BLASTX nr result
ID: Coptis25_contig00003051
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003051
(1714 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511832.1| r2r3-myb transcription factor, putative [Ric... 362 2e-97
ref|XP_002320117.1| predicted protein [Populus trichocarpa] gi|2... 360 5e-97
ref|XP_002301350.1| predicted protein [Populus trichocarpa] gi|2... 353 6e-95
ref|XP_002270529.1| PREDICTED: myb-related protein 306 isoform 1... 348 3e-93
emb|CAN75438.1| hypothetical protein VITISV_000834 [Vitis vinifera] 345 2e-92
>ref|XP_002511832.1| r2r3-myb transcription factor, putative [Ricinus communis]
gi|223549012|gb|EEF50501.1| r2r3-myb transcription
factor, putative [Ricinus communis]
Length = 308
Score = 362 bits (929), Expect = 2e-97
Identities = 191/311 (61%), Positives = 220/311 (70%), Gaps = 5/311 (1%)
Frame = -2
Query: 1344 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1165
MGR PCC+K+GLKKGPWTPEEDE+LV YIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY
Sbjct: 1 MGRTPCCDKKGLKKGPWTPEEDEVLVSYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 60
Query: 1164 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 985
LRPDIKRGPFT+EEEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLL MG
Sbjct: 61 LRPDIKRGPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCMG 120
Query: 984 LDPHTHSPSSPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVEK 805
LDP TH P + GP + A P+TRHMAQWESARLEAEARLS+ES +F N + +K
Sbjct: 121 LDPQTHEPFTSCGPYITAPASPATRHMAQWESARLEAEARLSRESSLF-----NPPTPKK 175
Query: 804 PDCDYFLRIWNSEVGKSFRRL----AAQETXXXXXXXXXXSTKYGVCSGV-SAEVKQFNA 640
DCDYFLRIWNSEVG+SFR+ A STKYG S + + ++ A
Sbjct: 176 TDCDYFLRIWNSEVGESFRKFHRGDKASCQSPASASQASSSTKYGSVSALTTVDISPNIA 235
Query: 639 GACTEVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEIS 460
G+ T S+Q+ED E KSCK Y + + AG DFP +++S
Sbjct: 236 GSSTPPSDQIEDTECKSCK--SYVEDMNAGSDSSSSIELEDSSDSTLQLLLDFPINNDMS 293
Query: 459 FFQGHINNYSS 427
F +G N+Y S
Sbjct: 294 FLEG--NSYFS 302
>ref|XP_002320117.1| predicted protein [Populus trichocarpa] gi|222860890|gb|EEE98432.1|
predicted protein [Populus trichocarpa]
Length = 316
Score = 360 bits (925), Expect = 5e-97
Identities = 186/309 (60%), Positives = 217/309 (70%), Gaps = 3/309 (0%)
Frame = -2
Query: 1344 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1165
MGR PCC+K GLKKG WTPEEDE+LV YIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY
Sbjct: 1 MGRTPCCDKNGLKKGAWTPEEDELLVSYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 60
Query: 1164 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 985
LRPDIKR PFT+EEEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLL +G
Sbjct: 61 LRPDIKRHPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCLG 120
Query: 984 LDPHTHSPSSPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVEK 805
LDP TH P + GP A P+TRHM QWESARLEAEARLS+ES +F K
Sbjct: 121 LDPQTHEPFTSRGPANKGPASPATRHMTQWESARLEAEARLSRESSLFLPPIPG-----K 175
Query: 804 PDCDYFLRIWNSEVGKSFRRL---AAQETXXXXXXXXXXSTKYGVCSGVSAEVKQFNAGA 634
DCDYFLRIWNSEVG+SFRR+ A+ STK G S ++A++ AG+
Sbjct: 176 IDCDYFLRIWNSEVGESFRRINMGGAKTACPSPVSQASSSTKCGSISAITADISPNLAGS 235
Query: 633 CTEVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEISFF 454
SNQ EDME KSC+ + + V+AG DFP +++SF
Sbjct: 236 SAAASNQNEDMECKSCRSD--AEDVMAGPDSSSSAESEDSTDSTLQLLLDFPINNDMSFL 293
Query: 453 QGHINNYSS 427
+G+I++Y++
Sbjct: 294 EGNIDSYAT 302
>ref|XP_002301350.1| predicted protein [Populus trichocarpa] gi|222843076|gb|EEE80623.1|
predicted protein [Populus trichocarpa]
Length = 315
Score = 353 bits (907), Expect = 6e-95
Identities = 187/309 (60%), Positives = 218/309 (70%), Gaps = 3/309 (0%)
Frame = -2
Query: 1344 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1165
