BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003043
         (1512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281446.1| PREDICTED: riboflavin biosynthesis protein r...   440   e-171
ref|XP_002534352.1| GTP cyclohydrolase II, putative [Ricinus com...   427   e-166
ref|XP_003547454.1| PREDICTED: riboflavin biosynthesis protein r...   418   e-163
ref|XP_002299894.1| predicted protein [Populus trichocarpa] gi|2...   408   e-161
ref|XP_003597321.1| Riboflavin biosynthesis protein ribBA [Medic...   404   e-156

>ref|XP_002281446.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic
            [Vitis vinifera] gi|297746140|emb|CBI16196.3| unnamed
            protein product [Vitis vinifera]
          Length = 519

 Score =  440 bits (1132), Expect(2) = e-171
 Identities = 237/357 (66%), Positives = 272/357 (76%), Gaps = 4/357 (1%)
 Frame = +2

Query: 104  MICLLLQRPLAPQIAINSCFHCSIASSQSLIIR----LNRNNFLKYGCQAIDVNRVGGGD 271
            M  +L   PL P I I+S F  S+A+ QS+ +     L+R+ +    C A+ V+ VG G+
Sbjct: 1    MDSVLFPHPLFPHIFISSSFPRSLAAPQSIGVGIGVGLSRHRWCST-CWAVGVSGVGAGN 59

Query: 272  LLDEGSVLSNQNGSILESLNESTKATFRTLNAEITQETIDFFVSDAKGDPDCPTEGFSSI 451
            + D+  + +N+NGS+L +L   T A F TL+AEIT ETIDFFVSDA+GDPD P+EGFSSI
Sbjct: 60   VFDKIPLKANENGSVLGALEGPTSAPFGTLDAEITPETIDFFVSDAEGDPDSPSEGFSSI 119

Query: 452  EQALNTLPQGKFVIAVDDEKEDVEGNLVMAASLIKPQTMSFMVKHGSGIVSVGMKEEDLE 631
            EQALNTL QGKFVI VDDE    EGNLVMAASL  P+ M+FMVKHGSGIVSVGMKEE LE
Sbjct: 120  EQALNTLRQGKFVIVVDDEIGKAEGNLVMAASLTSPRDMAFMVKHGSGIVSVGMKEEHLE 179

Query: 632  RXXXXXXXXXXXXXXXXXXAYTVTVDAKVGVSTGVSASDRAKTVLALSSSHSKPEDFRRP 811
            R                   +T+TVDAK G STGVSASDRAKTVLALSS  S P+DFRRP
Sbjct: 180  RLKLPLMSPDSEDKDSSAPTFTITVDAKAGTSTGVSASDRAKTVLALSSPISTPQDFRRP 239

Query: 812  GHVFPLMYRNGGVLSRAGHTEASVDLVSLAGLPPISALSAIIDAEDGSIARLPFLRKMAL 991
            GHVFPL YR GGVL RAGHTEASVDLV LAGL PIS LSAI+D +DGSIA LP LRK+AL
Sbjct: 240  GHVFPLKYREGGVLRRAGHTEASVDLVMLAGLQPISVLSAIVDGDDGSIATLPSLRKLAL 299

Query: 992  EYGLPIVSITDLIRYRRKREKLVERIAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVK 1162
            E+ +P+VSITDLIRYRRKREKLVER A+SRLPTKWGLFQAYCYRSKLDGTEH+AIVK
Sbjct: 300  EHSIPMVSITDLIRYRRKREKLVERTAISRLPTKWGLFQAYCYRSKLDGTEHVAIVK 356



 Score =  189 bits (480), Expect(2) = e-171
 Identities = 90/104 (86%), Positives = 98/104 (94%)
 Frame = +1

Query: 1201 GSIRDGQDILVRVHSECLTGDIFGSARCDCGSQLALAVQVVEQAGRGVVLYLRGHEGRGI 1380
            GSI  GQD+LVRVHSECLTGDIFGSARCDCG+QL LA+Q+VEQAGRGVV+YLRGHEGRGI
Sbjct: 357  GSIGQGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQLVEQAGRGVVVYLRGHEGRGI 416

