BLASTX nr result
ID: Coptis25_contig00003013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003013
(1027 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37575.3| unnamed protein product [Vitis vinifera] 161 3e-37
ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinif... 161 3e-37
ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|2... 159 1e-36
ref|XP_002517217.1| brushy protein, putative [Ricinus communis] ... 143 6e-32
ref|XP_004165445.1| PREDICTED: LOW QUALITY PROTEIN: protein TONS... 128 3e-27
>emb|CBI37575.3| unnamed protein product [Vitis vinifera]
Length = 1342
Score = 161 bits (407), Expect = 3e-37
Identities = 95/208 (45%), Positives = 123/208 (59%)
Frame = +2
Query: 14 LVANPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDKESISLSDATQ 193
L+ NPHC L+VLVLN C GLAGV ++IQ+L+ NDSLEEL++A N D+D+ S ++
Sbjct: 1130 LLMNPHCCLKVLVLNNCQLGLAGVLQIIQALSENDSLEELNVAGNADLDRHCTSQNNLKA 1189
Query: 194 ELHSKCIQPNLNFCDTNPKHNLSKDVDDVQEDLCAVNSDGNNLEVADSEDGLVRGEPXXX 373
S+ LN ++PK + K+V QE C +N+D N LEVADSED + EP
Sbjct: 1190 LESSETFPQILNISVSSPKVCVLKEVAAAQEGSCIMNTDYNQLEVADSEDDPITAEP-AA 1248
Query: 374 XXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*LKLLDLSSNGFTRDIIETFYTAWSSS 553
E++ IQ LSTAIGM K L+LLDLS+NGF+ ET YTAWS
Sbjct: 1249 SYDDSCTNSCKRMLQFSESEFIQGLSTAIGMAKKLQLLDLSNNGFSTQDTETIYTAWSLG 1308
Query: 554 WRYGGSTQRDVQEQVVHYSVDDKNCCGV 637
R G QR ++EQ VH V + CCGV
Sbjct: 1309 SR-SGLAQRHIKEQTVHLLVRGQKCCGV 1335
>ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinifera]
Length = 1309
Score = 161 bits (407), Expect = 3e-37
Identities = 95/208 (45%), Positives = 123/208 (59%)
Frame = +2
Query: 14 LVANPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDKESISLSDATQ 193
L+ NPHC L+VLVLN C GLAGV ++IQ+L+ NDSLEEL++A N D+D+ S ++
Sbjct: 1097 LLMNPHCCLKVLVLNNCQLGLAGVLQIIQALSENDSLEELNVAGNADLDRHCTSQNNLKA 1156
Query: 194 ELHSKCIQPNLNFCDTNPKHNLSKDVDDVQEDLCAVNSDGNNLEVADSEDGLVRGEPXXX 373
S+ LN ++PK + K+V QE C +N+D N LEVADSED + EP
Sbjct: 1157 LESSETFPQILNISVSSPKVCVLKEVAAAQEGSCIMNTDYNQLEVADSEDDPITAEP-AA 1215
Query: 374 XXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*LKLLDLSSNGFTRDIIETFYTAWSSS 553
E++ IQ LSTAIGM K L+LLDLS+NGF+ ET YTAWS
Sbjct: 1216 SYDDSCTNSCKRMLQFSESEFIQGLSTAIGMAKKLQLLDLSNNGFSTQDTETIYTAWSLG 1275
Query: 554 WRYGGSTQRDVQEQVVHYSVDDKNCCGV 637
R G QR ++EQ VH V + CCGV
Sbjct: 1276 SR-SGLAQRHIKEQTVHLLVRGQKCCGV 1302
>ref|XP_002309890.1| predicted protein [Populus trichocarpa] gi|222852793|gb|EEE90340.1|
predicted protein [Populus trichocarpa]
Length = 1353
Score = 159 bits (401), Expect = 1e-36
Identities = 86/206 (41%), Positives = 126/206 (61%)
Frame = +2
Query: 14 LVANPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDKESISLSDATQ 193
