BLASTX nr result
ID: Coptis25_contig00003002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003002
(2112 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16416.3| unnamed protein product [Vitis vinifera] 258 2e-75
emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera] 233 3e-75
ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like... 263 1e-71
emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera] 263 1e-71
ref|XP_002314023.1| predicted protein [Populus trichocarpa] gi|2... 228 4e-70
>emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 258 bits (659), Expect(2) = 2e-75
Identities = 143/245 (58%), Positives = 169/245 (68%), Gaps = 8/245 (3%)
Frame = +1
Query: 958 NINVENGYAVMRGIGNFRVGNNGNGEAS-PSTSRLKNQINFXXXXXXXXXLMXXXXXXXX 1134
++NVENGYA+MRG+GNF G+ NGE S S SRLK QINF L+
Sbjct: 53 HLNVENGYAIMRGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGN 112
Query: 1135 XXXXXXXAECGSLASGNVSSH-YTPNYSVGSWDDSTL--ENFPNVKRVRDVNPNMLSGLK 1305
+ GS G+ +S + + +GSWDDS + E+F ++K VRD SGL
Sbjct: 113 KSMGTGSPDNGSFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLN 172
Query: 1306 SSEDQLPEAGNQTRNLTHHFSLP-KTSAEMAAI---LQFQDSVPCKIRAKRGCATHPRSI 1473
+SE Q E N+ L HH SLP KTSA++ I LQFQDSVPCKIRAKRGCATHPRSI
Sbjct: 173 ASEAQKGEPANRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSI 232
Query: 1474 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEVKKLNDNRANCTCS 1653
AERVRRTRISERMRKLQELVPNMDKQTNT+DMLDLAV+YIK+LQK+VK L+DNRA CTCS
Sbjct: 233 AERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKTLSDNRAKCTCS 292
Query: 1654 SKQNP 1668
+KQ P
Sbjct: 293 NKQKP 297
Score = 53.1 bits (126), Expect(2) = 2e-75
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +3
Query: 729 MSNHGS---NVAESVYRVASSVGLDQQASPVKMGSGNSSNLVRHSSSPAGLF 875
M +H S E+ Y SS+G+DQ + +K+G GN+SNL+RHSSSPAGLF
Sbjct: 1 MPHHNSAAPGTVENSYSAVSSMGMDQ-SQQIKIGGGNNSNLIRHSSSPAGLF 51
>emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 233 bits (594), Expect(2) = 3e-75
Identities = 134/239 (56%), Positives = 160/239 (66%), Gaps = 8/239 (3%)
Frame = +1
Query: 958 NINVENGYAVMRGIGNFRVGNNGNGEAS-PSTSRLKNQINFXXXXXXXXXLMXXXXXXXX 1134
++NVENGYA+MRG+GNF G+ NGE S S SRLK QINF L+
Sbjct: 196 HLNVENGYAIMRGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGN 255
Query: 1135 XXXXXXXAECGSLASGNVSSH-YTPNYSVGSWDDSTL--ENFPNVKRVRDVNPNMLSGLK 1305
+ GS G+ +S + + +GSWDDS + E+F ++K VRD SGL
Sbjct: 256 KSMGTGSPDNGSFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLN 315
Query: 1306 SSEDQLPEAGNQTRNLTHHFSLP-KTSAEMAAI---LQFQDSVPCKIRAKRGCATHPRSI 1473
+SE Q E N+ L HH SLP KTSA++ I LQFQDSVPCKIRAKRGCATHPRSI
Sbjct: 316 ASEAQKGEPANRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSI 375
Query: 1474 AERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEVKKLNDNRANCTC 1650
AERVRRTRISERMRKLQELVPNMDKQTNT+DMLDLAV+YIK+LQK+VK+ N +A C
