BLASTX nr result

ID: Coptis25_contig00003035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003035
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|2...   152   1e-53
emb|CAE45585.1| coatomer alpha subunit-like protein [Lotus japon...   150   3e-53
ref|XP_003537852.1| PREDICTED: coatomer subunit alpha-1-like [Gl...   150   3e-53
ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|2...   150   3e-53
ref|XP_004165122.1| PREDICTED: coatomer subunit alpha-1-like [Cu...   150   3e-53

>ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|222868554|gb|EEF05685.1|
           predicted protein [Populus trichocarpa]
          Length = 1218

 Score =  152 bits (383), Expect(2) = 1e-53
 Identities = 72/83 (86%), Positives = 77/83 (92%)
 Frame = +2

Query: 119 SRVMFHAKHDIIVSNSEDKSICVWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDS 298
           S VMFHAK DIIVSNSEDKSI VWDVTKR G+QTFRREHDRFW+LA HPEMNL+AAGHDS
Sbjct: 252 SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDS 311

Query: 299 SMIVFKLERERPAFSVSGDSLYY 367
            MIVFKLERERPAF+VSGDSL+Y
Sbjct: 312 GMIVFKLERERPAFAVSGDSLFY 334



 Score = 83.2 bits (204), Expect(2) = 1e-53
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +1

Query: 1   FYPTLPLIVSGADDRQIKLWRMNDMKAWEVETLRGHTNTVSC 126
           F+PTLPLIVSGADDRQ+KLWRMND KAWEV+TLRGH N VSC
Sbjct: 212 FHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSC 253


>emb|CAE45585.1| coatomer alpha subunit-like protein [Lotus japonicus]
          Length = 1221

 Score =  150 bits (380), Expect(2) = 3e-53
 Identities = 72/83 (86%), Positives = 76/83 (91%)
 Frame = +2

Query: 119 SRVMFHAKHDIIVSNSEDKSICVWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDS 298
           S VMFHAK DIIVSNSEDKSI VWD TKR GIQTFRREHDRFW+LA HPEMNL+AAGHDS
Sbjct: 252 SCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILATHPEMNLLAAGHDS 311

Query: 299 SMIVFKLERERPAFSVSGDSLYY 367
            MIVFKLERERPAF+VSGDSL+Y
Sbjct: 312 GMIVFKLERERPAFAVSGDSLFY 334



 Score = 83.2 bits (204), Expect(2) = 3e-53
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +1

Query: 1   FYPTLPLIVSGADDRQIKLWRMNDMKAWEVETLRGHTNTVSC 126
           F+PTLPLIVSGADDRQ+KLWRMND KAWEV+TLRGH N VSC
Sbjct: 212 FHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSC 253


>ref|XP_003537852.1| PREDICTED: coatomer subunit alpha-1-like [Glycine max]
          Length = 1221

 Score =  150 bits (380), Expect(2) = 3e-53
 Identities = 72/83 (86%), Positives = 76/83 (91%)
 Frame = +2

Query: 119 SRVMFHAKHDIIVSNSEDKSICVWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDS 298
           S VMFHAK DIIVSNSEDKSI VWD TKR GIQTFRREHDRFW+LA HPEMNL+AAGHDS
Sbjct: 252 SCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILATHPEMNLLAAGHDS 311

Query: 299 SMIVFKLERERPAFSVSGDSLYY 367
            MIVFKLERERPAF+VSGDSL+Y
Sbjct: 312 GMIVFKLERERPAFAVSGDSLFY 334



 Score = 83.2 bits (204), Expect(2) = 3e-53
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +1

Query: 1   FYPTLPLIVSGADDRQIKLWRMNDMKAWEVETLRGHTNTVSC 126
           F+PTLPLIVSGADDRQ+KLWRMND KAWEV+TLRGH N VSC
Sbjct: 212 FHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSC 253


>ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|222858686|gb|EEE96233.1|
           predicted protein [Populus trichocarpa]
          Length = 1220

 Score =  150 bits (380), Expect(2) = 3e-53
 Identities = 71/83 (85%), Positives = 77/83 (92%)
 Frame = +2

Query: 119 SRVMFHAKHDIIVSNSEDKSICVWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDS 298
           S VMFHAK DIIVSNSEDKSI VWDVTKR G+QTFRREHDRFW+LA HPEMNL+AAGHDS
Sbjct: 252 SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDS 311

Query: 299 SMIVFKLERERPAFSVSGDSLYY 367
            MIVFKLERERPAF++SGDSL+Y
Sbjct: 312 GMIVFKLERERPAFALSGDSLFY 334



 Score = 83.2 bits (204), Expect(2) = 3e-53
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +1

Query: 1   FYPTLPLIVSGADDRQIKLWRMNDMKAWEVETLRGHTNTVSC 126
           F+PTLPLIVSGADDRQ+KLWRMND KAWEV+TLRGH N VSC
Sbjct: 212 FHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSC 253


>ref|XP_004165122.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus]
          Length = 1219

 Score =  150 bits (380), Expect(2) = 3e-53
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = +2

Query: 119 SRVMFHAKHDIIVSNSEDKSICVWDVTKRIGIQTFRREHDRFWVLAFHPEMNLIAAGHDS 298
           S VMFHAK DIIVSNSEDKSI +WD TKR G+QTFRREHDRFW+LA HPEMNL+AAGHDS
Sbjct: 252 SCVMFHAKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILAAHPEMNLLAAGHDS 311

Query: 299 SMIVFKLERERPAFSVSGDSLYYV 370
            MIVFKLERERPAF++SGDSL+YV
Sbjct: 312 GMIVFKLERERPAFAISGDSLFYV 335



 Score = 83.2 bits (204), Expect(2) = 3e-53
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +1

Query: 1   FYPTLPLIVSGADDRQIKLWRMNDMKAWEVETLRGHTNTVSC 126
           F+PTLPLIVSGADDRQ+KLWRMND KAWEV+TLRGH N VSC
Sbjct: 212 FHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSC 253


Top