BLASTX nr result

ID: Coptis25_contig00003100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003100
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541808.1| PREDICTED: ribokinase-like [Glycine max]           84   1e-14
ref|XP_003546737.1| PREDICTED: ribokinase-like isoform 1 [Glycin...    82   5e-14
emb|CBI20095.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002283733.1| PREDICTED: ribokinase [Vitis vinifera]             81   1e-13
emb|CAN73058.1| hypothetical protein VITISV_007599 [Vitis vinifera]    81   1e-13

>ref|XP_003541808.1| PREDICTED: ribokinase-like [Glycine max]
          Length = 361

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = -1

Query: 226 KAARDAGVQVIMDAGGTEGELPVQLLCFVDILIPNETELERLIGMPTRSFVQC-QAVLKC 50
           +AA++AGV V++DAGG +G LP QL+ FVDIL PNETEL RL GMPT SF +  QA LKC
Sbjct: 204 QAAKNAGVPVVLDAGGMDGPLPPQLINFVDILSPNETELARLTGMPTESFEEIQQAALKC 263

Query: 49  HEMAS 35
           HEM +
Sbjct: 264 HEMGA 268


>ref|XP_003546737.1| PREDICTED: ribokinase-like isoform 1 [Glycine max]
           gi|356556860|ref|XP_003546738.1| PREDICTED:
           ribokinase-like isoform 2 [Glycine max]
          Length = 363

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = -1

Query: 226 KAARDAGVQVIMDAGGTEGELPVQLLCFVDILIPNETELERLIGMPTRSFVQ-CQAVLKC 50
           +AAR+AGV V+MDAGG +G +P QLL FVDIL PNETEL RL G PT SF +  QA LKC
Sbjct: 206 QAARNAGVPVVMDAGGMDGPIPPQLLKFVDILSPNETELARLTGRPTGSFEEIAQAALKC 265

Query: 49  HEM 41
           HE+
Sbjct: 266 HEL 268


>emb|CBI20095.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/63 (68%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
 Frame = -1

Query: 226 KAARDAGVQVIMDAGGTEGELPVQLLCFVDILIPNETELERLIGMPTRSFVQ-CQAVLKC 50
           KAARDAGV VI+DAGG +  +PV+LL  VDIL PNE+EL RL  MPT SF Q  QAV KC
Sbjct: 38  KAARDAGVPVILDAGGMDAPIPVELLNVVDILSPNESELARLTRMPTESFEQISQAVAKC 97

Query: 49  HEM 41
           HEM
Sbjct: 98  HEM 100


>ref|XP_002283733.1| PREDICTED: ribokinase [Vitis vinifera]
          Length = 371

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/63 (68%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
 Frame = -1

Query: 226 KAARDAGVQVIMDAGGTEGELPVQLLCFVDILIPNETELERLIGMPTRSFVQ-CQAVLKC 50
           KAARDAGV VI+DAGG +  +PV+LL  VDIL PNE+EL RL  MPT SF Q  QAV KC
Sbjct: 214 KAARDAGVPVILDAGGMDAPIPVELLNVVDILSPNESELARLTRMPTESFEQISQAVAKC 273

Query: 49  HEM 41
           HEM
Sbjct: 274 HEM 276


>emb|CAN73058.1| hypothetical protein VITISV_007599 [Vitis vinifera]
          Length = 370

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/63 (68%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
 Frame = -1

Query: 226 KAARDAGVQVIMDAGGTEGELPVQLLCFVDILIPNETELERLIGMPTRSFVQ-CQAVLKC 50
           KAARDAGV VI+DAGG +  +PV+LL  VDIL PNE+EL RL  MPT SF Q  QAV KC
Sbjct: 213 KAARDAGVPVILDAGGMDAPIPVELLNVVDILSPNESELARLTRMPTESFEQISQAVAKC 272

Query: 49  HEM 41
           HEM
Sbjct: 273 HEM 275


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