BLASTX nr result

ID: Coptis25_contig00003097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003097
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
emb|CBI20023.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002513383.1| ATP binding protein, putative [Ricinus commu...    96   3e-18
ref|XP_003530399.1| PREDICTED: probable LRR receptor-like serine...    96   4e-18
ref|XP_002271226.2| PREDICTED: probable LRR receptor-like serine...    95   7e-18

>ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|222853580|gb|EEE91127.1|
           predicted protein [Populus trichocarpa]
          Length = 1036

 Score =  106 bits (265), Expect = 2e-21
 Identities = 45/65 (69%), Positives = 59/65 (90%)
 Frame = +3

Query: 114 FLKGNREIKDFNIRSAAGGAVNRAVQRDFKVQVSENFLEIHLFWAGKGTCCIPVQGFYGP 293
           +++G+R +KDF+I+ AAGG +N+AVQR+FKVQV+EN+L+IH FWAGKGTCCIP QG YGP
Sbjct: 547 YIQGSRVLKDFDIQKAAGGIMNQAVQREFKVQVTENYLDIHFFWAGKGTCCIPAQGTYGP 606

Query: 294 SISAI 308
           S+SAI
Sbjct: 607 SVSAI 611


>emb|CBI20023.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = +3

Query: 114 FLKGNREIKDFNIRSAAGGAVNRAVQRDFKVQVSENFLEIHLFWAGKGTCCIPVQGFYGP 293
           +++GN  +KDF+IR  AG    RAV+++FK QVSEN++EIHLFWAGKGTCC+P QG YGP
Sbjct: 184 YIQGNLVLKDFDIRKEAGEVSFRAVKKEFKAQVSENYIEIHLFWAGKGTCCVPAQGTYGP 243

Query: 294 SISAI 308
           SISAI
Sbjct: 244 SISAI 248


>ref|XP_002513383.1| ATP binding protein, putative [Ricinus communis]
           gi|223547291|gb|EEF48786.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1016

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/65 (66%), Positives = 51/65 (78%)
 Frame = +3

Query: 114 FLKGNREIKDFNIRSAAGGAVNRAVQRDFKVQVSENFLEIHLFWAGKGTCCIPVQGFYGP 293
           +++GN  +KDF+I+  AGG     V+R F  QVSEN+LEIHLFWAGKGTCCIP QG YGP
Sbjct: 532 YVQGNLVLKDFDIKKEAGGVSKLPVERSFTAQVSENYLEIHLFWAGKGTCCIPFQGTYGP 591

Query: 294 SISAI 308
           SISAI
Sbjct: 592 SISAI 596


>ref|XP_003530399.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Glycine max]
          Length = 1029

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 41/65 (63%), Positives = 52/65 (80%)
 Frame = +3

Query: 114 FLKGNREIKDFNIRSAAGGAVNRAVQRDFKVQVSENFLEIHLFWAGKGTCCIPVQGFYGP 293
           +++G R +KDF+I+  AGG   RA+QR F+ +V+EN+LEIHLFWAGKGTCCIP QG YGP
Sbjct: 543 YIQGTRVLKDFDIQKEAGGISYRAIQRQFRFEVTENYLEIHLFWAGKGTCCIPTQGTYGP 602

Query: 294 SISAI 308
            I AI
Sbjct: 603 LIQAI 607


>ref|XP_002271226.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1000

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = +3

Query: 114 FLKGNREIKDFNIRSAAGGAVNRAVQRDFKVQVSENFLEIHLFWAGKGTCCIPVQGFYGP 293
           +++G  E KDF+I   AGG V +A+++ FK  VSEN+LEIHLFWAGKGTCCIPVQG+YGP
Sbjct: 526 YIQGMLEYKDFDISREAGG-VEKALEKKFKATVSENYLEIHLFWAGKGTCCIPVQGYYGP 584

Query: 294 SISAI 308
           SISA+
Sbjct: 585 SISAL 589


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