BLASTX nr result
ID: Coptis25_contig00003104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003104
(1693 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ri... 153 2e-34
emb|CBI25124.3| unnamed protein product [Vitis vinifera] 115 5e-23
ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog... 114 6e-23
ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 1... 114 6e-23
ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 1... 113 2e-22
>ref|XP_002522773.1| Pre-mRNA-splicing factor cwc23, putative [Ricinus communis]
gi|223538011|gb|EEF39624.1| Pre-mRNA-splicing factor
cwc23, putative [Ricinus communis]
Length = 289
Score = 153 bits (386), Expect = 2e-34
Identities = 107/299 (35%), Positives = 152/299 (50%)
Frame = +1
Query: 67 IDHYKVLGLPSGIQGTKLTRNDISKAFRSKALELHPDKRPNDPNANTNFQILKSSFDFLV 246
IDHY+VLGL SG +G KLT N+ISKA++ KALELHPDKR +DP+A+ NFQ LKSS++ L
Sbjct: 5 IDHYEVLGLASGEEGAKLTENEISKAYKKKALELHPDKRRDDPDAHANFQKLKSSYEILK 64
Query: 247 DEKTRKFFDGTLIHNHKQSVRKSEYEVEQRRRYQYEAEWHKRFFYETXXXXXXXXXXXXX 426
DEK RK FD L ++ V + + +R++ + E +R +
Sbjct: 65 DEKARKLFDDLLRVKRERYVHSFQRD-SKRQKMVSDLEARERAAF--------------- 108
Query: 427 MIEKKLXXXXXXXXXXXXXXXXXXXXXAMRKAAVEQVLLGLPISDSVREILTGEMIKDLL 606
+ KA E+ ++ + + + I +
Sbjct: 109 ------------------------APDPVAKAREEEDMIARKLKEEIERIRA-------M 137
Query: 607 QKPRGELKNETSNSEAQMPSWTSSIYGVDQERVLKVSWEESGHCDYSAQRLRELFEQFGE 786
+G S EA + S+ D+E++LKVSWE+ G DYSA+RL+ELF +FGE
Sbjct: 138 HANKGAHATSASKREA-VGVARESVNNTDREKMLKVSWEKGGE-DYSAERLKELFSKFGE 195
Query: 787 VEDVLIXXXXXXXXXXXXXXXXXXXXKEAATAAIMGNVLGDLSNPLLVLPLQKAAPSKF 963
VEDV+I KEAA AA G+V GDL+NPLLVLP++ A ++F
Sbjct: 196 VEDVVI-----SSSKKKRSALVQMATKEAAVAA-TGSVSGDLNNPLLVLPVKPAIATEF 248
>emb|CBI25124.3| unnamed protein product [Vitis vinifera]
Length = 341
Score = 115 bits (287), Expect = 5e-23
Identities = 57/104 (54%), Positives = 78/104 (75%), Gaps = 2/104 (1%)
Frame = +1
Query: 34 IISE--KKMVAGKIDHYKVLGLPSGIQGTKLTRNDISKAFRSKALELHPDKRPNDPNANT 207
+ISE +K++ +DHY VLGLPSG +G KL+ +ISKA+R KALELHPDKRP+DP A+
Sbjct: 47 LISELKEKIMDMNVDHYNVLGLPSGEEGAKLSEKEISKAYRVKALELHPDKRPDDPQAHA 106
Query: 208 NFQILKSSFDFLVDEKTRKFFDGTLIHNHKQSVRKSEYEVEQRR 339
NFQ LK+S++ L DEK RK FD L +Q R+++Y+V++RR
Sbjct: 107 NFQKLKTSYEILKDEKARKLFDDLLRVKREQFHRQAQYDVKRRR 150
Score = 75.1 bits (183), Expect = 5e-11
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +1
Query: 685 GVDQERVLKVSWEESGHCDYSAQRLRELFEQFGEVEDVLIXXXXXXXXXXXXXXXXXXXX 864
G+++E+VLKVSWE+ G DY+A+ LRE+F +FGEVEDV++
Sbjct: 219 GLNKEKVLKVSWEKGGE-DYTAEGLREVFAKFGEVEDVVL-----KSSRKKGSALVVMAS 272
Query: 865 KEAATAAIMGNVLGDLSNPLLVLPLQKAAPSKF 963
KEAA AA GNV G +SNPLLVLPL+ A +F
Sbjct: 273 KEAAVAA-TGNVCGHISNPLLVLPLEPAVVMEF 304
>ref|XP_004163417.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member
