BLASTX nr result

ID: Coptis25_contig00002993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002993
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22268.1| unknown [Picea sitchensis] gi|116783111|gb|ABK227...    62   7e-13
ref|NP_001130960.1| uncharacterized protein LOC100192065 [Zea ma...    60   1e-12
ref|XP_002886357.1| F22C12.4 [Arabidopsis lyrata subsp. lyrata] ...    60   1e-12
ref|XP_002872553.1| hypothetical protein ARALYDRAFT_489953 [Arab...    60   1e-12
ref|NP_192853.1| V-type proton ATPase subunit E1 [Arabidopsis th...    60   1e-12

>gb|ABK22268.1| unknown [Picea sitchensis] gi|116783111|gb|ABK22797.1| unknown
           [Picea sitchensis] gi|116786762|gb|ABK24227.1| unknown
           [Picea sitchensis] gi|224285131|gb|ACN40293.1| unknown
           [Picea sitchensis] gi|224285269|gb|ACN40360.1| unknown
           [Picea sitchensis]
          Length = 229

 Score = 62.4 bits (150), Expect(3) = 7e-13
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = +1

Query: 4   EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQD 117
           EYSMQLNASRI+VLQAQDDL+ S+KESA KE+L +SQD
Sbjct: 69  EYSMQLNASRIKVLQAQDDLVASMKESAGKEILAISQD 106



 Score = 31.6 bits (70), Expect(3) = 7e-13
 Identities = 11/20 (55%), Positives = 18/20 (90%)
 Frame = +2

Query: 161 KAKVHSPEILVDKQTFLPSD 220
           KA VH+P+I++D+QT+LP +
Sbjct: 156 KANVHAPQIILDEQTYLPPE 175



 Score = 23.9 bits (50), Expect(3) = 7e-13
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 126 YKKLLKDLIVQ 158
           YK+LLKDLIVQ
Sbjct: 110 YKRLLKDLIVQ 120


>ref|NP_001130960.1| uncharacterized protein LOC100192065 [Zea mays]
           gi|194690560|gb|ACF79364.1| unknown [Zea mays]
           gi|195628324|gb|ACG35992.1| vacuolar ATP synthase
           subunit E [Zea mays] gi|414875669|tpg|DAA52800.1| TPA:
           Vacuolar ATP synthase subunit E [Zea mays]
          Length = 230

 Score = 60.5 bits (145), Expect(3) = 1e-12
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = +1

Query: 4   EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQDKLSTKSF*K 144
           +YSMQLNASRI+VLQAQDDL+  + ESA KELLC+S+D  + K   K
Sbjct: 69  DYSMQLNASRIKVLQAQDDLVTDMLESARKELLCISRDHPTYKKLLK 115



 Score = 34.7 bits (78), Expect(3) = 1e-12
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +2

Query: 143 RSHCSAKAKVHSPEILVDKQTFLPSDLTSQATQGP 247
           R+  + KAKV+ PEI+VD+Q +LPS  +     GP
Sbjct: 150 RNEYADKAKVYPPEIVVDRQIYLPSAPSHYQAPGP 184



 Score = 22.3 bits (46), Expect(3) = 1e-12
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +3

Query: 126 YKKLLKDLIVQ 158
           YKKLLK LIVQ
Sbjct: 110 YKKLLKTLIVQ 120


>ref|XP_002886357.1| F22C12.4 [Arabidopsis lyrata subsp. lyrata]
           gi|297332198|gb|EFH62616.1| F22C12.4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 287

 Score = 60.1 bits (144), Expect(3) = 1e-12
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = +1

Query: 4   EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQ 114
           +YSMQLNASRI+VLQAQDD++N++KE AAKELL VSQ
Sbjct: 69  DYSMQLNASRIKVLQAQDDIVNAMKEEAAKELLKVSQ 105



 Score = 33.9 bits (76), Expect(3) = 1e-12
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +2