MGR PCC+K+GLKKGPWTPEED++LV YIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY
Sbjct: 1 MGRTPCCDKKGLKKGPWTPEEDDLLVTYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 60
Query: 1164 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 985
LRPDIKRGPFT+EEEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLL +G
Sbjct: 61 LRPDIKRGPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCLG 120
Query: 984 LDPHTHSPSSPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVEK 805
LDP TH P S GP A P+TRHMAQWESARLEAE RLS+ES +F VEK
Sbjct: 121 LDPQTHEPFSSRGPVNKGPASPATRHMAQWESARLEAEKRLSRESSLFLPPM-----VEK 175
Query: 804 PDCDYFLRIWNSEVGKSFRRLAA---QETXXXXXXXXXXSTKYGVCSGVSAEVKQFNAGA 634
DCD+FLRIWNSEVG+SFRR+ + STK G S +SA++ + +
Sbjct: 176 IDCDHFLRIWNSEVGESFRRINMGDNKTACQSPVSQASSSTKCGSISAISADIIPNLSRS 235
Query: 633 CTEVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEISFF 454
SNQ EDME+KS K Y + V+AG DFP +++SF
Sbjct: 236 PATASNQNEDMEWKSPK--SYAEDVLAG-SDSSSAELEDLTDSTLQLLLDFPINNDMSFL 292
Query: 453 QGHINNYSS 427
+I++Y++
Sbjct: 293 DKNIDSYAT 301
>ref|XP_002270529.1| PREDICTED: myb-related protein 306 isoform 1 [Vitis vinifera]
gi|297745245|emb|CBI40325.3| unnamed protein product
[Vitis vinifera]
Length = 302
Score = 348 bits (892), Expect = 3e-93
Identities = 184/316 (58%), Positives = 212/316 (67%), Gaps = 1/316 (0%)
Frame = -2
Query: 1344 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1165
MGR PCC+K+GLKKGPWTPEED+ILVDYI KNGHGSWRSLPK AGLLRCGKSCRLRWTNY
Sbjct: 1 MGRTPCCDKRGLKKGPWTPEEDQILVDYINKNGHGSWRSLPKNAGLLRCGKSCRLRWTNY 60
Query: 1164 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 985
LRPDIKRGPFT +EEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLLGMG
Sbjct: 61 LRPDIKRGPFTTDEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLGMG 120
Query: 984 LDPHTHSPS-SPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVE 808
LDP TH PS + GP + PSTRHMAQWESARLEAEARLS+ESL+ L
Sbjct: 121 LDPQTHEPSATSCGPIAKPPSSPSTRHMAQWESARLEAEARLSRESLLSNPPPPPL--GR 178
Query: 807 KPDCDYFLRIWNSEVGKSFRRLAAQETXXXXXXXXXXSTKYGVCSGVSAEVKQFNAGACT 628
D DYFLR+WNSEVG+SFR + T STK G SGV+ C
Sbjct: 179 NNDSDYFLRLWNSEVGESFRNKGQKPTCQSPVSQASSSTKCGSVSGVT------TMETCP 232
Query: 627 EVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEISFFQG 448
VSN++ED +AG DFP +++SF +G
Sbjct: 233 TVSNKIEDT----------PQNAMAGSDCSSTNELEDSSDTALQLLFDFPVNNDMSFLEG 282
Query: 447 HINNYSSMFPSLMMES 400
+++ Y + FP+++ ES
Sbjct: 283 NLDTYPT-FPAMLSES 297
>emb|CAN75438.1| hypothetical protein VITISV_000834 [Vitis vinifera]
Length = 302
Score = 345 bits (886), Expect = 2e-92
Identities = 183/316 (57%), Positives = 211/316 (66%), Gaps = 1/316 (0%)
Frame = -2
Query: 1344 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1165
MGR PCC+K+GLKKGPWTPEED+ILVDYI KNGHGSWRSLPK AGLLRCGKSCRLRWTNY
Sbjct: 1 MGRTPCCDKRGLKKGPWTPEEDQILVDYINKNGHGSWRSLPKNAGLLRCGKSCRLRWTNY 60
Query: 1164 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 985
LRPDIKRGPFT +EEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLLGMG
Sbjct: 61 LRPDIKRGPFTTDEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLGMG 120
Query: 984 LDPHTHSPS-SPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVE 808
LDP TH PS + GP + PSTRHMAQWESARLEAEARLS+ESL+ L
Sbjct: 121 LDPQTHEPSATSCGPIAKPPSSPSTRHMAQWESARLEAEARLSRESLLSNPPPPPL--GR 178
Query: 807 KPDCDYFLRIWNSEVGKSFRRLAAQETXXXXXXXXXXSTKYGVCSGVSAEVKQFNAGACT 628
D DYFLR+WNSEVG+SFR + STK G SGV+ C
Sbjct: 179 NNDSDYFLRLWNSEVGESFRNKGQKPXCQSPVSQASSSTKCGSVSGVT------TMETCP 232
Query: 627 EVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEISFFQG 448
VSN++ED +AG DFP +++SF +G
Sbjct: 233 TVSNKIEDT----------PQNAMAGSDCSSTNELEDSSDTALQLLFDFPVNNDMSFLEG 282
Query: 447 HINNYSSMFPSLMMES 400
+++ Y + FP+++ ES
Sbjct: 283 NLDTYPT-FPAMLSES 297