Query: 1381 GLGHKLMAYNLQDQGHDTVEANLELGFSADARDYGIGAQILRDI 1512
            GLGHKL AYNLQD+GHDTVEANLELG + DAR+YGIGAQILRDI
Sbjct: 417  GLGHKLRAYNLQDEGHDTVEANLELGLAVDAREYGIGAQILRDI 460


>ref|XP_002534352.1| GTP cyclohydrolase II, putative [Ricinus communis]
            gi|223525444|gb|EEF28032.1| GTP cyclohydrolase II,
            putative [Ricinus communis]
          Length = 538

 Score =  427 bits (1097), Expect(2) = e-166
 Identities = 223/343 (65%), Positives = 258/343 (75%), Gaps = 1/343 (0%)
 Frame = +2

Query: 137  PQIAINSCFHCSIASS-QSLIIRLNRNNFLKYGCQAIDVNRVGGGDLLDEGSVLSNQNGS 313
            P I INS FH  + S+  S  I   ++ F    C A  V  +G G+L D+ S   ++NGS
Sbjct: 12   PHIFINSSFHKQLFSAPHSTGIGPYKHKFSSPTCWATGVTGIGAGNLSDDSSSKGSENGS 71

Query: 314  ILESLNESTKATFRTLNAEITQETIDFFVSDAKGDPDCPTEGFSSIEQALNTLPQGKFVI 493
            +L S +EST A F TL+AEIT ETIDFFVSDA+GDPDCPT G+SSIEQALNTL QGKFVI
Sbjct: 72   LLGSFHESTSAPFGTLDAEITPETIDFFVSDAEGDPDCPTPGYSSIEQALNTLRQGKFVI 131

Query: 494  AVDDEKEDVEGNLVMAASLIKPQTMSFMVKHGSGIVSVGMKEEDLERXXXXXXXXXXXXX 673
             VDDE  D+EGN+VMAASL  P+ ++FMVKHGSGIVSV M  +DL R             
Sbjct: 132  VVDDENGDIEGNIVMAASLTSPKQVAFMVKHGSGIVSVSMTVDDLNRLKLPLMSPESEDE 191

Query: 674  XXXXXAYTVTVDAKVGVSTGVSASDRAKTVLALSSSHSKPEDFRRPGHVFPLMYRNGGVL 853
                  +T TVDA+ G STGVSA+DRAKTV+AL+S  SKPEDFRRPGHVFPL YRNGGVL
Sbjct: 192  DSSAPTFTTTVDARTGTSTGVSAADRAKTVVALASPESKPEDFRRPGHVFPLKYRNGGVL 251

Query: 854  SRAGHTEASVDLVSLAGLPPISALSAIIDAEDGSIARLPFLRKMALEYGLPIVSITDLIR 1033
             RAGHTEAS+DL+ LAGL P+S LSAI+D +DGS+A L  L K+A EY +P+VSITD+IR
Sbjct: 252  RRAGHTEASIDLLILAGLRPVSVLSAIVDPDDGSMASLSSLTKLASEYSIPVVSITDIIR 311

Query: 1034 YRRKREKLVERIAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVK 1162
            YRRKRE LVER AVSRLPTKWGLFQAYCYRSKLDGTEHIAIVK
Sbjct: 312  YRRKRENLVERTAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVK 354



 Score =  186 bits (472), Expect(2) = e-166
 Identities = 85/104 (81%), Positives = 97/104 (93%)
 Frame = +1

Query: 1201 GSIRDGQDILVRVHSECLTGDIFGSARCDCGSQLALAVQVVEQAGRGVVLYLRGHEGRGI 1380
            G I DG+D+LVRVHSECLTGDIFGS RCDCG+QL LA+Q++EQAGRGVV+YLRGHEGRGI
Sbjct: 355  GDIGDGEDVLVRVHSECLTGDIFGSGRCDCGNQLNLAMQLIEQAGRGVVIYLRGHEGRGI 414

