BLASTX nr result
ID: Coptis25_contig00003125
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003125
(2227 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 831 0.0
ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putativ... 823 0.0
ref|XP_002322430.1| predicted protein [Populus trichocarpa] gi|2... 809 0.0
ref|XP_002318863.1| predicted protein [Populus trichocarpa] gi|2... 809 0.0
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata] 808 0.0
>ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis
vinifera]
Length = 711
Score = 831 bits (2146), Expect = 0.0
Identities = 429/592 (72%), Positives = 485/592 (81%), Gaps = 5/592 (0%)
Frame = +3
Query: 339 EVEDENG-----TSTESEHPLVISNKKQKKEKIISXXXXXXXXXXXXXXXXXXXXXXXXP 503
E++D+N TS+E P V S+ K KK+K+ P
Sbjct: 71 EIDDDNEDQMSETSSELGEP-VNSSLKAKKKKL-----------KVPEMEEEEGKAEENP 118
Query: 504 NAVSKFRISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPIL 683
NA+S FRIS PLRE LKSKGIEALFPIQAMTFDT+LDGSDLVGRARTGQGKTLAFVLPIL
Sbjct: 119 NALSNFRISEPLREKLKSKGIEALFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPIL 178
Query: 684 ESLINGPAKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPYN 863
ESLINGP + SRKTGYGR P VLVLLPTRELA QV+ DF VYGGA+GL +CCLYGG+PY
Sbjct: 179 ESLINGPNRGSRKTGYGRPPCVLVLLPTRELATQVYADFDVYGGAIGLTSCCLYGGAPYQ 238
Query: 864 PQESALKRGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILGK 1043
QE LKRGVD+V+GTPGRIKDH+ERGN+D SSLKFRVLDEADEMLRMGFV+DVELILGK
Sbjct: 239 AQEIKLKRGVDIVVGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGK 298
Query: 1044 VKDLTKVQTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSNA 1223
V+D++KVQTLLFSATLP WV+ IS RFLKP KTADLVGNEKMKASTNVRHI+LPCSS+A
Sbjct: 299 VEDVSKVQTLLFSATLPGWVKEISSRFLKPTLKTADLVGNEKMKASTNVRHIVLPCSSSA 358
Query: 1224 ISQLIPDIIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSTREVTLKGFRSG 1403
SQ+IPD+IRCYSSGGRTIIFTE KDSASEL+GLLP ARA HGDIQQS REVTL GFRSG
Sbjct: 359 RSQVIPDVIRCYSSGGRTIIFTETKDSASELAGLLPGARALHGDIQQSQREVTLSGFRSG 418
Query: 1404 KFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRSS 1583
KFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGN+G+AVML+DPR S
Sbjct: 419 KFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAVMLFDPRRS 478
Query: 1584 NVSRIEKESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXXX 1763
N+S+IE+ESGVKFEHVSAPQPAD+AK+ G +AA TIT VSDS+IP F
Sbjct: 479 NISKIERESGVKFEHVSAPQPADIAKSAGVEAAGTITQVSDSVIPAFKSAAEELLNTSGL 538
Query: 1764 XXXXXXXXXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEEK 1943
+GYTEIK+RSLL S++N+VTV LEAGKP++TPSFA+ ++RRFLPE+K
Sbjct: 539 SAVELLAKALAKASGYTEIKSRSLLASLDNHVTVLLEAGKPIYTPSFAYGVLRRFLPEDK 598
Query: 1944 VNSVKGLTLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQER 2099
V+S+KGL LTADG GAVFDV + D+D+FLAGQENAA+VS+EVLK LP LQER
Sbjct: 599 VDSIKGLALTADGNGAVFDVATEDLDAFLAGQENAANVSLEVLKALPRLQER 650
>ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223550005|gb|EEF51492.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 690
Score = 823 bits (2127), Expect = 0.0
