BLASTX nr result

ID: Coptis25_contig00002986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002986
         (1570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277654.1| PREDICTED: uncharacterized protein LOC100261...    91   1e-15
emb|CAN78371.1| hypothetical protein VITISV_043533 [Vitis vinifera]    89   4e-15
ref|XP_003529611.1| PREDICTED: uncharacterized protein LOC100804...    74   8e-11
ref|XP_003546131.1| PREDICTED: uncharacterized protein LOC100786...    72   3e-10
ref|XP_002517157.1| chloroplast-targeted copper chaperone, putat...    72   5e-10

>ref|XP_002277654.1| PREDICTED: uncharacterized protein LOC100261454 [Vitis vinifera]
          Length = 491

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 56/110 (50%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
 Frame = -1

Query: 583 NIPAVQGLPAPAMNASTGGG------------GYFQGAGPEVMAGXXXXXXXXXXXXXXX 440
           N+PAVQGLPA A+NA   GG            GYFQGAGPEVMAG               
Sbjct: 383 NMPAVQGLPAGAINAGGAGGGAPPGYGGGVPPGYFQGAGPEVMAGNPYYQQQLAAMMMNQ 442

Query: 439 QRANGNERFQPMMYARXXXXXXXXXXXXXXXXXXXTHFFSDENTNSCNVM 290
           QRA+GNERFQPMMYAR                   THFFSDENT+SCNVM
Sbjct: 443 QRAHGNERFQPMMYAR-PPPAVNYLPPYPPQPDPYTHFFSDENTSSCNVM 491


>emb|CAN78371.1| hypothetical protein VITISV_043533 [Vitis vinifera]
          Length = 136

 Score = 88.6 bits (218), Expect = 4e-15
 Identities = 57/110 (51%), Positives = 61/110 (55%), Gaps = 12/110 (10%)
 Frame = -1

Query: 583 NIPAVQGLPAPAMNAST---------GGG---GYFQGAGPEVMAGXXXXXXXXXXXXXXX 440
           N+PAVQGLPA A+NA           GGG   GYFQGAGPEVMAG               
Sbjct: 28  NMPAVQGLPAGAINAGGVSGGAPPGYGGGVPPGYFQGAGPEVMAGNPYYQQQLAAMMMNQ 87

Query: 439 QRANGNERFQPMMYARXXXXXXXXXXXXXXXXXXXTHFFSDENTNSCNVM 290
           QRA+GNERFQPMMYAR                   THFFSDENT+SCNVM
Sbjct: 88  QRAHGNERFQPMMYAR-PPPAVNYLPPYPPQPDPYTHFFSDENTSSCNVM 136


>ref|XP_003529611.1| PREDICTED: uncharacterized protein LOC100804757 [Glycine max]
          Length = 490

 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 50/111 (45%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
 Frame = -1

Query: 583 NIPAVQGLPAPAMNASTGGGGYFQGAGPEVMAG------------XXXXXXXXXXXXXXX 440
           NIPAVQGLPA  +N    GGG+FQGAGP+ M G                           
Sbjct: 384 NIPAVQGLPAGPVN----GGGFFQGAGPDAMPGNPFQQQQQQQQQQQLQQQYMAAAMMNQ 439

Query: 439 QRANGNERFQPMMYAR-XXXXXXXXXXXXXXXXXXXTHFFSDENTNSCNVM 290
           QRA GN+RFQPMMYAR                    THFFSDENT+SCNVM
Sbjct: 440 QRAMGNDRFQPMMYARPPPAVNYMYPPYPYPPPDPYTHFFSDENTSSCNVM 490


>ref|XP_003546131.1| PREDICTED: uncharacterized protein LOC100786567 [Glycine max]
          Length = 492

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 48/106 (45%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
 Frame = -1

Query: 583 NIPAVQGLPAPA-MNASTGGGGYFQGAG--PEVM-AGXXXXXXXXXXXXXXXQRANGNER 416
           NIPAVQGLPA A MN    GGGYFQG G  P++M  G               QRA GN+R
Sbjct: 387 NIPAVQGLPAAAAMNGGAAGGGYFQGGGGGPDMMPGGNSYQQQQYMAAMMNQQRAMGNDR 446

Query: 415 FQPMMYAR----XXXXXXXXXXXXXXXXXXXTHFFSDENTNSCNVM 290
           FQPMMYAR                       +++FSDENT+SC+VM
Sbjct: 447 FQPMMYARPPMAVNYMYPPPYSYPPPPHEPYSNYFSDENTSSCSVM 492


>ref|XP_002517157.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]
           gi|223543792|gb|EEF45320.1| chloroplast-targeted copper
           chaperone, putative [Ricinus communis]
          Length = 526

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 52/119 (43%), Positives = 56/119 (47%), Gaps = 21/119 (17%)
 Frame = -1

Query: 583 NIPAVQGLPAPAM----NASTGGGGYFQGAGPEVMAGXXXXXXXXXXXXXXXQ----RAN 428
           NIPAVQGLPA A         GG GYFQGAGP++M G                    RA 
Sbjct: 408 NIPAVQGLPAGAAMGGGGPGAGGNGYFQGAGPDLMPGNPYHHQQQQQQYLQAIMNQQRAM 467

Query: 427 GNERFQPMMYAR-------------XXXXXXXXXXXXXXXXXXXTHFFSDENTNSCNVM 290
           GNERFQPMMYAR                                T+FFSDENT+SCNVM
Sbjct: 468 GNERFQPMMYARPPPAVNYMPPYPYSYAPPPHQGSDPYXXSDPYTNFFSDENTSSCNVM 526


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