BLASTX nr result

ID: Coptis25_contig00003024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003024
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278601.2| PREDICTED: ubiquitin-conjugating enzyme E2 2...   307   4e-81
ref|XP_003553369.1| PREDICTED: ubiquitin-conjugating enzyme E2 2...   307   4e-81
emb|CBI32855.3| unnamed protein product [Vitis vinifera]              307   4e-81
gb|ACU23391.1| unknown [Glycine max]                                  303   8e-80
gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]     301   2e-79

>ref|XP_002278601.2| PREDICTED: ubiquitin-conjugating enzyme E2 22-like [Vitis vinifera]
          Length = 259

 Score =  307 bits (786), Expect = 4e-81
 Identities = 153/189 (80%), Positives = 161/189 (85%), Gaps = 5/189 (2%)
 Frame = +1

Query: 238 MATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNEDDLSTIFADIEGPAGTPYENGTFR 417
           MATNENLPPNVIKQLAKELKNLDE PPEG+KVVVN+DD STIFAD+EGPAGTPYENG FR
Sbjct: 1   MATNENLPPNVIKQLAKELKNLDETPPEGIKVVVNDDDFSTIFADVEGPAGTPYENGVFR 60

Query: 418 MKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVNTLKRDWNPSXXXXXXXXXXXXXXI 597
           MKL LS DFP+SPPKGYFLT+IFHPNIATNGEICVNTLK+DWNPS              I
Sbjct: 61  MKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLI 120

Query: 598 EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKSKPKFKTGAISES-TALNIDSTK 774
           EPFPESALNEQAGKMLLENYEEYARHAR+YTGIHALK KPKFKTGAISES TALN+D T 
Sbjct: 121 EPFPESALNEQAGKMLLENYEEYARHARIYTGIHALKPKPKFKTGAISESTTALNVDQTN 180

Query: 775 ----NVSQK 789
               NV QK
Sbjct: 181 SSVLNVEQK 189


>ref|XP_003553369.1| PREDICTED: ubiquitin-conjugating enzyme E2 22-like [Glycine max]
          Length = 384

 Score =  307 bits (786), Expect = 4e-81
 Identities = 160/216 (74%), Positives = 175/216 (81%), Gaps = 1/216 (0%)
 Frame = +1

Query: 166 KSPFLLSAIGLSFVFLV*RTRTFYMATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNE 345
           + PFL SA  ++  F++       MATNENLPPNVIKQLAKELKNLDE PPEG+KVVVN+
Sbjct: 109 EGPFLFSAKQIAGAFVL-------MATNENLPPNVIKQLAKELKNLDESPPEGIKVVVND 161

Query: 346 DDLSTIFADIEGPAGTPYENGTFRMKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVN 525
           DD STIFADIEGPAGTPYENG FRMKL LS DFP+SPPKG+FLT+IFHPNIATNGEICVN
Sbjct: 162 DDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGFFLTKIFHPNIATNGEICVN 221

Query: 526 TLKRDWNPSXXXXXXXXXXXXXXIEPFPESALNEQAGKMLLENYEEYARHARLYTGIHAL 705
           TLK+DWNPS              IEPFPESALNEQAGKMLLENYEEYARHARLYTGIHA 
Sbjct: 222 TLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARLYTGIHA- 280

Query: 706 KSKPKFKTGAISES-TALNIDSTKNVSQKAGDTKTS 810
           K KPKFK+GAISES TALN+D T N S  +GD KT+
Sbjct: 281 KPKPKFKSGAISESTTALNVDQT-NTSVISGDIKTT 315


>emb|CBI32855.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  307 bits (786), Expect = 4e-81
 Identities = 153/189 (80%), Positives = 161/189 (85%), Gaps = 5/189 (2%)
 Frame = +1