Sbjct: 376 AERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKR-NRKKAAIKC 433
Score = 77.8 bits (190), Expect(2) = 3e-75
Identities = 60/175 (34%), Positives = 84/175 (48%), Gaps = 43/175 (24%)
Frame = +3
Query: 480 YRSAPSSMLANFM--EDDEFLVSHH------------RSSSPEAESMFARFMNCDSSPTE 617
YRSAPSS +NF+ ED E + H R SSPE E +F+RFM +
Sbjct: 22 YRSAPSSYFSNFIDGEDCEEFLQHRPSSPETERIFSSRPSSPETERIFSRFMASGGTEDS 81
Query: 618 KS----------------TIIKAEVSNR---SSNHYMGVIDEEETE-------QIMYHTP 719
S +++ N+ S H V+ +++ + Q+MY T
Sbjct: 82 SSHTVMNMRQNSQAMAPESVVVVSQQNQFMASMKHGAEVLQQQQQQNGYASGSQMMYQTS 141
Query: 720 PQPMSNHGS---NVAESVYRVASSVGLDQQASPVKMGSGNSSNLVRHSSSPAGLF 875
PM +H S E+ Y SS+G+DQ + K+G GN+SNL+RHSSSPAGLF
Sbjct: 142 -SPMPHHNSAAPGTVENSYSAVSSMGMDQ-SQQXKIGGGNNSNLIRHSSSPAGLF 194
>ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 263 bits (671), Expect(2) = 1e-71
Identities = 141/242 (58%), Positives = 170/242 (70%), Gaps = 5/242 (2%)
Frame = +1
Query: 958 NINVENGYAVMRGIGNFRVGNNGNGEASPSTSRLKNQINFXXXXXXXXXLMXXXXXXXXX 1137
+++ +NGYA+MRG+GNFR GN GNGE SPSTSRLK Q++F L+
Sbjct: 158 HLSGQNGYAIMRGVGNFRPGNVGNGEISPSTSRLKPQVSFSSGLPSSLGLLPQISEIGSE 217
Query: 1138 XXXXXXAECGSLASGNVSSH-YTPNYSVGSWDDST-LENFPNVKRVRDVNPNMLSGLKSS 1311
LA+ N + Y+P + GSW+DS ENF +KR +D + + SG +S
Sbjct: 218 CIQASSPNDRKLANSNGDARFYSPGFPYGSWNDSAHFENFSGMKRDQDNDGKLYSGSNTS 277
Query: 1312 EDQLPEAGNQTRNLTHHFSLPKTSAEMAAI---LQFQDSVPCKIRAKRGCATHPRSIAER 1482
+ E G++++ L+HH SLPKTSAEMAA+ LQFQDSVPCKIRAKRGCATHPRSIAER
Sbjct: 278 GIRNEEFGHRSQILSHHLSLPKTSAEMAAMEKFLQFQDSVPCKIRAKRGCATHPRSIAER 337
Query: 1483 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEVKKLNDNRANCTCSSKQ 1662
VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIK+LQK+ L DNRA+C C KQ
Sbjct: 338 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYNTLTDNRAHCKCLGKQ 397
Query: 1663 NP 1668
P
Sbjct: 398 KP 399
Score = 35.8 bits (81), Expect(2) = 1e-71
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)
Frame = +3
Query: 480 YRSAPSSMLANFMEDDEFLVSHHRSSSPEAESMFARFMNCDSSPTEKSTIIKAEVSNRSS 659
+RSAPSS+LANF + + + H+ ++ + RFM C
Sbjct: 59 FRSAPSSLLANFTDSGDGV---HKGANLCDDFESERFMPCGGF----------------- 98
Query: 660 NHYMGVIDEEETEQIMYHTPPQ---PMSNHGSNVAESVYRVASSVGLDQQASPVKMGSGN 830
++ PPQ S+ S+ + Y V +S ++ +
Sbjct: 99 --------QDSAMSCQSQLPPQYPRQSSSTSSSAMDGSYGVVNSNNMEAK---------Q 141
Query: 831 SSNLVRHSSSPAGLF 875
S+LVR SSSPAGLF
Sbjct: 142 GSSLVRQSSSPAGLF 156
>emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 263 bits (671), Expect(2) = 1e-71
Identities = 141/242 (58%), Positives = 170/242 (70%), Gaps = 5/242 (2%)
Frame = +1
Query: 958 NINVENGYAVMRGIGNFRVGNNGNGEASPSTSRLKNQINFXXXXXXXXXLMXXXXXXXXX 1137
+++ +NGYA+MRG+GNFR GN GNGE SPSTSRLK Q++F L+
Sbjct: 147 HLSGQNGYAIMRGVGNFRPGNVGNGEISPSTSRLKPQVSFSSGLPSSLGLLPQISEIGSE 206
Query: 1138 XXXXXXAECGSLASGNVSSH-YTPNYSVGSWDDST-LENFPNVKRVRDVNPNMLSGLKSS 1311
LA+ N + Y+P + GSW+DS ENF +KR +D + + SG +S