Identities = 415/588 (70%), Positives = 489/588 (83%)
Frame = +3
Query: 336 IEVEDENGTSTESEHPLVISNKKQKKEKIISXXXXXXXXXXXXXXXXXXXXXXXXPNAVS 515
++ ED++ TS+E P+ + KK+ K+ I+ PNA+S
Sbjct: 58 LDEEDKSETSSELVEPVNLKTKKKNKKAKIADENEDGEVETAEEDH---------PNAIS 108
Query: 516 KFRISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLI 695
K+RIS LRE LKSKGI++LFPIQAMTFD +LDGSDLVGRARTGQGKTLAFVLPILES+
Sbjct: 109 KYRISESLREKLKSKGIQSLFPIQAMTFDDILDGSDLVGRARTGQGKTLAFVLPILESIT 168
Query: 696 NGPAKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPYNPQES 875
NG AK SRKTGYGR P+VLVLLPTRELA+QV DDFKVYG ++GL +CCLYGG+ Y+PQE
Sbjct: 169 NGHAKESRKTGYGRPPSVLVLLPTRELASQVFDDFKVYGESLGLTSCCLYGGASYHPQEM 228
Query: 876 ALKRGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILGKVKDL 1055
+LKRGVD+V+GTPGR+KDH+ERGN++LS LKFRVLDEADEMLRMGFV+DVELILGKV+D+
Sbjct: 229 SLKRGVDIVVGTPGRVKDHIERGNINLSYLKFRVLDEADEMLRMGFVEDVELILGKVEDV 288
Query: 1056 TKVQTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSNAISQL 1235
+KVQTLLFSATLP WV+ IS RFLK +KKT DLVGNEKMKASTNVRHIILPCS++AI Q+
Sbjct: 289 SKVQTLLFSATLPEWVKQISSRFLKASKKTIDLVGNEKMKASTNVRHIILPCSASAIPQV 348
Query: 1236 IPDIIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSTREVTLKGFRSGKFMT 1415
IPDIIRCYSSGGRTIIFTEK++SA+EL+GLL ARA HG+IQQS REVTL GFRSGKF+T
Sbjct: 349 IPDIIRCYSSGGRTIIFTEKRESANELAGLLHGARALHGEIQQSQREVTLSGFRSGKFLT 408
Query: 1416 LVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRSSNVSR 1595
LVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTG+AVMLYDPR SN+S+
Sbjct: 409 LVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNISK 468
Query: 1596 IEKESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXXXXXXX 1775
IE+ESGVKFEH++APQPAD+A+AVG AAE IT VSDS++P F
Sbjct: 469 IERESGVKFEHITAPQPADIAQAVGAVAAEKITQVSDSIVPAFKSAAEDLLNSSGLSAVE 528
Query: 1776 XXXXXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEEKVNSV 1955
AGYTEIK+RSLL+SMEN+VT+ LEAG+P++TPSFAF ++RRFLPE+KV SV
Sbjct: 529 LLAKALANAAGYTEIKSRSLLSSMENHVTLLLEAGRPIYTPSFAFGVLRRFLPEDKVESV 588
Query: 1956 KGLTLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQER 2099
KG+TLTADG GAVFDV + D+D+FLAGQ+NAA+VS+E+LK LPPLQE+
Sbjct: 589 KGMTLTADGKGAVFDVAAADIDTFLAGQDNAANVSLEILKALPPLQEK 636
>ref|XP_002322430.1| predicted protein [Populus trichocarpa] gi|222869426|gb|EEF06557.1|
predicted protein [Populus trichocarpa]
Length = 657
Score = 809 bits (2089), Expect = 0.0
Identities = 413/587 (70%), Positives = 478/587 (81%)
Frame = +3
Query: 339 EVEDENGTSTESEHPLVISNKKQKKEKIISXXXXXXXXXXXXXXXXXXXXXXXXPNAVSK 518
E E+ + TS+E P+ + KK KK K+ PNAV++
Sbjct: 40 EEEERSETSSELCEPVNLK-KKSKKAKV---------------EEEEEEVKAEDPNAVTR 83
Query: 519 FRISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLIN 698
FRIS PLRE+LK +GIEALFPIQA TF+ +L+G DLVGRARTGQGKTLAFVLPILESL+N
Sbjct: 84 FRISEPLREVLKKRGIEALFPIQARTFEDILNGGDLVGRARTGQGKTLAFVLPILESLVN 143
Query: 699 GPAKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPYNPQESA 878
G AKASRKTGYGR P+VLVLLPTRELA QV DDFKVYGGA+GL++CC+YGG+ Y PQE A
