BLASTX nr result

ID: Coptis25_contig00002983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002983
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512797.1| conserved hypothetical protein [Ricinus comm...   231   2e-58
emb|CBI21242.3| unnamed protein product [Vitis vinifera]              222   1e-55
ref|XP_002278174.1| PREDICTED: uncharacterized protein LOC100261...   222   1e-55
ref|XP_002321064.1| predicted protein [Populus trichocarpa] gi|1...   213   6e-53
ref|XP_003518159.1| PREDICTED: uncharacterized protein LOC100780...   194   3e-47

>ref|XP_002512797.1| conserved hypothetical protein [Ricinus communis]
           gi|223547808|gb|EEF49300.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  231 bits (590), Expect = 2e-58
 Identities = 120/202 (59%), Positives = 147/202 (72%), Gaps = 7/202 (3%)
 Frame = -1

Query: 815 KMHSRVNSVLAKRVWNYFRVAYFMMRKGLISKRKLIMDINLMMKRGKLLRKTIGNLKFHH 636
           ++H RVNSVLAKR+WN  RV +FM+RKGL++KRKLIMD+NLMMKRGKLLRK++ NL  HH
Sbjct: 2   EVHPRVNSVLAKRLWNVLRVTFFMIRKGLVTKRKLIMDMNLMMKRGKLLRKSLSNLLSHH 61

Query: 635 HHEHHSRNATRGRFGLQEYEFSCSDSPNPVFYHVAKRKHHFFPCINPPPT-DLEEHPKTV 459
              HHSRN TRG +GLQEYEFSCS+SPNPVF+HV KRKHH+FPCIN P   + EE+ K +
Sbjct: 62  ---HHSRNMTRGSYGLQEYEFSCSNSPNPVFFHVPKRKHHYFPCINQPEVIEEEENGKAL 118

Query: 458 VTLPKIEYSPEPEYSYNL------PFNVAHGEKSVPSPFSIRIXXXXXXXXXXXXXXXXN 297
           V LPK      PEY++N+       ++ A GEK  PSPFS+R+                 
Sbjct: 119 VMLPK-----TPEYTFNIHLDNSAAYDFAPGEKRSPSPFSVRV--SDYSSEEENCDAGNG 171

Query: 296 QIDNDAEEFIRRFYEQLRVQSR 231
           Q+D++AEEFIRRFYEQLRVQSR
Sbjct: 172 QVDDEAEEFIRRFYEQLRVQSR 193


>emb|CBI21242.3| unnamed protein product [Vitis vinifera]
          Length = 207

 Score =  222 bits (566), Expect = 1e-55
 Identities = 119/202 (58%), Positives = 141/202 (69%), Gaps = 7/202 (3%)
 Frame = -1

Query: 815 KMHSRVNSVLAKRVWNYFRVAYFMMRKGLISKRKLIMDINLMMKRGKLLRKTIGNLKFHH 636
           ++HS VNSVL KR+WN+ R+ +FMMRKGLISKRKLIMD+NLMMKRGKLLRKT GNL   H
Sbjct: 2   EVHSPVNSVLGKRLWNFLRITFFMMRKGLISKRKLIMDMNLMMKRGKLLRKTWGNLMSIH 61

Query: 635 HHEHHSRNATRGRFGLQEYEFSCSDSPNPVFYHVAKRKHHFFPCINPPPTDLEE--HPKT 462
              HHSR+  RG  G+QEYEFSCS+SPNPVF+H+ KRKHH+FPCIN PP D+EE    K 
Sbjct: 62  ---HHSRSMARGSLGIQEYEFSCSNSPNPVFFHLPKRKHHYFPCIN-PPEDIEEPQDDKA 117

Query: 461 VVTLPKIEYSPEPEYSYNLPFNV-----AHGEKSVPSPFSIRIXXXXXXXXXXXXXXXXN 297
           VV LPK      PEY+ N PF+      A     +PSPFS+R+                 
Sbjct: 118 VVLLPK-----TPEYTVNFPFDTSDLAPADKPSPLPSPFSVRV--SNYSSEEEMDVGGNR 170

Query: 296 QIDNDAEEFIRRFYEQLRVQSR 231
           Q+D++AEEFIRRFYEQLR QSR
Sbjct: 171 QVDDEAEEFIRRFYEQLRAQSR 192


>ref|XP_002278174.1| PREDICTED: uncharacterized protein LOC100261750 [Vitis vinifera]
          Length = 208

 Score =  222 bits (566), Expect = 1e-55
 Identities = 119/202 (58%), Positives = 141/202 (69%), Gaps = 7/202 (3%)
 Frame = -1

Query: 815 KMHSRVNSVLAKRVWNYFRVAYFMMRKGLISKRKLIMDINLMMKRGKLLRKTIGNLKFHH 636
           ++HS VNSVL KR+WN+ R+ +FMMRKGLISKRKLIMD+NLMMKRGKLLRKT GNL   H
Sbjct: 3   EVHSPVNSVLGKRLWNFLRITFFMMRKGLISKRKLIMDMNLMMKRGKLLRKTWGNLMSIH 62

