BLASTX nr result

ID: Coptis25_contig00003110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003110
         (1638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525427.1| glutamate dehydrogenase, putative [Ricinus c...   777   0.0  
ref|XP_002319162.1| predicted protein [Populus trichocarpa] gi|2...   771   0.0  
ref|XP_003632715.1| PREDICTED: glutamate dehydrogenase 1 [Vitis ...   770   0.0  
gb|ABR45723.1| GDH1 [Actinidia chinensis]                             769   0.0  
ref|XP_002325838.1| predicted protein [Populus trichocarpa] gi|2...   768   0.0  

>ref|XP_002525427.1| glutamate dehydrogenase, putative [Ricinus communis]
            gi|223535240|gb|EEF36917.1| glutamate dehydrogenase,
            putative [Ricinus communis]
          Length = 411

 Score =  777 bits (2006), Expect = 0.0
 Identities = 375/411 (91%), Positives = 397/411 (96%)
 Frame = -2

Query: 1565 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 1386
            MNALVAT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDG+LASFVGFR+QHDN
Sbjct: 1    MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 1385 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 1206
            ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGC+PG+LSISELERL
Sbjct: 61   ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERL 120

Query: 1205 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 1026
            TRVFTQKIHDLIG+HTDVPAPDMGT PQTMAWILDEYSKFHGYSPAVVTGKP+DLGGSLG
Sbjct: 121  TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 1025 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 846
            RDAATGRGVLFATEALL E GKSISGQRFVIQGFGNVGSWAAQLI+E+GGK+VA+SD+TG
Sbjct: 181  RDAATGRGVLFATEALLNERGKSISGQRFVIQGFGNVGSWAAQLINEQGGKVVAVSDITG 240

Query: 845  AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 666
            AIKN NGIDIPSL+KH+KEN+GVKGFHGGD IDP SILVEDCD+LIPAALGGVINR+NAN
Sbjct: 241  AIKNKNGIDIPSLLKHTKENKGVKGFHGGDPIDPNSILVEDCDILIPAALGGVINRENAN 300

Query: 665  EIRAKFIIEAANHPADPEADEILSKKGVVILPDILANSGGVTVSYFEWVQNIQGFMWDEP 486
            EI+AKFIIEAANHP DPEADEILSKKGVVILPDI ANSGGVTVSYFEWVQNIQGFMWDE 
Sbjct: 301  EIKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWDEE 360

Query: 485  KVNNELRRYMTNGFNDVKEMCKTHECDLRMGAFTLGVNRVARATMLRGWEA 333
            KVNNEL+ YMT GF DVKEMCKTH CDLRMGAFTLGVNRVARAT+LRGWEA
Sbjct: 361  KVNNELKTYMTKGFKDVKEMCKTHNCDLRMGAFTLGVNRVARATVLRGWEA 411


>ref|XP_002319162.1| predicted protein [Populus trichocarpa] gi|222857538|gb|EEE95085.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  771 bits (1991), Expect = 0.0
 Identities = 371/411 (90%), Positives = 398/411 (96%)
 Frame = -2

Query: 1565 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 1386
            MNALVAT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDG+LASFVGFR+QHDN
Sbjct: 1    MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 1385 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 1206
            ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGC+PGELS+SELERL
Sbjct: 61   ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSVSELERL 120

Query: 1205 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 1026
            TRVFTQKIHDLIG+HTDVPAPDMGT PQTMAWILDEYSKFHGYSPAVVTGKP+DLGGSLG
Sbjct: 121  TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 1025 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 846
            RDAATG+GVLFATEALL E+GK+ISGQRFVIQGFGNVG+WAAQLISE+GGKIVAISD+TG
Sbjct: 181  RDAATGQGVLFATEALLNEHGKTISGQRFVIQGFGNVGAWAAQLISEQGGKIVAISDITG 240

Query: 845  AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 666
            A+KNS GIDIPSL+KH+KE+ GVKGFHGGD IDP SILVEDCD+LIPAALGGVINR+NAN
Sbjct: 241  AMKNSKGIDIPSLLKHAKEHNGVKGFHGGDPIDPKSILVEDCDILIPAALGGVINRENAN 300

