BLASTX nr result

ID: Coptis25_contig00003115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003115
         (1761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529382.1| Endosomal P24A protein precursor, putative [...   892   0.0  
ref|XP_002278700.1| PREDICTED: transmembrane 9 superfamily membe...   885   0.0  
ref|XP_002285526.1| PREDICTED: transmembrane 9 superfamily membe...   876   0.0  
emb|CAN74279.1| hypothetical protein VITISV_040146 [Vitis vinifera]   875   0.0  
ref|XP_002308404.1| predicted protein [Populus trichocarpa] gi|2...   872   0.0  

>ref|XP_002529382.1| Endosomal P24A protein precursor, putative [Ricinus communis]
            gi|223531130|gb|EEF32978.1| Endosomal P24A protein
            precursor, putative [Ricinus communis]
          Length = 640

 Score =  892 bits (2306), Expect = 0.0
 Identities = 432/510 (84%), Positives = 468/510 (91%), Gaps = 3/510 (0%)
 Frame = +2

Query: 239  WISI--LLVLFVNGNCFYLPGVAPEDFATGDLLKVKVNKLTSTKTQLPYSYYSVPYCRPD 412
            WI    L+++ V  N FYLPGVAP DF  GD LKVKVNKLTSTKTQLPYSYYS+PYC P+
Sbjct: 10   WICFCALVLVVVPCNSFYLPGVAPADFLMGDELKVKVNKLTSTKTQLPYSYYSLPYCHPE 69

Query: 413  SVVDSAENLGEVLRGDRIENSPYVFKMRVPQMCNVVCRVILDAKSAKDFKEKIDDEYRVS 592
             +VDSAENLGEVLRGDRIENSPYVFKMR PQMC ++CR+ LDAK+AK+FKEKIDDEYRV+
Sbjct: 70   RIVDSAENLGEVLRGDRIENSPYVFKMREPQMCKILCRITLDAKTAKEFKEKIDDEYRVN 129

Query: 593  MILDNLPLVVPIRRQDQESTTMYQHGFHIGLKGQYAGSQEQKHFIHNHLLFTVKYHKDLQ 772
            MILDNLPLV PI+R DQE++ +YQHGFH+GL+GQYAGS+EQKHFIHNHL FTVKYHKD Q
Sbjct: 130  MILDNLPLVFPIQRSDQENSIVYQHGFHVGLRGQYAGSKEQKHFIHNHLAFTVKYHKDAQ 189

Query: 773  TETARIVGFEVKSFSVKHEYDGEWNKD-TRLTTCDPHAKRMVTTSDSPQEVEEKKEVIFT 949
            T++ARIVGFEVK FSVKHE++GEW K+ TRLTTCDPHAKR+VT+S++PQEVE+KK++IFT
Sbjct: 190  TDSARIVGFEVKPFSVKHEFEGEWKKENTRLTTCDPHAKRLVTSSETPQEVEDKKDIIFT 249

Query: 950  YDVEFQESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISK 1129
            YDVEFQESDVKWASRWDTYLLM+DDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISK
Sbjct: 250  YDVEFQESDVKWASRWDTYLLMADDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISK 309

Query: 1130 YNQLXXXXXXXXXXGWKLVHGDVFRPPTYSDLLCVYVGTGVQFFGMILVTMIFAVLGFLS 1309
            YNQL          GWKLVHGDVFRPP  SDLLCVYVGTGVQFFGMILVTMIFA LGFLS
Sbjct: 310  YNQLETQEEAQEETGWKLVHGDVFRPPMNSDLLCVYVGTGVQFFGMILVTMIFAALGFLS 369

Query: 1310 PSNRGGLMTAMLLLWVFMGLFAGYASARLYKMFKGAEWKKLTLRTAFMFPAVCFAIFFVL 1489
            PSNRGGLMTAMLLLWVFMGLFAGY+SARLYKMFKG EWKK+TL+TA MFPA+ FAIFFVL
Sbjct: 370  PSNRGGLMTAMLLLWVFMGLFAGYSSARLYKMFKGTEWKKITLKTACMFPAIVFAIFFVL 429

