BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003083
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]         182   3e-44
ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]         178   6e-43
ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]         176   4e-42
gb|ACU21437.1| unknown [Glycine max]                                  176   4e-42
emb|CBI19236.3| unnamed protein product [Vitis vinifera]              173   2e-41

>ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 352

 Score =  182 bits (463), Expect = 3e-44
 Identities = 98/169 (57%), Positives = 121/169 (71%)
 Frame = +3

Query: 3   VVLSTLKWRMQAVTPFSFIDYFLHKINDDRPPLKLFISQSAELTLCLANGIEFLEYKPSE 182
           +VLSTLKWRMQA+TPF+F+DYFL KINDD+ PL+  I +S +L    A GI+FLE+KPSE
Sbjct: 183 LVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDFLEFKPSE 242

Query: 183 VAAAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLVQGFSPISGSVYVACAFHPS 362
           +AAAV + V+GE+Q V+  KA S  IQ V+KER+LKC+K++Q  S  SGS   + A    
Sbjct: 243 IAAAVAMYVMGETQTVDTGKATSFLIQHVEKERLLKCVKMIQELSCNSGSAKDSSASVTC 302

Query: 363 TPQSPIGVLDASCLSYKSEELTAGSGPISSCACPDAKRRKLNDTSELDL 509
            PQSPIGVLDA C SYKS++  AGS   SS   P AKRRKLN T   DL
Sbjct: 303 LPQSPIGVLDALCFSYKSDDTNAGSSVNSSHNSPVAKRRKLNKTCGADL 351


>ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 357

 Score =  178 bits (452), Expect = 6e-43
 Identities = 96/169 (56%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
 Frame = +3

Query: 3   VVLSTLKWRMQAVTPFSFIDYFLHKINDDRPPLKLFISQSAELTLCLANGIEFLEYKPSE 182
           +VLSTL+WRMQA+TPFSFID+FL+KINDD+ P+   I QS +L L    GI+FLE++PSE
Sbjct: 186 LVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSIQLILSTVRGIDFLEFRPSE 245

Query: 183 VAAAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLVQGFSPISGSVYV----ACA 350
           +AAAV +SV+GE Q V  +KA+S  IQLV+KERVLKC+KL+Q  +  SG        A  
Sbjct: 246 IAAAVAISVVGEGQTVQTEKAISVLIQLVEKERVLKCVKLIQELASNSGGGSAKGDSASV 305

Query: 351 FHPSTPQSPIGVLDASCLSYKSEELTAGS-GPISSCACPDAKRRKLNDT 494
             PS PQSPIGVL+  C SYKS++  A S    S    PDAKRRKLN T
Sbjct: 306 SVPSVPQSPIGVLNTECFSYKSDDTNAASCANTSHNNSPDAKRRKLNKT 354


>ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 355

 Score =  176 bits (445), Expect = 4e-42
 Identities = 94/168 (55%), Positives = 121/168 (72%), Gaps = 4/168 (2%)
 Frame = +3

Query: 3   VVLSTLKWRMQAVTPFSFIDYFLHKINDDRPPLKLFISQSAELTLCLANGIEFLEYKPSE 182
           +VLSTL+WRMQA+TPFSFID+FL+KINDD+ P+   I QS +L L    GI+FLE++PSE
Sbjct: 186 LVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSIQLILSTVRGIDFLEFRPSE 245

Query: 183 VAAAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLVQGFSPISGSV---YVACAF 353
           +AAAV +SV+GE Q V+ +KA+S  IQLV+KERVLKC+K++Q  +  SG       A   
Sbjct: 246 IAAAVAISVVGEGQTVHTEKAISVLIQLVEKERVLKCVKMIQELASNSGGSAKGASASVS 305

Query: 354 HPSTPQSPIGVLDASCLSYKSEELTAGSGPISS-CACPDAKRRKLNDT 494
            PS P+SP+GVL  +C SYKS++  A S   SS    PDAKRRKLN T
Sbjct: 306 VPSVPESPLGVLVTACFSYKSDDTNAASYANSSHNISPDAKRRKLNKT 353


>gb|ACU21437.1| unknown [Glycine max]
          Length = 352

 Score =  176 bits (445), Expect = 4e-42
 Identities = 93/164 (56%), Positives = 119/164 (72%)
 Frame = +3

Query: 3   VVLSTLKWRMQAVTPFSFIDYFLHKINDDRPPLKLFISQSAELTLCLANGIEFLEYKPSE 182
           +VLSTLKWRMQA+TPF+F+DYFL KINDD+ PL+  I +S +L    A GI+FLE+KPSE
Sbjct: 183 LVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDFLEFKPSE 242

Query: 183 VAAAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLVQGFSPISGSVYVACAFHPS 362
           +AAAV + V+GE+Q V+  KA+S  IQ V+KER+LKC++++Q  S  SGS   + A    
Sbjct: 243 IAAAVAMYVMGETQTVDTGKAISVLIQHVEKERLLKCVQMIQELSCNSGSAKDSSASVTC 302

Query: 363 TPQSPIGVLDASCLSYKSEELTAGSGPISSCACPDAKRRKLNDT 494
            PQSPIGVLDA C +YKS++  A S   SS   P AKRRKLN T
Sbjct: 303 LPQSPIGVLDALCFNYKSDDTNASSCVNSSHNSPVAKRRKLNKT 346


>emb|CBI19236.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  173 bits (438), Expect = 2e-41
 Identities = 93/171 (54%), Positives = 121/171 (70%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3   VVLSTLKWRMQAVTPFSFIDYFLHKINDDRPPLKLFISQSAELTLCLANGIEFLEYKPSE 182
           +VL TLKWRMQAVTPFSF+DYFL +INDD  P +  I  S +L L    GI+FLE++PSE
Sbjct: 189 LVLRTLKWRMQAVTPFSFVDYFLRRINDDEFPARTSILLSIQLILSTVKGIDFLEFRPSE 248

Query: 183 VAAAVTLSVLGESQIVNFDKAVSCFIQLVQKERVLKCLKLVQGFSPISGSV--YVACAFH 356
           +AAAV +S+ GE+Q V+ +KA+S  I+ ++KERVLKC++L+   S ISGSV      A  
Sbjct: 249 IAAAVAISIAGETQTVDIEKAISVVIEPIEKERVLKCIELMHDLSLISGSVKRSSTAASV 308

Query: 357 PSTPQSPIGVLDASCLSYKSEELTAGSGPISSCACPDAKRRKLNDTSELDL 509
           PS P +PIGVLDA+CLSYKS++ T GS   SS      K+RKLN   E++L
Sbjct: 309 PSVPHTPIGVLDAACLSYKSDDTTVGSCANSS----HNKKRKLNAPPEVEL 355