L+ NP C L+VLVLNKC GL G+ +MIQ+LA ND LEELHLA+N +++K + D+T+
Sbjct: 1142 LLTNPQCCLKVLVLNKCQLGLTGILQMIQALAENDCLEELHLADNANLEKTYMIQYDSTK 1201
Query: 194 ELHSKCIQPNLNFCDTNPKHNLSKDVDDVQEDLCAVNSDGNNLEVADSEDGLVRGEPXXX 373
S +QPNLN +++ K ++ K+ D ++ +C +N++ N LEVADSEDG +R E
Sbjct: 1202 GSCSDILQPNLNKSESS-KMSVPKESDSDKQGVCVMNTECNQLEVADSEDGPIRAEAAPS 1260
Query: 374 XXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*LKLLDLSSNGFTRDIIETFYTAWSSS 553
E + IQEL+TAI M K L+ ++L +NGFT + E YTAWSS
Sbjct: 1261 DFDDSCTSSCQKNSL-LECQFIQELTTAISMAKQLQFMELGNNGFTTQVAEALYTAWSSR 1319
Query: 554 WRYGGSTQRDVQEQVVHYSVDDKNCC 631
G R +++Q +H+S++ CC
Sbjct: 1320 LE-NGLAWRHIEDQTIHFSMETNKCC 1344
>ref|XP_002517217.1| brushy protein, putative [Ricinus communis]
gi|223543588|gb|EEF45117.1| brushy protein, putative
[Ricinus communis]
Length = 1327
Score = 143 bits (361), Expect = 6e-32
Identities = 88/224 (39%), Positives = 124/224 (55%), Gaps = 15/224 (6%)
Frame = +2
Query: 5 VNGLVANPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDKESISLSD 184
+ L+ NP C L+VLVLNKC GL GV ++I++L+ N LEELH+A+N D++ + D
Sbjct: 1098 ITSLLVNPRCCLKVLVLNKCQLGLTGVLQVIKTLSENHHLEELHVADNSSQDEKHMMRYD 1157
Query: 185 ATQELHSKCIQPNLNFCDTNPKHNLSKDVD--------------DV-QEDLCAVNSDGNN 319
+T + +QPN + +++ K K D D+ E LCAVN+D N
Sbjct: 1158 STTRCSADLLQPNFSTSESSLKVCGPKKADTENEALKVCAPEKADINHEALCAVNTDCNQ 1217
Query: 320 LEVADSEDGLVRGEPXXXXXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*LKLLDLSS 499
LEVADSED +R E E + IQELS AI M K LKLLDLS+
Sbjct: 1218 LEVADSEDNEIRVEAGPEFDDSCTSSSQKNSSL--ECQFIQELSAAISMAKQLKLLDLSN 1275
Query: 500 NGFTRDIIETFYTAWSSSWRYGGSTQRDVQEQVVHYSVDDKNCC 631
NGF+ + ET AWSS + S R +++Q++H+S+ D+ CC
Sbjct: 1276 NGFSNPVAETLSNAWSSRFTTDVS-WRHIKDQIIHFSMSDEMCC 1318
>ref|XP_004165445.1| PREDICTED: LOW QUALITY PROTEIN: protein TONSOKU-like [Cucumis
sativus]
Length = 1342
Score = 128 bits (321), Expect = 3e-27
Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 4/213 (1%)
Frame = +2
Query: 5 VNGLVANPHCYLRVLVLNKCCFGLAGVTKMIQSLAGNDSLEELHLAENVDMDKESISLSD 184
V+ L+ANP C ++ L+LNKC GL GV ++IQ++AGN LEEL+LA+N+D+DK + +
Sbjct: 1131 VSSLIANPLCGIKFLLLNKCQLGLTGVAQIIQAIAGNHCLEELNLADNIDLDKHPLQCNI 1190
Query: 185 ATQELHSKCIQPNLNFC-DTNPKHNL---SKDVDDVQEDLCAVNSDGNNLEVADSEDGLV 352
+E + + +QP C D + H L SK+ D Q++L N++ + LEVADSE+ +
Sbjct: 1191 IDKE-NKELVQP----CHDISKPHGLTCSSKEFDLAQQNLEETNTEYDQLEVADSEEP-I 1244
Query: 353 RGEPXXXXXXXXXXXXXXXXXXHPENKLIQELSTAIGMEK*LKLLDLSSNGFTRDIIETF 532
R P + + I LSTAIGM K L+LLDLS+NGF+ ET
Sbjct: 1245 REAPASGIDDSCASSCERKSTSF-DCQFILSLSTAIGMAKTLRLLDLSNNGFSSQETETI 1303
Query: 533 YTAWSSSWRYGGSTQRDVQEQVVHYSVDDKNCC 631
+ AWS+S QR +++ +VH V CC
Sbjct: 1304 FGAWSTS--RTDLAQRHIKDNIVHLYVKGTKCC 1334