Query: 1490 NALIWGEKSSGAVPFGTMFALVFLWFGISVPLVFVGSYIGFKKPAIEDPVKTNKIPRQIP 1669
            NALIWGEKSSGAVPFGTMFALVFLWFGISVPLVFVGSYIGFKKPAIEDPVKTNKIPRQIP
Sbjct: 430  NALIWGEKSSGAVPFGTMFALVFLWFGISVPLVFVGSYIGFKKPAIEDPVKTNKIPRQIP 489

Query: 1670 EQAWYMNPIFSILIGGILPFGAVFIELFFI 1759
            EQAWYMNP FSILIGGILPFGAVFIELFFI
Sbjct: 490  EQAWYMNPAFSILIGGILPFGAVFIELFFI 519


>ref|XP_002278700.1| PREDICTED: transmembrane 9 superfamily member 4 isoform 1 [Vitis
            vinifera]
          Length = 646

 Score =  885 bits (2286), Expect = 0.0
 Identities = 422/508 (83%), Positives = 465/508 (91%)
 Frame = +2

Query: 236  LWISILLVLFVNGNCFYLPGVAPEDFATGDLLKVKVNKLTSTKTQLPYSYYSVPYCRPDS 415
            LWI + L+LF +   FYLPGVAP+DF  GD LKVKVNKLTSTKTQLPYSYYS+PYCRP++
Sbjct: 18   LWIFLSLLLFPHVRSFYLPGVAPQDFNKGDPLKVKVNKLTSTKTQLPYSYYSLPYCRPET 77

Query: 416  VVDSAENLGEVLRGDRIENSPYVFKMRVPQMCNVVCRVILDAKSAKDFKEKIDDEYRVSM 595
            +VDSAENLGEVLRGDRIENSPYVFKMR PQMCNVVCR+ L+AK+AK+FKEKIDDEYRV+M
Sbjct: 78   IVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVVCRMELNAKTAKEFKEKIDDEYRVNM 137

Query: 596  ILDNLPLVVPIRRQDQESTTMYQHGFHIGLKGQYAGSQEQKHFIHNHLLFTVKYHKDLQT 775
            ILDNLPL+VP+RR DQE +T+YQHGF++GL+GQYAGS+++KHFI+NHL FTVK+HKD +T
Sbjct: 138  ILDNLPLIVPVRRPDQELSTVYQHGFYVGLRGQYAGSKDEKHFINNHLTFTVKFHKDPET 197

Query: 776  ETARIVGFEVKSFSVKHEYDGEWNKDTRLTTCDPHAKRMVTTSDSPQEVEEKKEVIFTYD 955
            +++RIVGFEVK FSVKHEY+G+W ++ RL TCDPHAKR VT SDSPQEVE+KKE+IFTYD
Sbjct: 198  DSSRIVGFEVKPFSVKHEYEGKWKENNRLLTCDPHAKRAVTNSDSPQEVEDKKEIIFTYD 257

Query: 956  VEFQESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYN 1135
            VEFQESDVKWASRWDTYLLM+DDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYN
Sbjct: 258  VEFQESDVKWASRWDTYLLMADDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYN 317

Query: 1136 QLXXXXXXXXXXGWKLVHGDVFRPPTYSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPS 1315
            QL          GWKLVHGDVFRPPT SDLLCVY GTGVQFFGMILVTMIFA LGFLSPS
Sbjct: 318  QLETQEEAQEETGWKLVHGDVFRPPTNSDLLCVYAGTGVQFFGMILVTMIFAALGFLSPS 377

Query: 1316 NRGGLMTAMLLLWVFMGLFAGYASARLYKMFKGAEWKKLTLRTAFMFPAVCFAIFFVLNA 1495
            NRGGLMTAMLLLWV MGLFAGY++ RLYKMFKG +WKK+ L+TAFMFP   FAIFFVLNA
Sbjct: 378  NRGGLMTAMLLLWVVMGLFAGYSATRLYKMFKGTDWKKIALKTAFMFPGTVFAIFFVLNA 437

Query: 1496 LIWGEKSSGAVPFGTMFALVFLWFGISVPLVFVGSYIGFKKPAIEDPVKTNKIPRQIPEQ 1675
            LIWGEKSSGAVPFGTMFALV LWFGISVPLVFVG Y+GFKKPAIEDPVKTNKIPRQIPEQ
Sbjct: 438  LIWGEKSSGAVPFGTMFALVLLWFGISVPLVFVGGYVGFKKPAIEDPVKTNKIPRQIPEQ 497

