BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003087
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001778863.1| predicted protein [Physcomitrella patens sub...   107   2e-21
emb|CAN73193.1| hypothetical protein VITISV_022287 [Vitis vinifera]   105   4e-21
ref|XP_004136606.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   105   6e-21
ref|XP_003535239.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   105   6e-21
ref|XP_003519713.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   105   6e-21

>ref|XP_001778863.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162669732|gb|EDQ56313.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 463

 Score =  107 bits (266), Expect = 2e-21
 Identities = 60/111 (54%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
 Frame = +3

Query: 36  LYSCFYYVNCSQGKKLKKMAFWGRMHMDVHVHYGAGAYICGEETALLESLEGKQGKPRLK 215
           L+ C+      +G  L K A       DV++HYGAGAYICGEETALLESLEGKQGKPRLK
Sbjct: 169 LHECY-----KEGSLLGKNACGSGYDFDVYIHYGAGAYICGEETALLESLEGKQGKPRLK 223

Query: 216 PPFPANAGLYGCPXXXXXXXXXXXXPHTTVTNVLRLHIS--------RWFS 344
           PPFPANAGLYGCP              TTVTNV  + +S         WFS
Sbjct: 224 PPFPANAGLYGCP--------------TTVTNVETVAVSPTILRRGPEWFS 260


>emb|CAN73193.1| hypothetical protein VITISV_022287 [Vitis vinifera]
          Length = 489

 Score =  105 bits (263), Expect = 4e-21
 Identities = 55/84 (65%), Positives = 58/84 (69%)
 Frame = +3

Query: 81  LKKMAFWGRMHMDVHVHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPXX 260
           L K A       DVH+HYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP  
Sbjct: 207 LGKNACXSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP-- 264

Query: 261 XXXXXXXXXXPHTTVTNVLRLHIS 332
                       TTVTNV  + +S
Sbjct: 265 ------------TTVTNVETVAVS 276


>ref|XP_004136606.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like [Cucumis sativus]
           gi|449511484|ref|XP_004163967.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like [Cucumis sativus]
          Length = 480

 Score =  105 bits (262), Expect = 6e-21
 Identities = 55/84 (65%), Positives = 58/84 (69%)
 Frame = +3

Query: 81  LKKMAFWGRMHMDVHVHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPXX 260
           L K A       DVH+HYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP  
Sbjct: 199 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP-- 256

Query: 261 XXXXXXXXXXPHTTVTNVLRLHIS 332
                       TTVTNV  + +S
Sbjct: 257 ------------TTVTNVETVAVS 268


>ref|XP_003535239.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356533375|ref|XP_003535240.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 482

 Score =  105 bits (262), Expect = 6e-21
 Identities = 55/84 (65%), Positives = 58/84 (69%)
 Frame = +3

Query: 81  LKKMAFWGRMHMDVHVHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPXX 260
           L K A       DVH+HYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP  
Sbjct: 201 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP-- 258

Query: 261 XXXXXXXXXXPHTTVTNVLRLHIS 332
                       TTVTNV  + +S
Sbjct: 259 ------------TTVTNVETVAVS 270


>ref|XP_003519713.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like [Glycine max]
          Length = 482

 Score =  105 bits (262), Expect = 6e-21
 Identities = 55/84 (65%), Positives = 58/84 (69%)
 Frame = +3

Query: 81  LKKMAFWGRMHMDVHVHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPXX 260
           L K A       DVH+HYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP  
Sbjct: 201 LGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCP-- 258

Query: 261 XXXXXXXXXXPHTTVTNVLRLHIS 332
                       TTVTNV  + +S
Sbjct: 259 ------------TTVTNVETVAVS 270