BLASTX nr result

ID: Coptis25_contig00003033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003033
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cu...    71   1e-10
ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus co...    71   1e-10
ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_003559038.1| PREDICTED: coatomer subunit alpha-3-like [Br...    70   2e-10

>ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus]
           gi|449483541|ref|XP_004156620.1| PREDICTED: coatomer
           subunit alpha-1-like [Cucumis sativus]
          Length = 1217

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 7/49 (14%)
 Frame = -3

Query: 576 VTKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451
           VTKR G+QTFRREHDRFW+LA HPEMNL+ A       VFKLERER AF
Sbjct: 277 VTKRTGVQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAF 325


>ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus communis]
           gi|223547980|gb|EEF49472.1| coatomer alpha subunit,
           putative [Ricinus communis]
          Length = 1217

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 7/49 (14%)
 Frame = -3

Query: 576 VTKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451
           VTKR G+QTFRREHDRFW+LA HPEMNL+ A       VFKLERER AF
Sbjct: 277 VTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAF 325


>ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|222868554|gb|EEF05685.1|
           predicted protein [Populus trichocarpa]
          Length = 1218

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 7/49 (14%)
 Frame = -3

Query: 576 VTKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451
           VTKR G+QTFRREHDRFW+LA HPEMNL+ A       VFKLERER AF
Sbjct: 277 VTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAF 325


>ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|222858686|gb|EEE96233.1|
           predicted protein [Populus trichocarpa]
          Length = 1220

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 7/49 (14%)
 Frame = -3

Query: 576 VTKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451
           VTKR G+QTFRREHDRFW+LA HPEMNL+ A       VFKLERER AF
Sbjct: 277 VTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAF 325


>ref|XP_003559038.1| PREDICTED: coatomer subunit alpha-3-like [Brachypodium distachyon]
          Length = 1218

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/48 (75%), Positives = 37/48 (77%), Gaps = 7/48 (14%)
 Frame = -3

Query: 573 TKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451
           TKR GIQTFRREHDRFWVLA HPEMNL+ A       VFKLERER AF
Sbjct: 278 TKRTGIQTFRREHDRFWVLAAHPEMNLLAAGHDSGMIVFKLERERPAF 325


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