Query: 1676 AWYMNPIFSILIGGILPFGAVFIELFFI 1759
            AWYMNP+FSILIGGILPFGAVFIELFFI
Sbjct: 498  AWYMNPVFSILIGGILPFGAVFIELFFI 525


>ref|XP_002285526.1| PREDICTED: transmembrane 9 superfamily member 4 isoform 1 [Vitis
            vinifera] gi|296082138|emb|CBI21143.3| unnamed protein
            product [Vitis vinifera]
          Length = 638

 Score =  876 bits (2264), Expect = 0.0
 Identities = 419/508 (82%), Positives = 461/508 (90%)
 Frame = +2

Query: 236  LWISILLVLFVNGNCFYLPGVAPEDFATGDLLKVKVNKLTSTKTQLPYSYYSVPYCRPDS 415
            L  +ILL+L    +CFYLPGV+P+DF  GD LKVKVNKLTSTKTQLPY+YYS+PYCRP  
Sbjct: 10   LGTAILLLLIHASHCFYLPGVSPQDFQKGDPLKVKVNKLTSTKTQLPYTYYSLPYCRPGK 69

Query: 416  VVDSAENLGEVLRGDRIENSPYVFKMRVPQMCNVVCRVILDAKSAKDFKEKIDDEYRVSM 595
            +VD+AENLGEVLRGDRIENSPYVFKMR PQ+CNV+C + L+AK+AKDFKEKI+DEYRV+M
Sbjct: 70   IVDNAENLGEVLRGDRIENSPYVFKMREPQLCNVICHLKLNAKTAKDFKEKIEDEYRVNM 129

Query: 596  ILDNLPLVVPIRRQDQESTTMYQHGFHIGLKGQYAGSQEQKHFIHNHLLFTVKYHKDLQT 775
            ILDNLPLVVPIRR DQES  +YQ G+H+GLK QYAG++E+K+FIHNHL+FTVK+HKDLQT
Sbjct: 130  ILDNLPLVVPIRRLDQESPPLYQLGYHVGLKAQYAGNKEEKYFIHNHLIFTVKFHKDLQT 189

Query: 776  ETARIVGFEVKSFSVKHEYDGEWNKDTRLTTCDPHAKRMVTTSDSPQEVEEKKEVIFTYD 955
            ++ARIVGFEVK FS+KHEY+GEWN   RL TCDPH KR V  S+SPQEVE  +E++FTYD
Sbjct: 190  DSARIVGFEVKPFSIKHEYEGEWNGKNRLLTCDPHTKRTVINSNSPQEVEVNQEILFTYD 249

Query: 956  VEFQESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYN 1135
            VEFQESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYN
Sbjct: 250  VEFQESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYN 309

Query: 1136 QLXXXXXXXXXXGWKLVHGDVFRPPTYSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPS 1315
            +L          GWKLVHGDVFRPP+ SDLLCVY GTGVQFFGMIL+TM+FAVLGFLSPS
Sbjct: 310  ELETQEEAQEETGWKLVHGDVFRPPSNSDLLCVYAGTGVQFFGMILITMLFAVLGFLSPS 369

Query: 1316 NRGGLMTAMLLLWVFMGLFAGYASARLYKMFKGAEWKKLTLRTAFMFPAVCFAIFFVLNA 1495
            NRGGLMTAML LWVFMGLFAGY+SARLYKMFKGAEWKK+ LRTAFMFPA  F IFFVLNA
Sbjct: 370  NRGGLMTAMLFLWVFMGLFAGYSSARLYKMFKGAEWKKIALRTAFMFPATVFVIFFVLNA 429

Query: 1496 LIWGEKSSGAVPFGTMFALVFLWFGISVPLVFVGSYIGFKKPAIEDPVKTNKIPRQIPEQ 1675
            LIWG+KSSGAVPFGTMFALVFLWFGISVPLVFVGSY+GFKKPAIEDPVKTNKIPRQIPEQ
Sbjct: 430  LIWGQKSSGAVPFGTMFALVFLWFGISVPLVFVGSYVGFKKPAIEDPVKTNKIPRQIPEQ 489

