BLASTX nr result

ID: Coptis25_contig00003122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003122
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284896.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   458   e-126
gb|ABK96576.1| unknown [Populus trichocarpa x Populus deltoides]      446   e-123
ref|XP_002315859.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
ref|XP_003637672.1| Gibberellin 20 oxidase [Medicago truncatula]...   422   e-116
ref|XP_002525989.1| Desacetoxyvindoline 4-hydroxylase, putative ...   414   e-113

>ref|XP_002284896.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like
            [Vitis vinifera]
          Length = 393

 Score =  458 bits (1178), Expect = e-126
 Identities = 220/388 (56%), Positives = 289/388 (74%)
 Frame = +1

Query: 25   FTQSHSKLQTYLPHQKSDPQHLKRKEMTIGGSPSTETQNYDRAKEVKEFDDSKIGVKGLV 204
            FT S S ++T    +K+ P       M   G       +YDRAKEVK+FD+SKIGVKGLV
Sbjct: 10   FTLS-SHIRTRSKKEKAQPTTAVTLMMAANGDI-----HYDRAKEVKQFDESKIGVKGLV 63

Query: 205  DSGITSIPRIFIHPPENLPKPNPTTNSNSHQIPTIDLSEPRSVTVDQIRQASRTFGFFQI 384
            DSGIT+IPRIFIHP E +     +  S SH IP I LS  RS  VDQIR+AS  FGFFQI
Sbjct: 64   DSGITTIPRIFIHPTETISDLKSSNPSGSHSIPVISLSGDRSSVVDQIRRASAEFGFFQI 123

Query: 385  TNHGIPLNVIHRMIDSVKEFNQQPTEIKSRHYSREMGRGVVFSTNFDLYQSKAASWRDTL 564
             NHGI  +V+ R + +++ FN+QPTE+K+++Y R++G GV FSTNFDLY SKAASWRDTL
Sbjct: 124  INHGISTDVLDRTVAAIRAFNEQPTEVKAQYYRRDIGTGVAFSTNFDLYHSKAASWRDTL 183

Query: 565  QVKLGPAPIKSDLLPEMCKVEIIEWDREVKRVGETLMEILSVGLGLDEKRLKQMSFLESR 744
            QV+LGP P + D +PE+C+ E++EWDRE+ R+GE LM ++  GLGLD  RLK+++ LE R
Sbjct: 184  QVRLGPTPTEFDKMPEVCRREVMEWDREMVRLGEALMGLMCEGLGLDAGRLKELTCLEGR 243

Query: 745  TMAAHYYPYCPQPDQTVGLLPHRDPGVITILLQDQIGGLQVKHGEDWINVKSIDGALVIN 924
             MA+HYYPYCPQP+ T+GL PH DPGV+T++LQ+Q+GGLQVKH   W+++  + GALVIN
Sbjct: 244  IMASHYYPYCPQPELTMGLTPHTDPGVLTVVLQNQVGGLQVKHDGAWLDLNPVPGALVIN 303

Query: 925  ISDILQMVSNGEYRSVEHRVLANPNEQPRISVGVFFNPGNREELYGPLPELVSDEKPALY 1104
            + D+LQ++SN EY+SVEHRV  NP  + R+S+ VFFNPG+R  L+GPLPEL+S EKPA+Y
Sbjct: 304  VGDMLQVMSNDEYKSVEHRVAGNPCREARVSIAVFFNPGDRHSLFGPLPELISAEKPAVY 363

Query: 1105 RQFTLTEYLGKLFSRGLDGKPFIDQFKL 1188
            + FT  E++ + F++ LDGK  I+ FKL
Sbjct: 364  KSFTFDEFMTRFFTKELDGKSLINFFKL 391


>gb|ABK96576.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 408

 Score =  446 bits (1148), Expect = e-123
 Identities = 218/397 (54%), Positives = 289/397 (72%), Gaps = 10/397 (2%)
 Frame = +1

