BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003059
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   194   2e-47
ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   193   2e-47
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...   193   3e-47
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   193   3e-47
ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  194 bits (492), Expect = 2e-47
 Identities = 101/219 (46%), Positives = 136/219 (62%)
 Frame = -3

Query: 657 YIPLSTVGVAGRLDLISKVHGIEQAEMYFNTISEQITKEFPVYNALLKCYVYAKSIEKAE 478
           Y  +S   VA +LDLISKVHG+EQAE YFN     + + F VY ALL CY   KS+EKAE
Sbjct: 98  YFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSL-RSFQVYGALLNCYSQKKSLEKAE 156

Query: 477 DFMQQMKQFGLAPSAHSYNVLLSLYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSAY 298
             MQ+M+  G   +  SYNV+L LYS++G++EKLD LM+EM+ENG+  D FT  IR++AY
Sbjct: 157 AIMQEMRDMGFVKTL-SYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAY 215

Query: 297 VANSDIGGLEKVFHSMEVDPNIIVDWNCYVIAANGYIKVGXXXXXXXXXXXXXXXITWKQ 118
            A SD+ G+EK+   +E DP +  DWN Y++AANGY+K                 I+ + 
Sbjct: 216 CATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRS 275

Query: 117 QRLAYVSLLTGYARARSKEDLYRIWKMYNSSVKLNNKAY 1
           +R  Y  LLT YA   +K ++YRIW +Y +  K  N  Y
Sbjct: 276 RRFGYEILLTLYATMGNKTEVYRIWNLYKTIGKFFNTGY 314


>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  193 bits (491), Expect = 2e-47
 Identities = 98/221 (44%), Positives = 144/221 (65%), Gaps = 1/221 (0%)
 Frame = -3

Query: 660 RYIPLSTVGVAGRLDLISKVHGIEQAEMYFNTISEQITKEFPVYNALLKCYVYAKSIEKA 481
           RY PLST  +A R++LI +VHG+EQ E YF+ +  Q+ K + V+ ALL CY + K ++KA
Sbjct: 91  RYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQL-KRYQVHIALLNCYAHEKCVDKA 149

Query: 480 EDFMQQMKQFGLAPSAHSYNVLLSLYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSA 301
             FMQ++K+ G A S   YN++++LY ++G++E+LD+L++EMKE GV  D+FT SIR+SA
Sbjct: 150 NAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISA 209

Query: 300 YVANSDIGGLEKVFHSMEVDPNIIVDWNCYVIAANGYIKVG-XXXXXXXXXXXXXXXITW 124
           Y A SD  G+EK+   ME +P+I++DWNCYVIAAN Y KVG                   
Sbjct: 210 YAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANV 269

Query: 123 KQQRLAYVSLLTGYARARSKEDLYRIWKMYNSSVKLNNKAY 1
           K++  A+   L  YAR   K++++RIW +Y    K+ NK +
Sbjct: 270 KKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKE-KIFNKGF 309


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  193 bits (490), Expect = 3e-47
 Identities = 98/220 (44%), Positives = 138/220 (62%)
 Frame = -3

Query: 660 RYIPLSTVGVAGRLDLISKVHGIEQAEMYFNTISEQITKEFPVYNALLKCYVYAKSIEKA 481
           RYIPL    +A R++LI KVHG+EQ E YFN I + + K + VY ALL CY   KS++KA
Sbjct: 110 RYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNL-KTYQVYIALLNCYALEKSVDKA 168

Query: 480 EDFMQQMKQFGLAPSAHSYNVLLSLYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSA 301
           E  MQ+++  G   +A  YN L+++Y ++G +EKLD LM EM+E G+  DKFTL+IR+SA
Sbjct: 169 EAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAIRLSA 228

Query: 300 YVANSDIGGLEKVFHSMEVDPNIIVDWNCYVIAANGYIKVGXXXXXXXXXXXXXXXITWK 121
           Y A S+I G++ +   ME DP II+DWN Y + A+GY+KVG               I  K
Sbjct: 229 YAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEELIDAK 288

Query: 120 QQRLAYVSLLTGYARARSKEDLYRIWKMYNSSVKLNNKAY 1
              +A+ +LL  YA  R +++L R+W +Y    K+ NK Y
Sbjct: 289 GSNVAFDNLLKLYAETRQRDELDRVWMLYKKKEKIYNKGY 328


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  193 bits (490), Expect = 3e-47
 Identities = 101/219 (46%), Positives = 135/219 (61%)
 Frame = -3

Query: 657 YIPLSTVGVAGRLDLISKVHGIEQAEMYFNTISEQITKEFPVYNALLKCYVYAKSIEKAE 478
           Y  +S   VA +LDLISKVHG+EQAE YFN     + + F VY ALL CY   KS+EKAE
Sbjct: 98  YFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSL-RSFQVYGALLNCYSQKKSLEKAE 156

Query: 477 DFMQQMKQFGLAPSAHSYNVLLSLYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSAY 298
             MQ+M+  G   +  SYNV+L LYS++G++EKLD LM+EM+ENG+  D FT  IR++AY
Sbjct: 157 AIMQEMRDMGFVKTL-SYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAY 215

Query: 297 VANSDIGGLEKVFHSMEVDPNIIVDWNCYVIAANGYIKVGXXXXXXXXXXXXXXXITWKQ 118
            A SD+ G+EK+   +E DP +  DWN Y++AANGY+K                 I+ + 
Sbjct: 216 CATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRS 275

Query: 117 QRLAYVSLLTGYARARSKEDLYRIWKMYNSSVKLNNKAY 1
           +R  Y  LLT YA   +K + YRIW +Y +  K  N  Y
Sbjct: 276 RRFGYEILLTLYATMGNKTEXYRIWNLYKTIGKFFNTGY 314


>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  187 bits (476), Expect = 1e-45
 Identities = 100/213 (46%), Positives = 130/213 (61%)
 Frame = -3

Query: 660 RYIPLSTVGVAGRLDLISKVHGIEQAEMYFNTISEQITKEFPVYNALLKCYVYAKSIEKA 481
           RY+ L++  VA RLDLISKVHGIEQ E YFN I  ++ K    Y ALL CY Y KS+EKA
Sbjct: 108 RYLALTSRAVAVRLDLISKVHGIEQVENYFNNIPTKL-KGLESYGALLNCYAYVKSVEKA 166

Query: 480 EDFMQQMKQFGLAPSAHSYNVLLSLYSKVGQYEKLDTLMEEMKENGVRPDKFTLSIRMSA 301
           E  MQ+M++ G A     + V+L+LY K G  EKLD LM EM+ENG+  DKF   IR+S+
Sbjct: 167 EAVMQRMRELGFARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSS 226

Query: 300 YVANSDIGGLEKVFHSMEVDPNIIVDWNCYVIAANGYIKVGXXXXXXXXXXXXXXXITWK 121
           Y A SD  GLEK    +E DPN+++DW  Y   ANGY KVG               IT +
Sbjct: 227 YAAASDSEGLEKTLKRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITGE 286

Query: 120 QQRLAYVSLLTGYARARSKEDLYRIWKMYNSSV 22
           ++   Y  L+T YA   +KED+ R+W+++   V
Sbjct: 287 RRSTPYDYLMTQYATTGTKEDVLRVWELHKRYV 319