Query: 1381 GLGHKLMAYNLQDQGHDTVEANLELGFSADARDYGIGAQILRDI 1512
            GLGHKL AYNLQDQGHDTV+AN+ELG + DAR+YGIGAQILRD+
Sbjct: 415  GLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDV 458


>ref|XP_003547454.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like
            [Glycine max]
          Length = 533

 Score =  418 bits (1075), Expect(2) = e-163
 Identities = 219/347 (63%), Positives = 258/347 (74%), Gaps = 2/347 (0%)
 Frame = +2

Query: 128  PLAPQIAINSCFHCSIASSQSLIIRLNRNNFLKYGCQAIDVNRVGGGDLLDEGSVLSNQN 307
            PL   +  +S  H S     S  + L +N      C A  V      DL D+ ++  N+N
Sbjct: 9    PLISHVITSSSLHRSYGIHHSARLGLWKNKVWNSACCAAGVE-----DLFDDSNLKRNEN 63

Query: 308  GSILESLN--ESTKATFRTLNAEITQETIDFFVSDAKGDPDCPTEGFSSIEQALNTLPQG 481
            GS+L +LN  ES+ A+F TL+AE+T ET DFFVSDA+GDPDCP++G+SSIE+ALN L QG
Sbjct: 64   GSLLGALNNNESSSASFETLDAELTPETTDFFVSDAEGDPDCPSKGYSSIERALNALRQG 123

Query: 482  KFVIAVDDEKEDVEGNLVMAASLIKPQTMSFMVKHGSGIVSVGMKEEDLERXXXXXXXXX 661
            KFVI VDDE  D+EGNL+MAASL  P+ ++FM+KHGSGIVSVGMKEEDL+R         
Sbjct: 124  KFVIVVDDENGDIEGNLIMAASLTSPKDIAFMIKHGSGIVSVGMKEEDLQRLNLPLMSPE 183

Query: 662  XXXXXXXXXAYTVTVDAKVGVSTGVSASDRAKTVLALSSSHSKPEDFRRPGHVFPLMYRN 841
                      +T+TVD K G STGVSA+DRAKTVLALSS  SK EDFR+PGHVFPL YRN
Sbjct: 184  TEDEDSSAPTFTITVDVKSGTSTGVSAADRAKTVLALSSPESKSEDFRKPGHVFPLKYRN 243

Query: 842  GGVLSRAGHTEASVDLVSLAGLPPISALSAIIDAEDGSIARLPFLRKMALEYGLPIVSIT 1021
            GGVL RAGHTEAS+DLV+LAGLPPIS LSA++D  DGS+  L  LRK+A EY LPIVSIT
Sbjct: 244  GGVLRRAGHTEASLDLVALAGLPPISVLSALVDENDGSMQSLLNLRKLASEYTLPIVSIT 303

Query: 1022 DLIRYRRKREKLVERIAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVK 1162
            DLIRYRRKREKLVER +VSRLPTKWGLFQAYCY SKLDGTEH+A+VK
Sbjct: 304  DLIRYRRKREKLVERTSVSRLPTKWGLFQAYCYSSKLDGTEHVAVVK 350



 Score =  185 bits (469), Expect(2) = e-163
 Identities = 85/104 (81%), Positives = 98/104 (94%)
 Frame = +1

Query: 1201 GSIRDGQDILVRVHSECLTGDIFGSARCDCGSQLALAVQVVEQAGRGVVLYLRGHEGRGI 1380
            G + DGQD+LVRVHSECLTGDIFGSARCDCG+QL LA++++E+AGRGVV+YLRGHEGRGI
Sbjct: 351  GDMGDGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMRLIEEAGRGVVVYLRGHEGRGI 410

Query: 1381 GLGHKLMAYNLQDQGHDTVEANLELGFSADARDYGIGAQILRDI 1512
            GLGHKL AYNLQDQGHDTV+AN+ELG + DAR+YGIGAQILRDI
Sbjct: 411  GLGHKLKAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDI 454


