKITTSCSSTRYTRDQISLAFGDAYGNQ 77

Query: 496 VYAPRLDDPSSRTFERCSTDTFQISGPCMRYKICYIYLLRMGSDGWKPDSVKIYDRNSQT 317
           VYAPRLDDP S TFE CSTDTFQI GPC  Y+ICY+YL R G DGWKP +V +Y   +++
Sbjct: 78  VYAPRLDDPYSATFESCSTDTFQIKGPC-TYQICYVYLYRSGYDGWKPKTVTVYGYYTKS 136

Query: 316 VTFNYNTFIPYGVWFGFDFCN 254
           VTF YNTFIP GVWFGF++CN
Sbjct: 137 VTFTYNTFIPNGVWFGFNYCN 157


>ref|XP_002269799.1| PREDICTED: uncharacterized protein LOC100258419 [Vitis vinifera]
           gi|296084101|emb|CBI24489.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score =  196 bits (499), Expect = 4e-48
 Identities = 97/143 (67%), Positives = 113/143 (79%), Gaps = 2/143 (1%)
 Frame = -1

Query: 679 QAKSIITQQPQPLKNS--LQIKNTASTTPNACSYTVKIKTSCSSTSFTRDQIGLAFGDAY 506
           QA+SI++Q PQ LK+     I+N  S     CS+TV IKTSCSS SFTRDQI LAFGDAY
Sbjct: 26  QAQSIVSQ-PQVLKSKDFTNIQNVGS-----CSFTVVIKTSCSSVSFTRDQISLAFGDAY 79

Query: 505 GNQVYAPRLDDPSSRTFERCSTDTFQISGPCMRYKICYIYLLRMGSDGWKPDSVKIYDRN 326
           GNQVYAPR+DDPS+RTFERCSTDTFQI+GPC  Y++C++ L R G DGWKP+SVKIY  N
Sbjct: 80  GNQVYAPRIDDPSTRTFERCSTDTFQINGPC-TYQVCHVALYRSGMDGWKPESVKIYGYN 138

Query: 325 SQTVTFNYNTFIPYGVWFGFDFC 257
           S  VTF YN F+P GVWFGFD+C
Sbjct: 139 SSPVTFYYNAFVPSGVWFGFDYC 161


>ref|XP_002524493.1| conserved hypothetical protein [Ricinus communis]
           gi|223536281|gb|EEF37933.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score =  191 bits (485), Expect = 2e-46
 Identities = 88/133 (66%), Positives = 107/133 (80%), Gaps = 1/133 (0%)
 Frame = -1

Query: 652 PQP-LKNSLQIKNTASTTPNACSYTVKIKTSCSSTSFTRDQIGLAFGDAYGNQVYAPRLD 476
           PQP L NS   K+  +    +CSYTV +KTSCSS+S+TRD+I LAFGD+YGN+VY  RLD
Sbjct: 27  PQPHLLNSFPPKSIQAANARSCSYTVVVKTSCSSSSYTRDKISLAFGDSYGNEVYLKRLD 86

Query: 475 DPSSRTFERCSTDTFQISGPCMRYKICYIYLLRMGSDGWKPDSVKIYDRNSQTVTFNYNT 296
           DPSS TF+RCS+DTFQISGPC  Y ICY+YLLR GSDGWKP+SVKIY  N++T+ F YNT
Sbjct: 87  DPSSGTFDRCSSDTFQISGPC-TYGICYLYLLRRGSDGWKPESVKIYGPNTKTINFKYNT 145

Query: 295 FIPYGVWFGFDFC 257
           F+P GVW+GF+ C
Sbjct: 146 FLPNGVWYGFNLC 158


>ref|XP_002298254.1| predicted protein [Populus trichocarpa] gi|222845512|gb|EEE83059.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  187 bits (475), Expect = 2e-45
 Identities = 92/142 (64%), Positives = 107/142 (75%)
 Frame = -1

Query: 679 QAKSIITQQPQPLKNSLQIKNTASTTPNACSYTVKIKTSCSSTSFTRDQIGLAFGDAYGN 500
           QAKS ITQ PQPL  S +I  T   T ++CSYTV I+TSCSS+ +TRD+I LAFGDAYG 
Sbjct: 22  QAKSKITQ-PQPL-TSFKINTTLQNTASSCSYTVTIRTSCSSSRYTRDRISLAFGDAYGY 79

Query: 499 QVYAPRLDDPSSRTFERCSTDTFQISGPCMRYKICYIYLLRMGSDGWKPDSVKIYDRNSQ 320
           QVY PRLDDP SRTFE CSTDTF I GPC  Y+ICY+YL R G DGWKP+S+ I    + 
Sbjct: 80  QVYVPRLDDPRSRTFESCSTDTFHIDGPC-TYQICYVYLYRNGYDGWKPESITISGYYTS 138

Query: 319 TVTFNYNTFIPYGVWFGFDFCN 254
           +VTF YNTFIP  VW+GF+ CN
Sbjct: 139 SVTFYYNTFIPNAVWYGFNHCN 160


>gb|AFK42533.1| unknown [Lotus japonicus]
          Length = 166

 Score =  187 bits (474), Expect = 3e-45
 Identities = 90/141 (63%), Positives = 104/141 (73%)
 Frame = -1

Query: 679 QAKSIITQQPQPLKNSLQIKNTASTTPNACSYTVKIKTSCSSTSFTRDQIGLAFGDAYGN 500
           QA  ++T  PQP   S +   T       CSYTV I+TSCSS S+TRD+I L+FGDAYG 
Sbjct: 18  QATLLLTDPPQP-NESFKPNLTQHQQNAGCSYTVTIRTSCSSPSYTRDRISLSFGDAYGY 76

Query: 499 QVYAPRLDDPSSRTFERCSTDTFQISGPCMRYKICYIYLLRMGSDGWKPDSVKIYDRNSQ 320
           QVY PRLDDPSSRTFERCSTDTFQI+GPC  Y+ICY+YL R G DGW P+SV +   NSQ
Sbjct: 77  QVYVPRLDDPSSRTFERCSTDTFQINGPC-TYQICYLYLYRSGYDGWIPESVTVSGYNSQ 135

Query: 319 TVTFNYNTFIPYGVWFGFDFC 257
            VTF YN FIP G+WFGFD+C
Sbjct: 136 PVTFYYNAFIPAGIWFGFDYC 156


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