BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003107
         (1842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating en...   421   e-115
emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]   407   e-111
gb|ABK95695.1| unknown [Populus trichocarpa]                          401   e-109
ref|XP_002517911.1| ubiquitin conjugating enzyme, putative [Rici...   394   e-107
emb|CBI21855.3| unnamed protein product [Vitis vinifera]              388   e-105

>ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 26-like [Vitis
            vinifera]
          Length = 511

 Score =  421 bits (1081), Expect = e-115
 Identities = 219/395 (55%), Positives = 266/395 (67%), Gaps = 3/395 (0%)
 Frame = -2

Query: 1517 LQAQFDAVDLPTGVELQLPWLEQPAKSLK-PAAMSSSTVPNPLSSHTNKEKKENLNACMQ 1341
            LQAQFD VD+P GVE  +PWL+ P  S K PA + +S  P                    
Sbjct: 146  LQAQFDNVDIPPGVEASVPWLKDPTPSEKMPAVVDTSPTP-------------------- 185

Query: 1340 QSLEDQMQQAGTXXXXXXXXXXSCIEKQNPASSNSTLSGQTDTRSENEEKNDVDILEKYR 1161
             SL+ Q  + G+             E +  A+S+ST+  Q+       + N  D+L KY 
Sbjct: 186  -SLQGQCARVGSFSDPGEK------ETKTAATSSSTVPAQSG------DGNQDDVLGKYL 232

Query: 1160 LFKQFDTVQDYSDHHFSRGDSKSKQAPQKWTKTIQQEWKILEKDLPDTIFVRVYEERMDL 981
             FKQFDTV+D+SDHHFSR     +Q P+ W K IQ+EWKILE+DLP+TIFVRVYE RMDL
Sbjct: 233  FFKQFDTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPETIFVRVYEARMDL 292

Query: 980  LRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFYYSGGLRLNPNLYDCGKVCLSLLN 801
            LRAVI+G  GTPYHDGLF FD+LFP  YP VPP V+YYSGGLRLNPNLYDCGKVCLSLLN
Sbjct: 293  LRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYYYSGGLRLNPNLYDCGKVCLSLLN 352

Query: 800  TWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNEPGYEMTAGKREGEMHAQDYNENT 621
            TW GKK E WIPG STMLQVL+SIQ L+LN KP+FNEPGYE      +GE  ++ YNE+ 
Sbjct: 353  TWNGKKTEMWIPGKSTMLQVLVSIQGLILNAKPFFNEPGYENMYVGEDGERRSKQYNEDV 412

Query: 620  FILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEACKAYMEGAQVGFSSGAG-QDMAK 444
            FILS KTM+YT+RRPPK++EDFV+GHF  RAH IL ACKAY EG+QVG     G QD+ +
Sbjct: 413  FILSLKTMVYTIRRPPKHFEDFVVGHFRQRAHDILVACKAYKEGSQVGSMVKEGTQDVNE 472

Query: 443  HVVA-SKNLKAEVSAILPRMVQAFSRNGAKDCEQF 342
            H ++ S   K  V  ++  +V  F +NG+KDCEQF
Sbjct: 473  HEMSTSHEFKEAVGKMMKTLVTNFIKNGSKDCEQF 507


>emb|CAN79081.1| hypothetical protein VITISV_004820 [Vitis vinifera]
          Length = 532

 Score =  407 bits (1046), Expect = e-111
 Identities = 218/416 (52%), Positives = 265/416 (63%), Gaps = 24/416 (5%)
 Frame = -2

Query: 1517 LQAQFDAVDLPTGVELQLPWLEQPAKSLK-PAAMSSSTVPNPLSSHTNKEKKENLNACMQ 1341
            LQAQFD VD+P GV+  +PWL+ P  S K PA + +S  P                    
Sbjct: 146  LQAQFDNVDIPPGVZASVPWLKDPTPSEKMPAVVDTSPTP-------------------- 185

Query: 1340 QSLEDQMQQAGTXXXXXXXXXXSCIEKQNPASSNSTLSGQTDTRSENEEKNDVDILEKYR 1161
             SL+ Q    G+             E +  A+S+ST+  Q+       + N  D+L KY 
Sbjct: 186  -SLQGQCAPVGSFSDPGEK------ETKTAATSSSTVPAQSG------DGNQDDVLGKYL 232

Query: 1160 LFKQFDTVQDYSDHHFSRGDSKSKQAPQKWTKTIQQEWKILEKDLP-------------- 1023
             FKQFDTV+D+SDHHFSR     +Q P+ W K IQ+EWKILE+DLP              
Sbjct: 233  FFKQFDTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPGKYRLKEGGWCTKE 292

Query: 1022 -------DTIFVRVYEERMDLLRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFYYS 864
                   +TIFVRVYE RMDLLRAVI+G  GTPYHDGLF FD+LFP  YP VPP V+YYS
Sbjct: 293  VRQGYGVETIFVRVYEARMDLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYYYS 352