Query: 1676 AWYMNPIFSILIGGILPFGAVFIELFFI 1759
            AWYMNP+FSILIGGILPFGAVFIELFFI
Sbjct: 490  AWYMNPMFSILIGGILPFGAVFIELFFI 517


>emb|CAN74279.1| hypothetical protein VITISV_040146 [Vitis vinifera]
          Length = 637

 Score =  875 bits (2260), Expect = 0.0
 Identities = 418/505 (82%), Positives = 459/505 (90%)
 Frame = +2

Query: 245  SILLVLFVNGNCFYLPGVAPEDFATGDLLKVKVNKLTSTKTQLPYSYYSVPYCRPDSVVD 424
            +ILL+L    +CFYLPGV+P+DF  GD LKVKVNKLTSTKTQLPY+YYS+PYCRP  +VD
Sbjct: 13   AILLLLIHAAHCFYLPGVSPQDFQKGDPLKVKVNKLTSTKTQLPYTYYSLPYCRPGKIVD 72

Query: 425  SAENLGEVLRGDRIENSPYVFKMRVPQMCNVVCRVILDAKSAKDFKEKIDDEYRVSMILD 604
            +AENLGEVLRGDRIENSPYVFKMR PQ+CNV+C + L+AK+AKDFKEKI+DEYRV+MILD
Sbjct: 73   NAENLGEVLRGDRIENSPYVFKMREPQLCNVICHLKLNAKTAKDFKEKIEDEYRVNMILD 132

Query: 605  NLPLVVPIRRQDQESTTMYQHGFHIGLKGQYAGSQEQKHFIHNHLLFTVKYHKDLQTETA 784
            NLPLVVPIRR DQES  +YQ G+H+GLK QYAG++E+K+FIHNHL+FTVK+HKDLQT++A
Sbjct: 133  NLPLVVPIRRLDQESPPLYQLGYHVGLKAQYAGNKEEKYFIHNHLIFTVKFHKDLQTDSA 192

Query: 785  RIVGFEVKSFSVKHEYDGEWNKDTRLTTCDPHAKRMVTTSDSPQEVEEKKEVIFTYDVEF 964
            RIVGFEVK FS+KHEY GEWN   RL TCDPH KR V  S+SPQEVE  +E++FTYDVEF
Sbjct: 193  RIVGFEVKPFSIKHEYXGEWNGKNRLLTCDPHTKRTVINSNSPQEVEVNQEILFTYDVEF 252

Query: 965  QESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNQLX 1144
            QESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYN+L 
Sbjct: 253  QESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELE 312

Query: 1145 XXXXXXXXXGWKLVHGDVFRPPTYSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPSNRG 1324
                     GWKLVHGDVFRPP+ SDLLCVY GTGVQFFGMIL+TM+FAVLGFLSPSNRG
Sbjct: 313  TQEEAQEETGWKLVHGDVFRPPSNSDLLCVYAGTGVQFFGMILITMLFAVLGFLSPSNRG 372

Query: 1325 GLMTAMLLLWVFMGLFAGYASARLYKMFKGAEWKKLTLRTAFMFPAVCFAIFFVLNALIW 1504
            GLMTAML LWVFMGLFAGY+SARLYKMFKGAEWKK+ LRTAFMFPA  F IFFVLNALIW
Sbjct: 373  GLMTAMLFLWVFMGLFAGYSSARLYKMFKGAEWKKIALRTAFMFPATVFVIFFVLNALIW 432

Query: 1505 GEKSSGAVPFGTMFALVFLWFGISVPLVFVGSYIGFKKPAIEDPVKTNKIPRQIPEQAWY 1684
            G+KSSGAVPFGTMFALVFLWFGISVPLVFVGSY+GFKKPAIEDPVKTNKIPRQIPEQAWY
Sbjct: 433  GQKSSGAVPFGTMFALVFLWFGISVPLVFVGSYVGFKKPAIEDPVKTNKIPRQIPEQAWY 492

Query: 1685 MNPIFSILIGGILPFGAVFIELFFI 1759
            MNP+FSILIGGILPFGAVFIELFFI
Sbjct: 493  MNPMFSILIGGILPFGAVFIELFFI 517