Query: 28   TQSHSKLQTYLPHQKSDPQHLKRKEMTIGGSPSTETQNYDRAKEVKEFDDSKIGVKGLVD 207
            T SH + + Y  H K+  Q   +K +       T  Q YDR+KEVK+FDDSKIGVKGL+D
Sbjct: 13   THSHHR-EYYSCHSKTVSQKRNKKIIMAATINDTANQGYDRSKEVKQFDDSKIGVKGLID 71

Query: 208  SGITSIPRIFIHPPENLP-----KPNPTTNSNSHQIPTIDLS-----EPRSVTVDQIRQA 357
            SGITSIPRIFIHPPE L      +     +S S+ IPTID+S       RS  VD++ +A
Sbjct: 72   SGITSIPRIFIHPPETLSDLKSKRSTRLPDSESNLIPTIDISGLEDSNRRSAVVDKVGRA 131

Query: 358  SRTFGFFQITNHGIPLNVIHRMIDSVKEFNQQPTEIKSRHYSREMGRGVVFSTNFDLYQS 537
             R FGFFQ+ NHG+PL V+ R I  +K F++ PTE K R Y REMG GV F +N DL+ S
Sbjct: 132  CREFGFFQVVNHGVPLEVLDRTIGGIKGFHELPTEEKMRWYRREMGSGVSFLSNVDLFHS 191

Query: 538  KAASWRDTLQVKLGPAPIKSDLLPEMCKVEIIEWDREVKRVGETLMEILSVGLGLDEKRL 717
            KAASWRDTLQ+ LGP   + + +PE+C+ E+++W++  K++GE LME+L  GLGL+  +L
Sbjct: 192  KAASWRDTLQMTLGPNLPELEEIPEICRNELVDWNQCAKQLGEVLMELLCEGLGLNAGKL 251

Query: 718  KQMSFLESRTMAAHYYPYCPQPDQTVGLLPHRDPGVITILLQDQIGGLQVKHGEDWINVK 897
            K ++FL++RTMAAHYYPYCPQPD TVG++ H DPGV+T+LLQDQIGGLQVKHGE W++VK
Sbjct: 252  KDLTFLDARTMAAHYYPYCPQPDLTVGIMSHTDPGVLTVLLQDQIGGLQVKHGEGWVDVK 311

Query: 898  SIDGALVINISDILQMVSNGEYRSVEHRVLANPNEQPRISVGVFFNPGNREELYGPLPEL 1077
             + GA+VIN+ DI+Q++SN EY+S EHRVLAN   +PRIS+ +FFNP  R+ L+GP PEL
Sbjct: 312  PVPGAIVINVGDIMQILSNDEYKSNEHRVLANGCHEPRISIAIFFNPLKRDSLFGPFPEL 371

Query: 1078 VSDEKPALYRQFTLTEYLGKLFSRGLDGKPFIDQFKL 1188
            +S EKPA+YR+F  T+Y+ + F++ LDGK   + +KL
Sbjct: 372  ISPEKPAVYREFIYTDYIKRFFTKELDGKSLTNYYKL 408


>ref|XP_002315859.1| predicted protein [Populus trichocarpa] gi|222864899|gb|EEF02030.1|
            predicted protein [Populus trichocarpa]
          Length = 371

 Score =  439 bits (1130), Expect = e-121
 Identities = 210/364 (57%), Positives = 276/364 (75%), Gaps = 10/364 (2%)
 Frame = +1

Query: 127  TETQNYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHPPENLP-----KPNPTTNSNS 291
            T  Q YDR+KEVK+FDDSKIGVKGL+DSGITSIPRIFIHPPE L      +     +S S
Sbjct: 8    TANQEYDRSKEVKQFDDSKIGVKGLIDSGITSIPRIFIHPPETLSDLKSKRSTRLPDSES 67

Query: 292  HQIPTIDLS-----EPRSVTVDQIRQASRTFGFFQITNHGIPLNVIHRMIDSVKEFNQQP 456
            + IPTID+S       RS  VD++ +A R FGFFQ+ NHG+PL V+ R I  +K F++ P
Sbjct: 68   NLIPTIDISGLEDSNRRSAVVDKVGRACREFGFFQVVNHGVPLEVLDRTIGGIKGFHELP 127