Sbjct: 144 GLAKASRKTGYGRPPSVLVLLPTRELATQVFDDFKVYGGAMGLDSCCVYGGASYQPQEFA 203
Query: 879 LKRGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILGKVKDLT 1058
LKRGVDVV+GTPGRIKDH+E+GN+DLS LKFRVLDEADEMLRMGFV+DVELILGKVKD+
Sbjct: 204 LKRGVDVVVGTPGRIKDHIEKGNIDLSLLKFRVLDEADEMLRMGFVEDVELILGKVKDVN 263
Query: 1059 KVQTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSNAISQLI 1238
KVQTLLFSATLP WV+ IS +FLKP KKT DLVGNEKMKASTNVRHI+LPCS++AI Q+I
Sbjct: 264 KVQTLLFSATLPGWVKQISSKFLKPTKKTIDLVGNEKMKASTNVRHIVLPCSTSAIPQVI 323
Query: 1239 PDIIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSTREVTLKGFRSGKFMTL 1418
PDIIRCY+SGGRTIIFTEK++SA+ELSGLLP ARA HG+IQQS REVTL GFRSGKF+TL
Sbjct: 324 PDIIRCYASGGRTIIFTEKRESANELSGLLPGARALHGEIQQSQREVTLSGFRSGKFLTL 383
Query: 1419 VATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRSSNVSRI 1598
VATNVAARGLDINDVQLIIQCEPP DVEAYIHRSGRTGRAGN+G+AVMLYDPR SN+S+I
Sbjct: 384 VATNVAARGLDINDVQLIIQCEPPNDVEAYIHRSGRTGRAGNSGVAVMLYDPRRSNISKI 443
Query: 1599 EKESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXXXXXXXX 1778
++ESGVKFEH++AP+ D+AKAVG +AAETI VSDS+IP F
Sbjct: 444 QRESGVKFEHITAPKAEDIAKAVGVEAAETIIQVSDSVIPAFKSAAEDLLNTSGLSAVEL 503
Query: 1779 XXXXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEEKVNSVK 1958
GYTEIK+RSLL+SMEN+VT+ LE+GKP++TPSFAFS++RR LPE+KV SV
Sbjct: 504 LAKALAKATGYTEIKSRSLLSSMENHVTLLLESGKPIYTPSFAFSVLRRILPEDKVESVT 563
Query: 1959 GLTLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQER 2099
G+TLT DG GAVFDV DVD+FLA QEN A V++EV+KTLP LQER
Sbjct: 564 GMTLTTDGNGAVFDVKKEDVDAFLAAQENGAGVNIEVVKTLPSLQER 610
>ref|XP_002318863.1| predicted protein [Populus trichocarpa] gi|222859536|gb|EEE97083.1|
predicted protein [Populus trichocarpa]
Length = 652
Score = 809 bits (2089), Expect = 0.0
Identities = 410/585 (70%), Positives = 476/585 (81%)
Frame = +3
Query: 345 EDENGTSTESEHPLVISNKKQKKEKIISXXXXXXXXXXXXXXXXXXXXXXXXPNAVSKFR 524
E+ + TS+E P+ + KK KK K++ PNAV++FR
Sbjct: 23 EERSETSSELGEPVNLK-KKSKKAKVVEEEEDEEEVKAED------------PNAVTRFR 69
Query: 525 ISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLINGP 704
IS PLRE LK +GIEALFPIQA TF+ +L+G DLVGRARTGQGKTLAFVLPILESL+NGP
Sbjct: 70 ISEPLREALKKRGIEALFPIQARTFEDILNGCDLVGRARTGQGKTLAFVLPILESLVNGP 129
Query: 705 AKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPYNPQESALK 884
AKASRKTGYGR P+VLVLLPTRELA QV +DFKVYGGAVGLN+CC+YGG+ Y PQE ALK
Sbjct: 130 AKASRKTGYGRPPSVLVLLPTRELATQVFEDFKVYGGAVGLNSCCVYGGASYQPQEFALK 189
Query: 885 RGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILGKVKDLTKV 1064
RGVD+V+GTPGRIKDH+E+GN+DLS LKFRVLDE+DEMLRMGFV+DVELILGKV+D+ KV
Sbjct: 190 RGVDIVVGTPGRIKDHIEKGNIDLSLLKFRVLDESDEMLRMGFVEDVELILGKVEDVRKV 249
Query: 1065 QTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSNAISQLIPD 1244
QTLLFSATLP WV+NIS RFLKP KKT DLVGNEKMKASTNVRHI+LPCS+ A+ Q+IPD
Sbjct: 250 QTLLFSATLPDWVKNISSRFLKPTKKTIDLVGNEKMKASTNVRHIVLPCSTAAMPQVIPD 309
Query: 1245 IIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSTREVTLKGFRSGKFMTLVA 1424
+I CY SGGRTIIFTEK++SA+EL+GLLP ARA HG+IQQS REVTL GFRSGKF+TLVA