Query: 863  GGLRLNPNLYDCGKVCLSLLNTWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNEPG 684
            GGLRLNPNLYDCGKVCLSLLNTW GKK E WIPG STMLQVL+SIQ L+LN KP+FNEPG
Sbjct: 353  GGLRLNPNLYDCGKVCLSLLNTWNGKKTEMWIPGKSTMLQVLVSIQGLILNAKPFFNEPG 412

Query: 683  YEMTAGKREGEMHAQDYNENTFILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEACK 504
            YE      +GE  ++ YNE+ FILS KTM+YT+RRPPK++EDFV+GHF  RAH IL ACK
Sbjct: 413  YENMYVGEDGERRSKQYNEDVFILSLKTMVYTIRRPPKHFEDFVVGHFRQRAHDILVACK 472

Query: 503  AYMEGAQVGFSSGAG-QDMAKHVVA-SKNLKAEVSAILPRMVQAFSRNGAKDCEQF 342
            AY EG+QVG     G QD+ +H ++ S   K  V  ++  +V  F +NG+KDCEQF
Sbjct: 473  AYKEGSQVGSMVKEGTQDVNEHEMSTSHEFKEAVGKMMKTLVTNFIKNGSKDCEQF 528


>gb|ABK95695.1| unknown [Populus trichocarpa]
          Length = 526

 Score =  401 bits (1031), Expect = e-109
 Identities = 214/401 (53%), Positives = 261/401 (65%), Gaps = 9/401 (2%)
 Frame = -2

Query: 1517 LQAQFDAVDLPTGVELQLPWLEQPAKSLKPAA-MSSSTVPN-PLSSHTN---KEKKENLN 1353
            +Q+QFD VDLP GVE  LPWL++PA S    +  S+ST+PN  + SHTN    E K    
Sbjct: 146  IQSQFDNVDLPPGVEATLPWLKEPASSSNMISNTSTSTIPNHTIPSHTNHNHSESKIMTT 205

Query: 1352 ACMQQSLEDQMQQAGTXXXXXXXXXXSCIEKQNPASSNSTLSGQTDTRSENEEKNDVDIL 1173
             C+ ++                        K   ++S+S     + +  E E+  + + +
Sbjct: 206  TCLSEN------------------------KWTASASSSMFPADSSSNGEVEDSGENNTM 241

Query: 1172 EKYRLFKQFDTVQDYSDHHFSRGDSKSKQAPQK-WTKTIQQEWKILEKDLPDTIFVRVYE 996
            +KYR FKQFD V+D+SDHH+ RG S S   P K W K IQ EWK LEKDLPDTIFVRVYE
Sbjct: 242  QKYRNFKQFDNVEDFSDHHY-RGTSVSDLPPPKIWAKRIQDEWKSLEKDLPDTIFVRVYE 300

Query: 995  ERMDLLRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFYYSGGLRLNPNLYDCGKVC 816
             RM+LLRAVI G  GTPYHDGLF FD +FP  YPD PP V+YYSGGLRLNPNLY+CGKVC
Sbjct: 301  TRMELLRAVIAGPAGTPYHDGLFVFDCIFPPTYPDAPPMVYYYSGGLRLNPNLYECGKVC 360

Query: 815  LSLLNTWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNEPGYEMTAGKREGEMHAQD 636
            LSLL TW GK+ E WIPG STMLQVL+SIQAL+LN KP+FNEPGYE +    EG+  ++ 
Sbjct: 361  LSLLGTWSGKETEMWIPGKSTMLQVLVSIQALILNAKPFFNEPGYESSYVGAEGDKRSKK 420

Query: 635  YNENTFILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEACKAYMEGAQVG---FSSG 465
            YNE  FILS KTMMYTLRRPPK++ED V+GHF  RAH IL ACKAY +GA VG      G
Sbjct: 421  YNEEVFILSLKTMMYTLRRPPKHFEDLVIGHFHNRAHNILVACKAYADGAIVGSVTVKDG 480

Query: 464  AGQDMAKHVVASKNLKAEVSAILPRMVQAFSRNGAKDCEQF 342
                    + AS   KA V  ++  +V  F+R G+ +CEQF
Sbjct: 481  VADVDKADMGASGEFKATVKKMINALVTNFTRFGSINCEQF 521


>ref|XP_002517911.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
            gi|223542893|gb|EEF44429.1| ubiquitin conjugating enzyme,
            putative [Ricinus communis]
          Length = 521

 Score =  394 bits (1012), Expect = e-107
 Identities = 207/397 (52%), Positives = 259/397 (65%), Gaps = 6/397 (1%)
 Frame = -2