Query: 457  TEIKSRHYSREMGRGVVFSTNFDLYQSKAASWRDTLQVKLGPAPIKSDLLPEMCKVEIIE 636
            TE K R Y REMG GV F +N DL+ SKAASWRDTLQ+ LGP   + + +PE+C+ E+++
Sbjct: 128  TEEKMRWYRREMGSGVSFLSNVDLFHSKAASWRDTLQMTLGPNLPELEEIPEICRNELVD 187

Query: 637  WDREVKRVGETLMEILSVGLGLDEKRLKQMSFLESRTMAAHYYPYCPQPDQTVGLLPHRD 816
            W++  K++GE LME+L  GLGL+  +LK ++FL++RTMAAHYYPYCPQPD TVG++ H D
Sbjct: 188  WNQCAKQLGELLMELLCEGLGLNAGKLKDLTFLDARTMAAHYYPYCPQPDLTVGIMSHTD 247

Query: 817  PGVITILLQDQIGGLQVKHGEDWINVKSIDGALVINISDILQMVSNGEYRSVEHRVLANP 996
            PGV+T+LLQDQIGGLQVKHGE W++VK + GA+VIN+ DI+Q++SN EY+S EHRVLAN 
Sbjct: 248  PGVLTVLLQDQIGGLQVKHGEGWVDVKPVPGAIVINVGDIMQILSNDEYKSNEHRVLANG 307

Query: 997  NEQPRISVGVFFNPGNREELYGPLPELVSDEKPALYRQFTLTEYLGKLFSRGLDGKPFID 1176
              +PRIS+ +FFNP  R+ L+GP PEL+S EKPA+YR+F  T+Y+ + F++ LDGK   +
Sbjct: 308  CHEPRISIAIFFNPLKRDSLFGPFPELISPEKPAVYREFIYTDYIKRFFTKELDGKSLTN 367

Query: 1177 QFKL 1188
             +KL
Sbjct: 368  YYKL 371


>ref|XP_003637672.1| Gibberellin 20 oxidase [Medicago truncatula]
            gi|355503607|gb|AES84810.1| Gibberellin 20 oxidase
            [Medicago truncatula]
          Length = 365

 Score =  422 bits (1086), Expect = e-116
 Identities = 201/351 (57%), Positives = 259/351 (73%), Gaps = 3/351 (0%)
 Frame = +1

Query: 142  YDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHPPENLPKPNPTTNSNSHQIPTIDLS- 318
            YDR K VKEFD++K+GVKGL DSGI +IP  FIHPPE L    P ++    +IPTIDLS 
Sbjct: 14   YDRVKAVKEFDETKLGVKGLTDSGIKTIPSFFIHPPETLSDLTPRSDFPQPEIPTIDLSA 73

Query: 319  --EPRSVTVDQIRQASRTFGFFQITNHGIPLNVIHRMIDSVKEFNQQPTEIKSRHYSREM 492
                RS  V+QIR A+ TFGFF++ NHG+  +++  +I ++K F++QP E K + Y REM
Sbjct: 74   VHHSRSAVVEQIRSAASTFGFFRVINHGVAPDLLQSVIGAIKAFHEQPAEEKEKVYRREM 133

Query: 493  GRGVVFSTNFDLYQSKAASWRDTLQVKLGPAPIKSDLLPEMCKVEIIEWDREVKRVGETL 672
              GV + +N DL+ SKAASWRDTL++K+GP P     +PE+C+ E+ EWD+EVKRVG+ L
Sbjct: 134  ETGVSYISNVDLFNSKAASWRDTLRIKMGPVPADEKEIPEVCRKEVKEWDKEVKRVGDIL 193

Query: 673  MEILSVGLGLDEKRLKQMSFLESRTMAAHYYPYCPQPDQTVGLLPHRDPGVITILLQDQI 852
            + +LS GLGL E+RL  M   + R M  HYYP+CPQPD TVGL  H DPG +T+LLQD I
Sbjct: 194  LGLLSEGLGLGEERLIDMGLSQGRGMVGHYYPFCPQPDLTVGLNSHTDPGALTVLLQDHI 253