Sbjct: 310 VISCYGSGGRTIIFTEKRESANELAGLLPGARALHGEIQQSKREVTLSGFRSGKFLTLVA 369
Query: 1425 TNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRSSNVSRIEK 1604
TNVAARGLDINDVQLIIQCEPP DVEAYIHRSGRTGRAGN+G+AVMLYDPR SN+S+I++
Sbjct: 370 TNVAARGLDINDVQLIIQCEPPNDVEAYIHRSGRTGRAGNSGVAVMLYDPRRSNISKIQR 429
Query: 1605 ESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXXXXXXXXXX 1784
ESGVKFEH++AP+ D+AKA G AAETIT VSDS+IP F
Sbjct: 430 ESGVKFEHITAPRAEDIAKAAGVGAAETITQVSDSVIPAFKSAAENLLSTSGLSAVELLA 489
Query: 1785 XXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEEKVNSVKGL 1964
GYTEIK+RSLLTSM+N+VT+ LE+GKP++TPSFAFS+MRR LPE+KV SV G+
Sbjct: 490 KALAKATGYTEIKSRSLLTSMDNHVTLLLESGKPIYTPSFAFSVMRRILPEDKVESVTGM 549
Query: 1965 TLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQER 2099
+LTADG GAVFDV DVD+FLA QENAA V++EV+K LP LQER
Sbjct: 550 SLTADGNGAVFDVKKEDVDTFLAAQENAAGVNIEVVKALPSLQER 594
>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
Length = 713
Score = 808 bits (2087), Expect = 0.0
Identities = 407/533 (76%), Positives = 463/533 (86%)
Frame = +3
Query: 501 PNAVSKFRISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPI 680
PNAVSK RIS PLR LK KGIE+LFPIQAMTFD VLDGSDLVGRARTGQGKTLAFVLPI
Sbjct: 128 PNAVSKLRISEPLRLKLKEKGIESLFPIQAMTFDLVLDGSDLVGRARTGQGKTLAFVLPI 187
Query: 681 LESLINGPAKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPY 860
LESLINGP K+SRKTGYGR P+VLVLLPTRELA +VH DF+VYGGA+GL++CCLYGG+PY
Sbjct: 188 LESLINGPTKSSRKTGYGRTPSVLVLLPTRELACRVHADFEVYGGAMGLSSCCLYGGAPY 247
Query: 861 NPQESALKRGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILG 1040
N QE L+RGVD+VIGTPGR+KDH+ERGN+DLS LKFRVLDEADEMLRMGFV+DVELILG
Sbjct: 248 NTQEIKLRRGVDIVIGTPGRVKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILG 307
Query: 1041 KVKDLTKVQTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSN 1220
KV+++ KVQTLLFSATLP WV++I+ +FLKP+KKTADLVGN KMKASTNVRHI+LPCS+
Sbjct: 308 KVENVNKVQTLLFSATLPDWVKHIAAQFLKPDKKTADLVGNTKMKASTNVRHIVLPCSAP 367
Query: 1221 AISQLIPDIIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSTREVTLKGFRS 1400
A SQLIPDIIRCYSSGGRTIIFTE K+SAS+L+GLLP ARA HGDIQQ+ REVTL GFRS
Sbjct: 368 ARSQLIPDIIRCYSSGGRTIIFTETKESASQLAGLLPGARALHGDIQQAQREVTLFGFRS 427
Query: 1401 GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRS 1580
GKFMTLVATNVAARGLDINDVQLIIQCE PR+VE+YIHRSGRTGRAGNTG+A LYDP+
Sbjct: 428 GKFMTLVATNVAARGLDINDVQLIIQCEFPREVESYIHRSGRTGRAGNTGVAGTLYDPKR 487
Query: 1581 SNVSRIEKESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXX 1760
SN+S+IE+ESGVKFEH+SAP+P D+AKAVG +AAE IT VSDS+IP F
Sbjct: 488 SNISKIERESGVKFEHISAPRPDDIAKAVGGEAAEMITQVSDSVIPAFKETAEELLKSSG 547
Query: 1761 XXXXXXXXXXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEE 1940
GYTEIK RSLLTSMENYVT+ LE GKP+FTPSFA+ I+RRFLPEE
Sbjct: 548 LTVVELLAKALAKAVGYTEIKQRSLLTSMENYVTLLLEIGKPIFTPSFAYGILRRFLPEE 607
Query: 1941 KVNSVKGLTLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQER 2099
KV +VKGL+LTADG GAVFDVP+ D++++L+GQENAA+VS+EVLK LP LQ+R
Sbjct: 608 KVEAVKGLSLTADGNGAVFDVPAEDLNTYLSGQENAANVSLEVLKALPRLQQR 660