BLASTX nr result
ID: Coptis25_contig00003033
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003033 (578 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cu... 71 1e-10 ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus co... 71 1e-10 ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-10 ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-10 ref|XP_003559038.1| PREDICTED: coatomer subunit alpha-3-like [Br... 70 2e-10 >ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus] gi|449483541|ref|XP_004156620.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus] Length = 1217 Score = 71.2 bits (173), Expect = 1e-10 Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 7/49 (14%) Frame = -3 Query: 576 VTKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451 VTKR G+QTFRREHDRFW+LA HPEMNL+ A VFKLERER AF Sbjct: 277 VTKRTGVQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAF 325 >ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus communis] gi|223547980|gb|EEF49472.1| coatomer alpha subunit, putative [Ricinus communis] Length = 1217 Score = 71.2 bits (173), Expect = 1e-10 Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 7/49 (14%) Frame = -3 Query: 576 VTKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451 VTKR G+QTFRREHDRFW+LA HPEMNL+ A VFKLERER AF Sbjct: 277 VTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAF 325 >ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|222868554|gb|EEF05685.1| predicted protein [Populus trichocarpa] Length = 1218 Score = 71.2 bits (173), Expect = 1e-10 Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 7/49 (14%) Frame = -3 Query: 576 VTKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451 VTKR G+QTFRREHDRFW+LA HPEMNL+ A VFKLERER AF Sbjct: 277 VTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAF 325 >ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|222858686|gb|EEE96233.1| predicted protein [Populus trichocarpa] Length = 1220 Score = 71.2 bits (173), Expect = 1e-10 Identities = 35/49 (71%), Positives = 38/49 (77%), Gaps = 7/49 (14%) Frame = -3 Query: 576 VTKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451 VTKR G+QTFRREHDRFW+LA HPEMNL+ A VFKLERER AF Sbjct: 277 VTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAF 325 >ref|XP_003559038.1| PREDICTED: coatomer subunit alpha-3-like [Brachypodium distachyon] Length = 1218 Score = 70.5 bits (171), Expect = 2e-10 Identities = 36/48 (75%), Positives = 37/48 (77%), Gaps = 7/48 (14%) Frame = -3 Query: 573 TKRIGIQTFRREHDRFWVLAFHPEMNLIVA-------VFKLERERNAF 451 TKR GIQTFRREHDRFWVLA HPEMNL+ A VFKLERER AF Sbjct: 278 TKRTGIQTFRREHDRFWVLAAHPEMNLLAAGHDSGMIVFKLERERPAF 325