Query: 665  EIRAKFIIEAANHPADPEADEILSKKGVVILPDILANSGGVTVSYFEWVQNIQGFMWDEP 486
            +I+AKFIIEAANHP DPEADEILSKKGVVILPDI ANSGGVTVSYFEWVQNIQGFMWDE 
Sbjct: 301  DIKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWDEK 360

Query: 485  KVNNELRRYMTNGFNDVKEMCKTHECDLRMGAFTLGVNRVARATMLRGWEA 333
            KVN+EL+ YMT GF DVKEMCKTH+CDLRMGAFTLGVNRVARAT+LRGWEA
Sbjct: 361  KVNSELKNYMTKGFKDVKEMCKTHDCDLRMGAFTLGVNRVARATVLRGWEA 411


>ref|XP_003632715.1| PREDICTED: glutamate dehydrogenase 1 [Vitis vinifera]
            gi|297739760|emb|CBI29942.3| unnamed protein product
            [Vitis vinifera]
          Length = 411

 Score =  770 bits (1989), Expect = 0.0
 Identities = 376/411 (91%), Positives = 395/411 (96%)
 Frame = -2

Query: 1565 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 1386
            MNALVAT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDG+LASFVGFR+QHDN
Sbjct: 1    MNALVATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 1385 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 1206
            ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGC+PGELS+SELERL
Sbjct: 61   ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSLSELERL 120

Query: 1205 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 1026
            TRVFTQKIHDLIGV TDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKP+DLGGSLG
Sbjct: 121  TRVFTQKIHDLIGVSTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 1025 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 846
            RDAATGRGVLFATEALL E+GKSI+GQRFVIQGFGNVGSWAAQLISE GGKIVA+SD+TG
Sbjct: 181  RDAATGRGVLFATEALLHEHGKSIAGQRFVIQGFGNVGSWAAQLISEHGGKIVAVSDITG 240

Query: 845  AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 666
            AIKNS GIDIPSL+KHS E+RGVKGF+G D IDP SILVEDCDVLIPAALGGVINR+NAN
Sbjct: 241  AIKNSKGIDIPSLLKHSVEHRGVKGFNGADPIDPKSILVEDCDVLIPAALGGVINRENAN 300

Query: 665  EIRAKFIIEAANHPADPEADEILSKKGVVILPDILANSGGVTVSYFEWVQNIQGFMWDEP 486
            EI+AKFIIEAANHP DPEADEILSKKGVVILPDI ANSGGVTVSYFEWVQNIQGFMWDE 
Sbjct: 301  EIKAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWDEE 360

Query: 485  KVNNELRRYMTNGFNDVKEMCKTHECDLRMGAFTLGVNRVARATMLRGWEA 333
            KVNNELR YMT GF DVKEMC+TH CDLRMGAFTLGVNRVARAT+LRGWEA
Sbjct: 361  KVNNELRTYMTRGFKDVKEMCRTHNCDLRMGAFTLGVNRVARATVLRGWEA 411


>gb|ABR45723.1| GDH1 [Actinidia chinensis]
          Length = 411

 Score =  769 bits (1985), Expect = 0.0
 Identities = 371/411 (90%), Positives = 394/411 (95%)
 Frame = -2

Query: 1565 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 1386
            MNAL AT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDG+LASFVGFR+QHDN
Sbjct: 1    MNALAATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 1385 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 1206
            ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGCDPGELSISELERL
Sbjct: 61   ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCDPGELSISELERL 120

Query: 1205 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 1026
            TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKP DLGGSLG
Sbjct: 121  TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPTDLGGSLG 180

Query: 1025 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 846
            RDAATGRGVLFATEALL E+GKSI+GQRFVIQGFGNVGSWAAQLISE GGK+VA SD+TG
Sbjct: 181  RDAATGRGVLFATEALLHEHGKSIAGQRFVIQGFGNVGSWAAQLISEIGGKVVAASDITG 240

