BLASTX nr result
ID: Coptis25_contig00002993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002993
(478 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22268.1| unknown [Picea sitchensis] gi|116783111|gb|ABK227... 62 7e-13
ref|NP_001130960.1| uncharacterized protein LOC100192065 [Zea ma... 60 1e-12
ref|XP_002886357.1| F22C12.4 [Arabidopsis lyrata subsp. lyrata] ... 60 1e-12
ref|XP_002872553.1| hypothetical protein ARALYDRAFT_489953 [Arab... 60 1e-12
ref|NP_192853.1| V-type proton ATPase subunit E1 [Arabidopsis th... 60 1e-12
>gb|ABK22268.1| unknown [Picea sitchensis] gi|116783111|gb|ABK22797.1| unknown
[Picea sitchensis] gi|116786762|gb|ABK24227.1| unknown
[Picea sitchensis] gi|224285131|gb|ACN40293.1| unknown
[Picea sitchensis] gi|224285269|gb|ACN40360.1| unknown
[Picea sitchensis]
Length = 229
Score = 62.4 bits (150), Expect(3) = 7e-13
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +1
Query: 4 EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQD 117
EYSMQLNASRI+VLQAQDDL+ S+KESA KE+L +SQD
Sbjct: 69 EYSMQLNASRIKVLQAQDDLVASMKESAGKEILAISQD 106
Score = 31.6 bits (70), Expect(3) = 7e-13
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +2
Query: 161 KAKVHSPEILVDKQTFLPSD 220
KA VH+P+I++D+QT+LP +
Sbjct: 156 KANVHAPQIILDEQTYLPPE 175
Score = 23.9 bits (50), Expect(3) = 7e-13
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3
Query: 126 YKKLLKDLIVQ 158
YK+LLKDLIVQ
Sbjct: 110 YKRLLKDLIVQ 120
>ref|NP_001130960.1| uncharacterized protein LOC100192065 [Zea mays]
gi|194690560|gb|ACF79364.1| unknown [Zea mays]
gi|195628324|gb|ACG35992.1| vacuolar ATP synthase
subunit E [Zea mays] gi|414875669|tpg|DAA52800.1| TPA:
Vacuolar ATP synthase subunit E [Zea mays]
Length = 230
Score = 60.5 bits (145), Expect(3) = 1e-12
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +1
Query: 4 EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQDKLSTKSF*K 144
+YSMQLNASRI+VLQAQDDL+ + ESA KELLC+S+D + K K
Sbjct: 69 DYSMQLNASRIKVLQAQDDLVTDMLESARKELLCISRDHPTYKKLLK 115
Score = 34.7 bits (78), Expect(3) = 1e-12
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 143 RSHCSAKAKVHSPEILVDKQTFLPSDLTSQATQGP 247
R+ + KAKV+ PEI+VD+Q +LPS + GP
Sbjct: 150 RNEYADKAKVYPPEIVVDRQIYLPSAPSHYQAPGP 184
Score = 22.3 bits (46), Expect(3) = 1e-12
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 126 YKKLLKDLIVQ 158
YKKLLK LIVQ
Sbjct: 110 YKKLLKTLIVQ 120
>ref|XP_002886357.1| F22C12.4 [Arabidopsis lyrata subsp. lyrata]
gi|297332198|gb|EFH62616.1| F22C12.4 [Arabidopsis lyrata
subsp. lyrata]
Length = 287
Score = 60.1 bits (144), Expect(3) = 1e-12
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = +1
Query: 4 EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQ 114
+YSMQLNASRI+VLQAQDD++N++KE AAKELL VSQ
Sbjct: 69 DYSMQLNASRIKVLQAQDDIVNAMKEEAAKELLKVSQ 105
Score = 33.9 bits (76), Expect(3) = 1e-12
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 161 KAKVHSPEILVDKQTFLP 214
KAKVH+PEI+VDK FLP
Sbjct: 162 KAKVHAPEIIVDKDIFLP 179
Score = 23.1 bits (48), Expect(3) = 1e-12
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 123 KYKKLLKDLIVQ 158
+YK LLKDLIVQ
Sbjct: 115 QYKHLLKDLIVQ 126
>ref|XP_002872553.1| hypothetical protein ARALYDRAFT_489953 [Arabidopsis lyrata subsp.
lyrata] gi|297318390|gb|EFH48812.1| hypothetical protein
ARALYDRAFT_489953 [Arabidopsis lyrata subsp. lyrata]
Length = 230
Score = 60.5 bits (145), Expect(3) = 1e-12
Identities = 29/47 (61%), Positives = 40/47 (85%)
Frame = +1
Query: 4 EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQDKLSTKSF*K 144
+YSMQLNASRI+VLQAQDD++N++K+ AAK+LL VS+D+ + K K
Sbjct: 69 DYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLK 115
Score = 33.1 bits (74), Expect(3) = 1e-12
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 155 SAKAKVHSPEILVDKQTFLPSDLTSQATQGPH 250
+ KAKVH+PE+ VD + FLP S G H
Sbjct: 154 AGKAKVHAPEVAVDTKIFLPPPPKSNDPHGLH 185
Score = 23.5 bits (49), Expect(3) = 1e-12
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3
Query: 126 YKKLLKDLIVQ 158
YK+LLKDLIVQ
Sbjct: 110 YKQLLKDLIVQ 120
>ref|NP_192853.1| V-type proton ATPase subunit E1 [Arabidopsis thaliana]
gi|12643432|sp|Q39258.2|VATE1_ARATH RecName: Full=V-type
proton ATPase subunit E1; Short=V-ATPase subunit E1;
AltName: Full=Protein EMBRYO DEFECTIVE 2448; AltName:
Full=Vacuolar H(+)-ATPase subunit E isoform 1; AltName:
Full=Vacuolar proton pump subunit E1
gi|3600058|gb|AAC35545.1| similar to vacuolar ATPases
[Arabidopsis thaliana] gi|4850294|emb|CAB43050.1|
H+-transporting ATPase chain E, vacuolar [Arabidopsis
thaliana] gi|7267814|emb|CAB81216.1| H+-transporting
ATPase chain E, vacuolar [Arabidopsis thaliana]
gi|17473677|gb|AAL38295.1| similar to vacuolar ATPases
[Arabidopsis thaliana] gi|20148607|gb|AAM10194.1|
similar to vacuolar ATPases [Arabidopsis thaliana]
gi|332657578|gb|AEE82978.1| V-type proton ATPase subunit
E1 [Arabidopsis thaliana]
Length = 230
Score = 60.5 bits (145), Expect(3) = 1e-12
Identities = 29/47 (61%), Positives = 40/47 (85%)
Frame = +1
Query: 4 EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQDKLSTKSF*K 144
+YSMQLNASRI+VLQAQDD++N++K+ AAK+LL VS+D+ + K K
Sbjct: 69 DYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLK 115
Score = 33.1 bits (74), Expect(3) = 1e-12
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 155 SAKAKVHSPEILVDKQTFLPSDLTSQATQGPH 250
+ KAKVH+PE+ VD + FLP S G H
Sbjct: 154 AGKAKVHAPEVAVDTKIFLPPPPKSNDPHGLH 185
Score = 23.5 bits (49), Expect(3) = 1e-12
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3
Query: 126 YKKLLKDLIVQ 158
YK+LLKDLIVQ
Sbjct: 110 YKQLLKDLIVQ 120