Query: 853  GGLQVKHGEDWINVKSIDGALVINISDILQMVSNGEYRSVEHRVLANPNEQPRISVGVFF 1032
            GGLQV+    WINVK +DGALVINI D LQ++SN  Y+SV+HRVLANP+ +PR+S+ VFF
Sbjct: 254  GGLQVRTQHGWINVKPLDGALVINIGDFLQIISNEVYKSVDHRVLANPSNEPRVSIAVFF 313

Query: 1033 NPGNREELYGPLPELVSDEKPALYRQFTLTEYLGKLFSRGLDGKPFIDQFK 1185
            NPGNRE+L+GPLPEL S EKPALY+ F L E+L + F++ LDGK F + FK
Sbjct: 314  NPGNREKLFGPLPELTSAEKPALYKDFKLNEFLTRFFNKELDGKSFTNFFK 364


>ref|XP_002525989.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
            gi|223534721|gb|EEF36413.1| Desacetoxyvindoline
            4-hydroxylase, putative [Ricinus communis]
          Length = 361

 Score =  414 bits (1065), Expect = e-113
 Identities = 199/358 (55%), Positives = 263/358 (73%), Gaps = 6/358 (1%)
 Frame = +1

Query: 133  TQNYDRAKEVKEFDDSKIGVKGLVDSGITSIPRIFIHPPENLPKPNPTTNSNSH--QIPT 306
            T  YDR +E K+FDDSKIGVKGLVD+G+TSIPRIFIHP + L    P          IPT
Sbjct: 4    TDEYDRFEEAKKFDDSKIGVKGLVDAGLTSIPRIFIHPADTLSDIKPVNRQPEAGTTIPT 63

Query: 307  IDLS----EPRSVTVDQIRQASRTFGFFQITNHGIPLNVIHRMIDSVKEFNQQPTEIKSR 474
            ID+S    + RSV V++I +A R  GFFQI NHG+ + V+  +I  VK F++ PTE+K R
Sbjct: 64   IDISGVDSDRRSVIVEEISRACRELGFFQIVNHGVHVEVMDEVISGVKGFHELPTEVKQR 123

Query: 475  HYSREMGRGVVFSTNFDLYQSKAASWRDTLQVKLGPAPIKSDLLPEMCKVEIIEWDREVK 654
             Y RE   GV F +N DL++++AASWRDTLQ++LGP   + + +PE+C+ E+IEW +   
Sbjct: 124  WYQRETVTGVNFFSNVDLFKARAASWRDTLQIRLGPNLPEVEEIPEICRNEVIEWSQLAV 183

Query: 655  RVGETLMEILSVGLGLDEKRLKQMSFLESRTMAAHYYPYCPQPDQTVGLLPHRDPGVITI 834
            +V E LME+L  GLGL  + LK+M+ LE+R M  HYYP+CPQPD TVG+  H DPGV+T+
Sbjct: 184  QVAELLMELLCEGLGLKSETLKEMTCLEARVMVGHYYPHCPQPDLTVGITSHTDPGVLTL 243

Query: 835  LLQDQIGGLQVKHGEDWINVKSIDGALVINISDILQMVSNGEYRSVEHRVLANPNEQPRI 1014
            LLQD +GGLQVKHG++W++VK + GALVINI DILQ++SN EYRSVEHRVLANP+  PR+
Sbjct: 244  LLQDSVGGLQVKHGDEWVDVKPVPGALVINIGDILQIMSNDEYRSVEHRVLANPSRDPRV 303

Query: 1015 SVGVFFNPGNREELYGPLPELVSDEKPALYRQFTLTEYLGKLFSRGLDGKPFIDQFKL 1188
            S+ +FFNPG R+  YGP P+L+S EKPA+Y+QF L ++L + FS+ LDGK   + +KL
Sbjct: 304  SIAIFFNPGKRDCAYGPFPDLISAEKPAVYKQFMLMDFLKRFFSKELDGKTLTNYYKL 361


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