Query: 238 MATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNEDDLSTIFADIEGPAGTPYENGTFR 417
           MATNENLPPNVIKQLAKELKNLDE PPEG+KVVVN+DD STIFAD+EGPAGTPYENG FR
Sbjct: 53  MATNENLPPNVIKQLAKELKNLDETPPEGIKVVVNDDDFSTIFADVEGPAGTPYENGVFR 112

Query: 418 MKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVNTLKRDWNPSXXXXXXXXXXXXXXI 597
           MKL LS DFP+SPPKGYFLT+IFHPNIATNGEICVNTLK+DWNPS              I
Sbjct: 113 MKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLI 172

Query: 598 EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKSKPKFKTGAISES-TALNIDSTK 774
           EPFPESALNEQAGKMLLENYEEYARHAR+YTGIHALK KPKFKTGAISES TALN+D T 
Sbjct: 173 EPFPESALNEQAGKMLLENYEEYARHARIYTGIHALKPKPKFKTGAISESTTALNVDQTN 232

Query: 775 ----NVSQK 789
               NV QK
Sbjct: 233 SSVLNVEQK 241


>gb|ACU23391.1| unknown [Glycine max]
          Length = 218

 Score =  303 bits (775), Expect = 8e-80
 Identities = 154/192 (80%), Positives = 164/192 (85%), Gaps = 1/192 (0%)
 Frame = +1

Query: 238 MATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNEDDLSTIFADIEGPAGTPYENGTFR 417
           MATNENLPPNVIKQLAKELKNLDE PPEG+KVVVN+DD STIFADIEGPAGTPYENG FR
Sbjct: 1   MATNENLPPNVIKQLAKELKNLDESPPEGIKVVVNDDDFSTIFADIEGPAGTPYENGVFR 60

Query: 418 MKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVNTLKRDWNPSXXXXXXXXXXXXXXI 597
           MKL LS DFP+SPPKG+FLT+IFHPNIATNGEICVNTLK+DWNPS              I
Sbjct: 61  MKLLLSHDFPHSPPKGFFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLI 120

Query: 598 EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKSKPKFKTGAISES-TALNIDSTK 774
           EPFPESALNEQAGKMLLENYEEYARHARLYTGIHA K KPKFK+GAISES TALN+D T 
Sbjct: 121 EPFPESALNEQAGKMLLENYEEYARHARLYTGIHA-KPKPKFKSGAISESTTALNVDQT- 178

Query: 775 NVSQKAGDTKTS 810
           N S  +GD KT+
Sbjct: 179 NTSVISGDIKTT 190


>gb|AFV96171.1| ubiquitin conjugating enzyme S [Camellia oleifera]
          Length = 270

 Score =  301 bits (772), Expect = 2e-79
 Identities = 150/195 (76%), Positives = 160/195 (82%), Gaps = 1/195 (0%)
 Frame = +1

Query: 238 MATNENLPPNVIKQLAKELKNLDEIPPEGVKVVVNEDDLSTIFADIEGPAGTPYENGTFR 417
           MATNENLPPNVIKQLAKELKNLDE PPEG+KV VN+DD S I+ADIEGPAGTPYENG FR
Sbjct: 1   MATNENLPPNVIKQLAKELKNLDETPPEGIKVGVNDDDFSIIYADIEGPAGTPYENGVFR 60

Query: 418 MKLALSKDFPNSPPKGYFLTRIFHPNIATNGEICVNTLKRDWNPSXXXXXXXXXXXXXXI 597
           MKL LS DFP+SPPKGYFLT+IFHPNIATNGEICVNTLK+DWNPS              I
Sbjct: 61  MKLILSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLI 120

Query: 598 EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKSKPKFKTGAISES-TALNIDSTK 774
           EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALK KPKFK+GAISES TALN+D + 
Sbjct: 121 EPFPESALNEQAGKMLLENYEEYARHARLYTGIHALKQKPKFKSGAISESTTALNVDQSN 180

Query: 775 NVSQKAGDTKTSSNA 819
                  + K SS A
Sbjct: 181 TSVLNVDEKKASSGA 195


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