Query: 161 KAKVHSPEILVDKQTFLP 214
           KAKVH+PEI+VDK  FLP
Sbjct: 162 KAKVHAPEIIVDKDIFLP 179



 Score = 23.1 bits (48), Expect(3) = 1e-12
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +3

Query: 123 KYKKLLKDLIVQ 158
           +YK LLKDLIVQ
Sbjct: 115 QYKHLLKDLIVQ 126


>ref|XP_002872553.1| hypothetical protein ARALYDRAFT_489953 [Arabidopsis lyrata subsp.
           lyrata] gi|297318390|gb|EFH48812.1| hypothetical protein
           ARALYDRAFT_489953 [Arabidopsis lyrata subsp. lyrata]
          Length = 230

 Score = 60.5 bits (145), Expect(3) = 1e-12
 Identities = 29/47 (61%), Positives = 40/47 (85%)
 Frame = +1

Query: 4   EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQDKLSTKSF*K 144
           +YSMQLNASRI+VLQAQDD++N++K+ AAK+LL VS+D+ + K   K
Sbjct: 69  DYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLK 115



 Score = 33.1 bits (74), Expect(3) = 1e-12
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 155 SAKAKVHSPEILVDKQTFLPSDLTSQATQGPH 250
           + KAKVH+PE+ VD + FLP    S    G H
Sbjct: 154 AGKAKVHAPEVAVDTKIFLPPPPKSNDPHGLH 185



 Score = 23.5 bits (49), Expect(3) = 1e-12
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 126 YKKLLKDLIVQ 158
           YK+LLKDLIVQ
Sbjct: 110 YKQLLKDLIVQ 120


>ref|NP_192853.1| V-type proton ATPase subunit E1 [Arabidopsis thaliana]
           gi|12643432|sp|Q39258.2|VATE1_ARATH RecName: Full=V-type
           proton ATPase subunit E1; Short=V-ATPase subunit E1;
           AltName: Full=Protein EMBRYO DEFECTIVE 2448; AltName:
           Full=Vacuolar H(+)-ATPase subunit E isoform 1; AltName:
           Full=Vacuolar proton pump subunit E1
           gi|3600058|gb|AAC35545.1| similar to vacuolar ATPases
           [Arabidopsis thaliana] gi|4850294|emb|CAB43050.1|
           H+-transporting ATPase chain E, vacuolar [Arabidopsis
           thaliana] gi|7267814|emb|CAB81216.1| H+-transporting
           ATPase chain E, vacuolar [Arabidopsis thaliana]
           gi|17473677|gb|AAL38295.1| similar to vacuolar ATPases
           [Arabidopsis thaliana] gi|20148607|gb|AAM10194.1|
           similar to vacuolar ATPases [Arabidopsis thaliana]
           gi|332657578|gb|AEE82978.1| V-type proton ATPase subunit
           E1 [Arabidopsis thaliana]
          Length = 230

 Score = 60.5 bits (145), Expect(3) = 1e-12
 Identities = 29/47 (61%), Positives = 40/47 (85%)
 Frame = +1

Query: 4   EYSMQLNASRIQVLQAQDDLINSVKESAAKELLCVSQDKLSTKSF*K 144
           +YSMQLNASRI+VLQAQDD++N++K+ AAK+LL VS+D+ + K   K
Sbjct: 69  DYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLK 115



 Score = 33.1 bits (74), Expect(3) = 1e-12
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 155 SAKAKVHSPEILVDKQTFLPSDLTSQATQGPH 250
           + KAKVH+PE+ VD + FLP    S    G H
Sbjct: 154 AGKAKVHAPEVAVDTKIFLPPPPKSNDPHGLH 185



 Score = 23.5 bits (49), Expect(3) = 1e-12
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 126 YKKLLKDLIVQ 158
           YK+LLKDLIVQ
Sbjct: 110 YKQLLKDLIVQ 120


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