Query: 1514 QAQFDAVDLPTGVELQLPWLEQPAKS-LKPAAMSSSTVPNPLSSHTNKEKKENLNACMQQ 1338
            Q+QFD VDLP GVE  LPWL++PA S       S+ST+ +P  S   K K   L+     
Sbjct: 136  QSQFDNVDLPAGVEASLPWLKEPANSGFNTPGTSTSTMSDPSES---KRKSVILDIA--- 189

Query: 1337 SLEDQMQQAGTXXXXXXXXXXSCIEKQNPASSNSTLSGQTDTRSENEEKNDVDILEKYRL 1158
              E + +  G+               +N +S+ +T S       +N+ K  + IL+    
Sbjct: 190  --ETKRKATGSGL------------SENNSSAATTASSSNGEEIDNKRKGVLHILKN--- 232

Query: 1157 FKQFDTVQDYSDHHFSRGDSKSKQAPQK--WTKTIQQEWKILEKDLPDTIFVRVYEERMD 984
            FKQFDTV+D+SDHH+ R +S  KQ P    W K IQ+EWKILEKDLPDTI VRVYE RM+
Sbjct: 233  FKQFDTVEDFSDHHYCRMESSDKQRPDPRGWAKRIQEEWKILEKDLPDTISVRVYESRME 292

Query: 983  LLRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFYYSGGLRLNPNLYDCGKVCLSLL 804
            LLRAVI+G  GTPYHDGLF FD LFPS YP+ PP V+YYSGGLRLNPNLY+CGKVCLSLL
Sbjct: 293  LLRAVIVGPAGTPYHDGLFVFDCLFPSTYPNAPPMVYYYSGGLRLNPNLYECGKVCLSLL 352

Query: 803  NTWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNEPGYEMTAGKREGEMHAQDYNEN 624
             TW GK+ E WIPG STMLQVL+SIQAL+LN KP+FNEPGYE +     G+  ++ YNE+
Sbjct: 353  GTWSGKQTEMWIPGRSTMLQVLVSIQALILNAKPFFNEPGYETSYAGESGDKESRKYNED 412

Query: 623  TFILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEACKAYMEGAQVG---FSSGAGQD 453
             FILS KTMMYTLRRPPKY+EDFV+ HF +RAH IL ACKAY++GA VG      G  + 
Sbjct: 413  VFILSLKTMMYTLRRPPKYFEDFVICHFYIRAHDILVACKAYLDGATVGTVAVKDGIAEI 472

Query: 452  MAKHVVASKNLKAEVSAILPRMVQAFSRNGAKDCEQF 342
                + AS   +  +      ++  F++ G+ DC +F
Sbjct: 473  NKAEMKASSEFRVTLEKTFNALITNFTKFGSIDCGKF 509


>emb|CBI21855.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  388 bits (996), Expect = e-105
 Identities = 186/282 (65%), Positives = 219/282 (77%), Gaps = 2/282 (0%)
 Frame = -2

Query: 1181 DILEKYRLFKQFDTVQDYSDHHFSRGDSKSKQAPQKWTKTIQQEWKILEKDLPDTIFVRV 1002
            D+L KY  FKQFDTV+D+SDHHFSR     +Q P+ W K IQ+EWKILE+DLP+TIFVRV
Sbjct: 187  DVLGKYLFFKQFDTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPETIFVRV 246

Query: 1001 YEERMDLLRAVIIGTPGTPYHDGLFFFDILFPSAYPDVPPQVFYYSGGLRLNPNLYDCGK 822
            YE RMDLLRAVI+G  GTPYHDGLF FD+LFP  YP VPP V+YYSGGLRLNPNLYDCGK
Sbjct: 247  YEARMDLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYYYSGGLRLNPNLYDCGK 306

Query: 821  VCLSLLNTWQGKKEEHWIPGTSTMLQVLLSIQALVLNEKPYFNEPGYEMTAGKREGEMHA 642
            VCLSLLNTW GKK E WIPG STMLQVL+SIQ L+LN KP+FNEPGYE      +GE  +
Sbjct: 307  VCLSLLNTWNGKKTEMWIPGKSTMLQVLVSIQGLILNAKPFFNEPGYENMYVGEDGERRS 366

Query: 641  QDYNENTFILSCKTMMYTLRRPPKYYEDFVMGHFLLRAHVILEACKAYMEGAQVGFSSGA 462
            + YNE+ FILS KTM+YT+RRPPK++EDFV+GHF  RAH IL ACKAY EG+QVG     
Sbjct: 367  KQYNEDVFILSLKTMVYTIRRPPKHFEDFVVGHFRQRAHDILVACKAYKEGSQVGSMVKE 426

Query: 461  G-QDMAKHVVA-SKNLKAEVSAILPRMVQAFSRNGAKDCEQF 342
            G QD+ +H ++ S   K  V  ++  +V  F +NG+KDCEQF
Sbjct: 427  GTQDVNEHEMSTSHEFKEAVGKMMKTLVTNFIKNGSKDCEQF 468