17-like [Cucumis sativus]
Length = 290
Score = 114 bits (286), Expect = 6e-23
Identities = 54/91 (59%), Positives = 70/91 (76%)
Frame = +1
Query: 67 IDHYKVLGLPSGIQGTKLTRNDISKAFRSKALELHPDKRPNDPNANTNFQILKSSFDFLV 246
+DHY +LGLPSG QG KLT +ISKA+R+KALELHPDKRP+DPNA+ NFQ LKSS++ L
Sbjct: 3 VDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEILK 62
Query: 247 DEKTRKFFDGTLIHNHKQSVRKSEYEVEQRR 339
DEK RK FD L +Q R+SE + ++++
Sbjct: 63 DEKARKLFDDLLRVKREQHRRQSERDSKRQK 93
Score = 73.6 bits (179), Expect = 2e-10
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +1
Query: 688 VDQERVLKVSWEESGHCDYSAQRLRELFEQFGEVEDVLIXXXXXXXXXXXXXXXXXXXXK 867
+D+ER+LKVSWE+ G DY+A++LRE+F +FGEVEDV+I K
Sbjct: 166 MDKERMLKVSWEKIGE-DYTAEKLREMFSKFGEVEDVVI-----RHNKKKGSAVIVMSSK 219
Query: 868 EAATAAIMGNVLGDLSNPLLVLPLQ 942
+AA A+ VLGDLSNPLLVLPLQ
Sbjct: 220 DAAVASTRA-VLGDLSNPLLVLPLQ 243
>ref|XP_004144862.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Cucumis
sativus]
Length = 290
Score = 114 bits (286), Expect = 6e-23
Identities = 54/91 (59%), Positives = 70/91 (76%)
Frame = +1
Query: 67 IDHYKVLGLPSGIQGTKLTRNDISKAFRSKALELHPDKRPNDPNANTNFQILKSSFDFLV 246
+DHY +LGLPSG QG KLT +ISKA+R+KALELHPDKRP+DPNA+ NFQ LKSS++ L
Sbjct: 3 VDHYAILGLPSGEQGAKLTEKEISKAYRAKALELHPDKRPDDPNAHANFQTLKSSYEILK 62
Query: 247 DEKTRKFFDGTLIHNHKQSVRKSEYEVEQRR 339
DEK RK FD L +Q R+SE + ++++
Sbjct: 63 DEKARKLFDDLLRVKREQHRRQSERDSKRQK 93
Score = 73.6 bits (179), Expect = 2e-10
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +1
Query: 688 VDQERVLKVSWEESGHCDYSAQRLRELFEQFGEVEDVLIXXXXXXXXXXXXXXXXXXXXK 867
+D+ER+LKVSWE+ G DY+A++LRE+F +FGEVEDV+I K
Sbjct: 166 MDKERMLKVSWEKIGE-DYTAEKLREMFSKFGEVEDVVI-----RHNKKKGSAVIVMSSK 219
Query: 868 EAATAAIMGNVLGDLSNPLLVLPLQ 942
+AA A+ VLGDLSNPLLVLPLQ
Sbjct: 220 DAAVASTRA-VLGDLSNPLLVLPLQ 243
>ref|XP_002275857.1| PREDICTED: dnaJ homolog subfamily C member 17-like [Vitis vinifera]
Length = 286
Score = 113 bits (282), Expect = 2e-22
Identities = 53/91 (58%), Positives = 70/91 (76%)
Frame = +1
Query: 67 IDHYKVLGLPSGIQGTKLTRNDISKAFRSKALELHPDKRPNDPNANTNFQILKSSFDFLV 246
+DHY VLGLPSG +G KL+ +ISKA+R KALELHPDKRP+DP A+ NFQ LK+S++ L
Sbjct: 5 VDHYNVLGLPSGEEGAKLSEKEISKAYRVKALELHPDKRPDDPQAHANFQKLKTSYEILK 64
Query: 247 DEKTRKFFDGTLIHNHKQSVRKSEYEVEQRR 339
DEK RK FD L +Q R+++Y+V++RR
Sbjct: 65 DEKARKLFDDLLRVKREQFHRQAQYDVKRRR 95
Score = 75.1 bits (183), Expect = 5e-11
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +1
Query: 685 GVDQERVLKVSWEESGHCDYSAQRLRELFEQFGEVEDVLIXXXXXXXXXXXXXXXXXXXX 864
G+++E+VLKVSWE+ G DY+A+ LRE+F +FGEVEDV++
Sbjct: 164 GLNKEKVLKVSWEKGGE-DYTAEGLREVFAKFGEVEDVVL-----KSSRKKGSALVVMAS 217
Query: 865 KEAATAAIMGNVLGDLSNPLLVLPLQKAAPSKF 963
KEAA AA GNV G +SNPLLVLPL+ A +F
Sbjct: 218 KEAAVAA-TGNVCGHISNPLLVLPLEPAVVMEF 249