Query: 635 HHEHHSRNATRGRFGLQEYEFSCSDSPNPVFYHVAKRKHHFFPCINPPPTDLEE--HPKT 462
              HHSR+  RG  G+QEYEFSCS+SPNPVF+H+ KRKHH+FPCIN PP D+EE    K 
Sbjct: 63  ---HHSRSMARGSLGIQEYEFSCSNSPNPVFFHLPKRKHHYFPCIN-PPEDIEEPQDDKA 118

Query: 461 VVTLPKIEYSPEPEYSYNLPFNV-----AHGEKSVPSPFSIRIXXXXXXXXXXXXXXXXN 297
           VV LPK      PEY+ N PF+      A     +PSPFS+R+                 
Sbjct: 119 VVLLPK-----TPEYTVNFPFDTSDLAPADKPSPLPSPFSVRV--SNYSSEEEMDVGGNR 171

Query: 296 QIDNDAEEFIRRFYEQLRVQSR 231
           Q+D++AEEFIRRFYEQLR QSR
Sbjct: 172 QVDDEAEEFIRRFYEQLRAQSR 193


>ref|XP_002321064.1| predicted protein [Populus trichocarpa] gi|118485866|gb|ABK94780.1|
           unknown [Populus trichocarpa]
           gi|222861837|gb|EEE99379.1| predicted protein [Populus
           trichocarpa]
          Length = 211

 Score =  213 bits (542), Expect = 6e-53
 Identities = 116/209 (55%), Positives = 144/209 (68%), Gaps = 14/209 (6%)
 Frame = -1

Query: 815 KMHSRVNSVLAKRVWNYFRVAYFMMRKGLISKRKLIMDINLMMKRGKLLRKTIGNL-KFH 639
           ++H RVNS+LAKR+WN  RV +FM+RKGL+SKRKLIMD+NLMMKRGKLLRK++ NL   H
Sbjct: 2   EVHPRVNSMLAKRLWNVLRVTFFMIRKGLVSKRKLIMDMNLMMKRGKLLRKSLSNLMSLH 61

Query: 638 HH-HEHHSRNATRGRFGLQEYEFSCSDSPNPVFYHVAKRKHHFFPCINPPPT------DL 480
           HH H HHS++  RG FGLQEYEFSCS+SP+ VF+ + KRKHH+FPCIN P        + 
Sbjct: 62  HHTHHHHSKDLARGSFGLQEYEFSCSNSPDLVFFRMPKRKHHYFPCINLPEVIEEDQLEA 121

Query: 479 EEHPKTVVTLPKIEYSPEPEYSYNLPFN----VAHGEKSVP--SPFSIRIXXXXXXXXXX 318
           EE    VV +PK      PEY++N+ F+     A GEK  P  SPFS+R+          
Sbjct: 122 EESKGAVVMVPK-----TPEYTFNIHFDHASEFAPGEKRSPLLSPFSVRV---SDYSSED 173

Query: 317 XXXXXXNQIDNDAEEFIRRFYEQLRVQSR 231
                  Q+D++AEEFIRRFYEQLRVQSR
Sbjct: 174 ENDGGNVQVDDEAEEFIRRFYEQLRVQSR 202


>ref|XP_003518159.1| PREDICTED: uncharacterized protein LOC100780921 [Glycine max]
          Length = 213

 Score =  194 bits (493), Expect = 3e-47
 Identities = 103/202 (50%), Positives = 135/202 (66%), Gaps = 15/202 (7%)
 Frame = -1

Query: 791 VLAKRVWNYFRVAYFMMRKGLISKRKLIMDINLMMKRGKLLRKTIGNLKFHHHHEHHSRN 612
           V+AK++WN  R+ +FM+RKGL+SKRKLIMD+NLMMK+GKLLRK++ N    HHH H+S++
Sbjct: 7   VIAKKLWNVLRITFFMIRKGLVSKRKLIMDMNLMMKKGKLLRKSMSNFMSSHHHHHYSKS 66

Query: 611 ATRGRFGLQEYEFSCSDSPNPVFYHVAKRKHHF-FPCINPPPTDLEEHPKTVVTLPKIEY 435
             RG +G+QEYEFSCS+SPNPVF+HV KRKHHF FPC+N P    E + + VV +P    
Sbjct: 67  LARG-YGMQEYEFSCSNSPNPVFFHVPKRKHHFNFPCMNTPEVVEEPNNRPVVLVPN--- 122

Query: 434 SPEPEYSYNLPF------NVAHGEKSVP-----SPFSIRI---XXXXXXXXXXXXXXXXN 297
           +  PEY++NL F      + A GE+  P     SPFS+RI                    
Sbjct: 123 NMTPEYTFNLRFDNINASDFAPGERKSPLLSSSSPFSVRISNYSSEDEENEEQEGGNGNG 182

Query: 296 QIDNDAEEFIRRFYEQLRVQSR 231
            +D+ AE+FIRRFYEQLR+QSR
Sbjct: 183 HVDDQAEDFIRRFYEQLRMQSR 204


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