>ref|XP_002299894.1| predicted protein [Populus trichocarpa] gi|222847152|gb|EEE84699.1|
            predicted protein [Populus trichocarpa]
          Length = 441

 Score =  408 bits (1048), Expect(2) = e-161
 Identities = 207/277 (74%), Positives = 230/277 (83%)
 Frame = +2

Query: 332  ESTKATFRTLNAEITQETIDFFVSDAKGDPDCPTEGFSSIEQALNTLPQGKFVIAVDDEK 511
            ES  A F TL+AEIT ETIDFFVSDA+GDPDCPTEG+SSIEQALNTL +GKFVI VDDE 
Sbjct: 1    ESASAPFLTLDAEITPETIDFFVSDAEGDPDCPTEGYSSIEQALNTLREGKFVIVVDDEN 60

Query: 512  EDVEGNLVMAASLIKPQTMSFMVKHGSGIVSVGMKEEDLERXXXXXXXXXXXXXXXXXXA 691
             D+EGNL+MAASL  PQ +SF++K+GSGIVSVGMKEEDLER                   
Sbjct: 61   GDIEGNLIMAASLTSPQHVSFLIKNGSGIVSVGMKEEDLERLKLPLMSPETENEDSSAPT 120

Query: 692  YTVTVDAKVGVSTGVSASDRAKTVLALSSSHSKPEDFRRPGHVFPLMYRNGGVLSRAGHT 871
            +T+TVDAK G  TGVSASDRAKTVLALSS  +KPEDFRRPGHVFPL YRNGGVL RAGHT
Sbjct: 121  FTITVDAKSGTCTGVSASDRAKTVLALSSPETKPEDFRRPGHVFPLKYRNGGVLRRAGHT 180

Query: 872  EASVDLVSLAGLPPISALSAIIDAEDGSIARLPFLRKMALEYGLPIVSITDLIRYRRKRE 1051
            EASVDLV LAGLPP+S LSAIID EDGSIA L  +RK+A+E+ +PIVSITDLIRYRRKRE
Sbjct: 181  EASVDLVMLAGLPPVSVLSAIIDPEDGSIASLADIRKLAMEHNIPIVSITDLIRYRRKRE 240

Query: 1052 KLVERIAVSRLPTKWGLFQAYCYRSKLDGTEHIAIVK 1162
             LVER A+SRLPTKWGLF+AYCYRSKL+GTEH+AIVK
Sbjct: 241  YLVERSAISRLPTKWGLFEAYCYRSKLEGTEHVAIVK 277



 Score =  189 bits (479), Expect(2) = e-161
 Identities = 87/104 (83%), Positives = 99/104 (95%)
 Frame = +1

Query: 1201 GSIRDGQDILVRVHSECLTGDIFGSARCDCGSQLALAVQVVEQAGRGVVLYLRGHEGRGI 1380
            G+I DGQD+LVRVHSECLTGDIFGSARCDCG+QL LA+Q++EQAGRG+V+YLRGHEGRGI
Sbjct: 278  GNIGDGQDVLVRVHSECLTGDIFGSARCDCGNQLDLAMQLIEQAGRGIVVYLRGHEGRGI 337

Query: 1381 GLGHKLMAYNLQDQGHDTVEANLELGFSADARDYGIGAQILRDI 1512
            GLGHKL AYNLQDQGHDTV+AN+ELG + DAR+YGIGAQILRDI
Sbjct: 338  GLGHKLRAYNLQDQGHDTVQANIELGLAVDAREYGIGAQILRDI 381


>ref|XP_003597321.1| Riboflavin biosynthesis protein ribBA [Medicago truncatula]
            gi|355486369|gb|AES67572.1| Riboflavin biosynthesis
            protein ribBA [Medicago truncatula]
          Length = 577

 Score =  404 bits (1039), Expect(2) = e-156
 Identities = 220/389 (56%), Positives = 265/389 (68%), Gaps = 2/389 (0%)
 Frame = +2