Query: 845  AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 666
            A+KNS G+DIPSL+KH KENRGVKGFHGGD IDP++ILVE+CD+LIPAALGGVINR+NAN
Sbjct: 241  AVKNSKGLDIPSLLKHVKENRGVKGFHGGDPIDPSAILVEECDILIPAALGGVINRENAN 300

Query: 665  EIRAKFIIEAANHPADPEADEILSKKGVVILPDILANSGGVTVSYFEWVQNIQGFMWDEP 486
            +I+AKFIIEAANHP DPEADEIL+KKGVVILPDI ANSGGVTVSYFEWVQNIQGFMWDE 
Sbjct: 301  DIKAKFIIEAANHPTDPEADEILAKKGVVILPDIFANSGGVTVSYFEWVQNIQGFMWDEE 360

Query: 485  KVNNELRRYMTNGFNDVKEMCKTHECDLRMGAFTLGVNRVARATMLRGWEA 333
            KVN+EL+ YMT GF DVK MCKTH CDLRMGAFTLGVNRVARAT+LRGWEA
Sbjct: 361  KVNHELKTYMTKGFKDVKAMCKTHNCDLRMGAFTLGVNRVARATVLRGWEA 411


>ref|XP_002325838.1| predicted protein [Populus trichocarpa] gi|222862713|gb|EEF00220.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  768 bits (1983), Expect = 0.0
 Identities = 367/411 (89%), Positives = 398/411 (96%)
 Frame = -2

Query: 1565 MNALVATSRNFKRAAQLLGLDSKLEKSLLIPFREIKVECTIPKDDGSLASFVGFRIQHDN 1386
            MNALVAT+RNFKRAA+LLGLDSKLEKSLLIPFREIKVECTIPKDDG+LASFVGFR+QHDN
Sbjct: 1    MNALVATNRNFKRAAKLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 1385 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANVPYGGAKGGIGCDPGELSISELERL 1206
            ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAN+PYGGAKGGIGC+PGELS+SELERL
Sbjct: 61   ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGELSVSELERL 120

Query: 1205 TRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 1026
            TRVFTQKIHDLIG+HTDVPAPDMGT PQTMAWILDEYSKFHGYSPAVVTGKP+DLGGSLG
Sbjct: 121  TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 1025 RDAATGRGVLFATEALLQEYGKSISGQRFVIQGFGNVGSWAAQLISEKGGKIVAISDVTG 846
            RDAATGRGVLFATEALL+E+GK+ISGQRFVIQGFGNVG+WAAQLISE+GGKIVA+SD+TG
Sbjct: 181  RDAATGRGVLFATEALLKEHGKTISGQRFVIQGFGNVGAWAAQLISEQGGKIVAVSDITG 240

Query: 845  AIKNSNGIDIPSLVKHSKENRGVKGFHGGDAIDPASILVEDCDVLIPAALGGVINRDNAN 666
            AIKN+ G+DIPSL+KH+ E++GVKGFHGGD IDP SILVEDCD+LIPAALGGVINR+NA+
Sbjct: 241  AIKNNKGLDIPSLLKHANEHKGVKGFHGGDPIDPKSILVEDCDILIPAALGGVINRENAS 300

Query: 665  EIRAKFIIEAANHPADPEADEILSKKGVVILPDILANSGGVTVSYFEWVQNIQGFMWDEP 486
            +I++KFIIEAANHP DPEADEIL+KKGVVILPDI ANSGGVTVSYFEWVQNIQGFMWDE 
Sbjct: 301  DIKSKFIIEAANHPTDPEADEILTKKGVVILPDIFANSGGVTVSYFEWVQNIQGFMWDEE 360

Query: 485  KVNNELRRYMTNGFNDVKEMCKTHECDLRMGAFTLGVNRVARATMLRGWEA 333
            KVNNEL+ YMT GF DVKEMCKTH CDLRMGAFTLGVNRVARAT+LRGW A
Sbjct: 361  KVNNELKNYMTRGFKDVKEMCKTHNCDLRMGAFTLGVNRVARATVLRGWGA 411


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