>ref|XP_002308404.1| predicted protein [Populus trichocarpa] gi|222854380|gb|EEE91927.1|
            predicted protein [Populus trichocarpa]
          Length = 645

 Score =  872 bits (2253), Expect = 0.0
 Identities = 421/507 (83%), Positives = 461/507 (90%), Gaps = 2/507 (0%)
 Frame = +2

Query: 245  SILLVLFVNGNC-FYLPGVAPEDFATGDLLKVKVNKLTSTKTQLPYSYYSVPYCRPDSVV 421
            S+LL+L    +C FYLPGVAP+DF+TG  LKVKVNKLTSTKTQLPYSYYS+PYC P+ +V
Sbjct: 18   SLLLLLLAYHSCSFYLPGVAPQDFSTGAELKVKVNKLTSTKTQLPYSYYSLPYCPPEHIV 77

Query: 422  DSAENLGEVLRGDRIENSPYVFKMRVPQMCNVVCRVILDAKSAKDFKEKIDDEYRVSMIL 601
            DSAENLGEVLRGDRIENSPYVF+MR P  C V+CR  L+AK+AK+FKE+IDD+YRV+MIL
Sbjct: 78   DSAENLGEVLRGDRIENSPYVFQMREPLQCKVLCRRTLNAKTAKEFKERIDDDYRVNMIL 137

Query: 602  DNLPLVVPIRRQDQESTTMYQHGFHIGLKGQYAGSQEQKHFIHNHLLFTVKYHKDLQTET 781
            DNLPLVVPIRR DQE+  +YQHGFH+GLKGQYAGS++ KHFIHNHL FTVKYHKD Q + 
Sbjct: 138  DNLPLVVPIRRSDQENAVVYQHGFHVGLKGQYAGSEDLKHFIHNHLTFTVKYHKDSQLDL 197

Query: 782  ARIVGFEVKSFSVKHEYDGEW-NKDTRLTTCDPHAKRMVTTSDSPQEVEEKKEVIFTYDV 958
            ARIVGFEVK FSVKH+YDGEW N++ RLTTCDPHA+R VT+SDSPQ +E+KK+VIFTYDV
Sbjct: 198  ARIVGFEVKPFSVKHQYDGEWKNENMRLTTCDPHARRAVTSSDSPQVIEDKKDVIFTYDV 257

Query: 959  EFQESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNQ 1138
             F+ESDVKWASRWDTYLLM+DDQIHWFS+VNSLMIVLFLSGMVAMIMLRTLYRDISKYNQ
Sbjct: 258  AFEESDVKWASRWDTYLLMADDQIHWFSVVNSLMIVLFLSGMVAMIMLRTLYRDISKYNQ 317

Query: 1139 LXXXXXXXXXXGWKLVHGDVFRPPTYSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPSN 1318
            L          GWKLVHGDVFRPPT SDLLCVYVGTGVQFFGMILVTMIFA LGFLSPSN
Sbjct: 318  LETQEEAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMILVTMIFAALGFLSPSN 377

Query: 1319 RGGLMTAMLLLWVFMGLFAGYASARLYKMFKGAEWKKLTLRTAFMFPAVCFAIFFVLNAL 1498
            RGGLMTAML LWVFMGLFAGYASARLYKMFKG +W+K+TL+TAFMFP++ FAIFFVLNAL
Sbjct: 378  RGGLMTAMLFLWVFMGLFAGYASARLYKMFKGTQWEKITLKTAFMFPSIVFAIFFVLNAL 437

Query: 1499 IWGEKSSGAVPFGTMFALVFLWFGISVPLVFVGSYIGFKKPAIEDPVKTNKIPRQIPEQA 1678
            IWGEKSSGAVPFGTMFALVFLWFGISVPLVF GSYIGFKKPAIEDPVKTNKIPRQIPEQA
Sbjct: 438  IWGEKSSGAVPFGTMFALVFLWFGISVPLVFTGSYIGFKKPAIEDPVKTNKIPRQIPEQA 497

Query: 1679 WYMNPIFSILIGGILPFGAVFIELFFI 1759
            WYMNP+FSIL GGILPFGAVFIELFFI
Sbjct: 498  WYMNPVFSILTGGILPFGAVFIELFFI 524


Top