BLASTX nr result

ID: Coptis25_contig00003038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003038
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26352.3| unnamed protein product [Vitis vinifera]              209   2e-52
ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vi...   209   2e-52
ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine ...   204   5e-51
dbj|BAD95358.1| hypothetical protein [Arabidopsis thaliana]           201   7e-50
dbj|BAD93976.1| hypothetical protein [Arabidopsis thaliana]           201   7e-50

>emb|CBI26352.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  209 bits (532), Expect = 2e-52
 Identities = 106/123 (86%), Positives = 116/123 (94%)
 Frame = -3

Query: 524  VAEIVDTKLGKQITRIKPSLTYIAAEEVMGLVTAQVAENCELNKVWKDILNAEGDEIYVK 345
            VAEIVD+KLGKQITRI+PSLTYIAAEEVMGLVTAQVAEN ELN+VWKDILNAEGDEIYVK
Sbjct: 717  VAEIVDSKLGKQITRIRPSLTYIAAEEVMGLVTAQVAENSELNEVWKDILNAEGDEIYVK 776

Query: 344  DICLYMKEGENPSFLEFSERANLRREVAIGYVKNNKKVINPTPKTQPLSLEMSDSLIVIS 165
            DI LYMK GENPSF E +ERA+LR+EVAIGYVKNNKKVINP PK++PLSLEM+DSLIVIS
Sbjct: 777  DIRLYMKPGENPSFSELAERAHLRQEVAIGYVKNNKKVINPIPKSEPLSLEMTDSLIVIS 836

Query: 164  EFQ 156
            E +
Sbjct: 837  ELE 839


>ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vinifera]
          Length = 729

 Score =  209 bits (532), Expect = 2e-52
 Identities = 106/123 (86%), Positives = 116/123 (94%)
 Frame = -3

Query: 524 VAEIVDTKLGKQITRIKPSLTYIAAEEVMGLVTAQVAENCELNKVWKDILNAEGDEIYVK 345
           VAEIVD+KLGKQITRI+PSLTYIAAEEVMGLVTAQVAEN ELN+VWKDILNAEGDEIYVK
Sbjct: 600 VAEIVDSKLGKQITRIRPSLTYIAAEEVMGLVTAQVAENSELNEVWKDILNAEGDEIYVK 659

Query: 344 DICLYMKEGENPSFLEFSERANLRREVAIGYVKNNKKVINPTPKTQPLSLEMSDSLIVIS 165
           DI LYMK GENPSF E +ERA+LR+EVAIGYVKNNKKVINP PK++PLSLEM+DSLIVIS
Sbjct: 660 DIRLYMKPGENPSFSELAERAHLRQEVAIGYVKNNKKVINPIPKSEPLSLEMTDSLIVIS 719

Query: 164 EFQ 156
           E +
Sbjct: 720 ELE 722


>ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine max]
          Length = 850

 Score =  204 bits (520), Expect = 5e-51
 Identities = 103/123 (83%), Positives = 113/123 (91%)
 Frame = -3

Query: 524  VAEIVDTKLGKQITRIKPSLTYIAAEEVMGLVTAQVAENCELNKVWKDILNAEGDEIYVK 345
            VAEIVD+KLGKQI+RIKPS+TYIAAEE+M LVTAQVAEN ELN+VWKD+LNAEGDEIYVK
Sbjct: 721  VAEIVDSKLGKQISRIKPSVTYIAAEEIMSLVTAQVAENSELNEVWKDVLNAEGDEIYVK 780

Query: 344  DICLYMKEGENPSFLEFSERANLRREVAIGYVKNNKKVINPTPKTQPLSLEMSDSLIVIS 165
            DI LYMKEGENPSF E SERA LRREVAIGYVKN K VINP PK++PLSLEM+DSLIVIS
Sbjct: 781  DIGLYMKEGENPSFSELSERAYLRREVAIGYVKNKKNVINPVPKSEPLSLEMTDSLIVIS 840

Query: 164  EFQ 156
            E +
Sbjct: 841  ELE 843


>dbj|BAD95358.1| hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  201 bits (510), Expect = 7e-50
 Identities = 101/122 (82%), Positives = 111/122 (90%)
 Frame = -3

Query: 521 AEIVDTKLGKQITRIKPSLTYIAAEEVMGLVTAQVAENCELNKVWKDILNAEGDEIYVKD 342
           +EIVDTKLGKQITR+KPSLT+IAAEEVM LVTAQVAEN ELN+VWKDIL+AEGDEIYVKD
Sbjct: 353 SEIVDTKLGKQITRLKPSLTFIAAEEVMSLVTAQVAENSELNEVWKDILDAEGDEIYVKD 412

Query: 341 ICLYMKEGENPSFLEFSERANLRREVAIGYVKNNKKVINPTPKTQPLSLEMSDSLIVISE 162
           I LYMKEGENPSF E SERA LRREVAIGY+K  KK+INP PKT+P+SLEM DSLIVISE
Sbjct: 413 IELYMKEGENPSFTELSERAWLRREVAIGYIKGGKKIINPVPKTEPVSLEMEDSLIVISE 472

Query: 161 FQ 156
            +
Sbjct: 473 LE 474


>dbj|BAD93976.1| hypothetical protein [Arabidopsis thaliana]
          Length = 249

 Score =  201 bits (510), Expect = 7e-50
 Identities = 101/122 (82%), Positives = 111/122 (90%)
 Frame = -3

Query: 521 AEIVDTKLGKQITRIKPSLTYIAAEEVMGLVTAQVAENCELNKVWKDILNAEGDEIYVKD 342
           +EIVDTKLGKQITR+KPSLT+IAAEEVM LVTAQVAEN ELN+VWKDIL+AEGDEIYVKD
Sbjct: 121 SEIVDTKLGKQITRLKPSLTFIAAEEVMSLVTAQVAENSELNEVWKDILDAEGDEIYVKD 180

Query: 341 ICLYMKEGENPSFLEFSERANLRREVAIGYVKNNKKVINPTPKTQPLSLEMSDSLIVISE 162
           I LYMKEGENPSF E SERA LRREVAIGY+K  KK+INP PKT+P+SLEM DSLIVISE
Sbjct: 181 IELYMKEGENPSFTELSERAWLRREVAIGYIKGGKKIINPVPKTEPVSLEMEDSLIVISE 240

Query: 161 FQ 156
            +
Sbjct: 241 LE 242


Top