Sbjct: 207 CIQASSPNDRKLANSNGDARFYSPGFPYGSWNDSAHFENFSGMKRDQDNDGKLYSGSNTS 266
Query: 1312 EDQLPEAGNQTRNLTHHFSLPKTSAEMAAI---LQFQDSVPCKIRAKRGCATHPRSIAER 1482
+ E G++++ L+HH SLPKTSAEMAA+ LQFQDSVPCKIRAKRGCATHPRSIAER
Sbjct: 267 GIRNEEFGHRSQILSHHLSLPKTSAEMAAMEKFLQFQDSVPCKIRAKRGCATHPRSIAER 326
Query: 1483 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEVKKLNDNRANCTCSSKQ 1662
VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIK+LQK+ L DNRA+C C KQ
Sbjct: 327 VRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYNTLTDNRAHCKCLGKQ 386
Query: 1663 NP 1668
P
Sbjct: 387 KP 388
Score = 35.8 bits (81), Expect(2) = 1e-71
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)
Frame = +3
Query: 480 YRSAPSSMLANFMEDDEFLVSHHRSSSPEAESMFARFMNCDSSPTEKSTIIKAEVSNRSS 659
+RSAPSS+LANF + + + H+ ++ + RFM C
Sbjct: 48 FRSAPSSLLANFTDSGDGV---HKGANLCDDFESERFMPCGGF----------------- 87
Query: 660 NHYMGVIDEEETEQIMYHTPPQ---PMSNHGSNVAESVYRVASSVGLDQQASPVKMGSGN 830
++ PPQ S+ S+ + Y V +S ++ +
Sbjct: 88 --------QDSAMSCQSQLPPQYPRQSSSTSSSAMDGSYGVVNSNNMEAK---------Q 130
Query: 831 SSNLVRHSSSPAGLF 875
S+LVR SSSPAGLF
Sbjct: 131 GSSLVRQSSSPAGLF 145
>ref|XP_002314023.1| predicted protein [Populus trichocarpa] gi|222850431|gb|EEE87978.1|
predicted protein [Populus trichocarpa]
Length = 421
Score = 228 bits (581), Expect(2) = 4e-70
Identities = 132/248 (53%), Positives = 161/248 (64%), Gaps = 7/248 (2%)
Frame = +1
Query: 958 NINVENGYAVMRGIGNFRVGNNGNGEASPSTSRLKNQINFXXXXXXXXXLMXXXXXXXXX 1137
++ V+NG+ VMR G+FR GN NGEASP T++L+ +NF +
Sbjct: 188 DLGVDNGFVVMREGGSFRAGNGTNGEASP-TNKLRRHVNFSSGQRMLPQIAEIGE----- 241
Query: 1138 XXXXXXAEC--GSLASGNVS-SHYTPNYSVGSWDDSTLENFPNVKRVRDVNPNMLSGLKS 1308
EC G G+VS + Y ++ SWD ++L +KR RD + NM SGL +
Sbjct: 242 -------ECIGGRSPEGDVSEARYMSRFTSDSWDGASLSG---LKRQRDNDGNMFSGLNT 291
Query: 1309 SEDQLPEAGNQTRNLTHHFSLPKTSAEMAAILQFQD----SVPCKIRAKRGCATHPRSIA 1476
++Q +GN+ LTHH SLPKT +E A I +F D SVPCKIRAKRG ATHPRSIA
Sbjct: 292 LDNQDGNSGNRVTGLTHHLSLPKTLSETATIEKFLDFQGNSVPCKIRAKRGFATHPRSIA 351
Query: 1477 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEVKKLNDNRANCTCSS 1656
ERVRRTRISERMRKLQEL PNMDKQTNTADMLDLAVE+IK+LQK+VK L D +A CTCSS
Sbjct: 352 ERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQVKTLTDTKAKCTCSS 411
Query: 1657 KQNPY*IP 1680
KQ Y P
Sbjct: 412 KQKHYSSP 419
Score = 65.5 bits (158), Expect(2) = 4e-70
Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Frame = +3
Query: 480 YRSAPSSMLANFME-----DDEFLVS----HHRSSSPEAESMFARFMNCDSSPTEKSTII 632
YRSAPSS+L + + D + S + RSSSPE ++M ARFM+ + + S+
Sbjct: 46 YRSAPSSILESLVNGTSGHDGGGIESGDYRYLRSSSPEMDTMLARFMSSCNGSGDSSSQN 105
Query: 633 KAEVSNRSSNHYMGVIDEEETEQIMYHTPPQPMSNHGSNVAESVYRVASSVGLDQQASPV 812
E R + G E + + H S N +S + V SS+ L+
Sbjct: 106 LQEFGERPAIKQEGGDSEMVYQSLPGHNLVTDNSVSVGNSMDSAFNVMSSMALENSMQAT 165
Query: 813 KMGSGNSSNLVRHSSSPAGLF 875
KM + N SNL R +SSPAGLF
Sbjct: 166 KMSTANGSNLARQNSSPAGLF 186