Query: 2    LCVTLSKSESKTT-VDKNIFQKSL*KFPELQSHIPMICLLLQRPLAPQIAINSCFHCSIA 178
            L V L K + + T + KN+   +   +      +PM       PL   +  NS  H S  
Sbjct: 9    LVVKLKKQQREVTKIQKNVVLST---YVLNLISLPMDSASFPGPLISHVITNSSLHRSCT 65

Query: 179  SSQSLIIRLNRNNFLKYGCQAIDVNRVGGGDLLDE-GSVLSNQNGSILESLNESTKATFR 355
            +  S    L  N        AI  ++VG  D+ D+ G +  N+NGS+L++LN        
Sbjct: 66   THHSARFGLWNNKVRNLAFYAIGFSKVGTEDVFDDSGDLKENENGSLLKTLNAEK----- 120

Query: 356  TLNAEITQETIDFFVSDAKGDPDCPTEGFSSIEQALNTLPQGKFVIAVDDEKEDVEGNLV 535
                EI QET DFFVS+A+GDPDCP++G+SSIE ALN L QGKFVI VDDE  +VEGNL+
Sbjct: 121  ----EIKQETDDFFVSEAEGDPDCPSKGYSSIEHALNALHQGKFVIVVDDENNNVEGNLI 176

Query: 536  MAASLIKPQTMSFMVKHGSGIVSVGMKEEDLERXXXXXXXXXXXXXXXXXXAYTVTVDAK 715
             AASLI  + ++FM+KHGSGIVSVGMKEEDL+R                   +T+TVDAK
Sbjct: 177  KAASLISTKDVAFMIKHGSGIVSVGMKEEDLQRLNLPLMSPETEEEDSSAPTFTITVDAK 236

Query: 716  VGVSTGVSASDRAKTVLALSSSHSKPEDFRRPGHVFPLMYRNGGVLSRAGHTEASVDLVS 895
             G STGVSA+DRAKT+LALSS  SK ED R+PGHVFPL YRNGGVL RAGHTEASVDLV+
Sbjct: 237  FGTSTGVSAADRAKTILALSSPESKSEDLRKPGHVFPLKYRNGGVLRRAGHTEASVDLVA 296

Query: 896  LAGLPPISALSAIIDAEDGSIARLPFLRKMALEYGLPIVSITDLIRYRRKREKLVERIAV 1075
            LAGLPP S L+A++D EDG++A LP L+ +ALEY LPIVSITDLIRYRRKREKLVER  V
Sbjct: 297  LAGLPPFSVLTALVDVEDGNMASLPNLKNLALEYNLPIVSITDLIRYRRKREKLVERTYV 356

Query: 1076 SRLPTKWGLFQAYCYRSKLDGTEHIAIVK 1162
            S LPTKWGLFQAYCY SKLDGTEH+A+VK
Sbjct: 357  SHLPTKWGLFQAYCYSSKLDGTEHVAVVK 385



 Score =  174 bits (442), Expect(2) = e-156
 Identities = 78/100 (78%), Positives = 93/100 (93%)
 Frame = +1

Query: 1201 GSIRDGQDILVRVHSECLTGDIFGSARCDCGSQLALAVQVVEQAGRGVVLYLRGHEGRGI 1380
            G+I DGQD+LVRVHSECLTGDIFGSARCDCG QL LA++++E+AGRGV++YLRGHEGRGI
Sbjct: 386  GNIGDGQDVLVRVHSECLTGDIFGSARCDCGQQLDLAMELIEEAGRGVIVYLRGHEGRGI 445

Query: 1381 GLGHKLMAYNLQDQGHDTVEANLELGFSADARDYGIGAQI 1500
            GLGHKL AYNLQDQG DTV+AN++LG + DAR+YGIGAQ+
Sbjct: 446  GLGHKLQAYNLQDQGRDTVQANIDLGLAVDAREYGIGAQV 485