BLASTX nr result

ID: Coptis25_contig00002970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002970
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80381.1| hypothetical protein VITISV_015320 [Vitis vinifera]   102   6e-39
ref|XP_002263910.1| PREDICTED: ankyrin repeat domain-containing ...   101   1e-38
ref|XP_002518131.1| protein binding protein, putative [Ricinus c...   102   4e-37
ref|XP_004134010.1| PREDICTED: ankyrin repeat domain-containing ...   104   8e-37
ref|XP_002299280.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-36

>emb|CAN80381.1| hypothetical protein VITISV_015320 [Vitis vinifera]
          Length = 653

 Score =  102 bits (253), Expect(3) = 6e-39
 Identities = 57/89 (64%), Positives = 66/89 (74%), Gaps = 5/89 (5%)
 Frame = -3

Query: 361 EWFGQWKA*VYDMHNVVVSIKSRRV--AITDDGFFSSCNETESDYGYL---LTEDEKSQL 197
           E  G W+A VYDMHNVVVSIKSRRV  A+TDD FFSSCNE E++   L   LTEDE+ QL
Sbjct: 286 EMVGAWRAKVYDMHNVVVSIKSRRVPGAMTDDEFFSSCNENEAENEELDDILTEDERRQL 345

Query: 196 ELALKIDSSESVPENGISDGFITHRHSVY 110
           E+ALK+DSS+   ENG  +G I HRHS Y
Sbjct: 346 EVALKLDSSDMTNENG--EGIIGHRHSCY 372



 Score = 60.8 bits (146), Expect(3) = 6e-39
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -2

Query: 110 FGGWRKPEAKHETQKILLPPRSSLCVEEKVSDLLGD 3
           FGGWRK ++K E QK + PPRSSLCV+EKVSDLLGD
Sbjct: 398 FGGWRKRDSKQEGQKKIAPPRSSLCVDEKVSDLLGD 433



 Score = 44.7 bits (104), Expect(3) = 6e-39
 Identities = 27/45 (60%), Positives = 28/45 (62%), Gaps = 10/45 (22%)
 Frame = -2

Query: 452 DAEVQQ*VTAMSQT----------REVLLPHLTWRRQENTGMVWA 348
           DAEVQQ V AMSQT          + VLLP LTWRRQE T MV A
Sbjct: 246 DAEVQQEVAAMSQTNIFRPGIDVTQAVLLPQLTWRRQEKTEMVGA 290


>ref|XP_002263910.1| PREDICTED: ankyrin repeat domain-containing protein 13C [Vitis
           vinifera]
          Length = 652

 Score =  101 bits (251), Expect(3) = 1e-38
 Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
 Frame = -3

Query: 361 EWFGQWKA*VYDMHNVVVSIKSRRV--AITDDGFFSSCNETE---SDYGYLLTEDEKSQL 197
           E  G W+A VYDMHNVVVSIKSRRV  A+TDD FFSSCNE E    +   +LTEDE+ QL
Sbjct: 286 EMVGAWRAKVYDMHNVVVSIKSRRVPGAMTDDEFFSSCNENEVENEELDDILTEDERRQL 345

Query: 196 ELALKIDSSESVPENGISDGFITHRHSVY 110
           E+ALK+DSS+   ENG  +G I HRHS Y
Sbjct: 346 EVALKLDSSDMTNENG--EGIIGHRHSCY 372



 Score = 60.8 bits (146), Expect(3) = 1e-38
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -2

Query: 110 FGGWRKPEAKHETQKILLPPRSSLCVEEKVSDLLGD 3
           FGGWRK ++K E QK + PPRSSLCV+EKVSDLLGD
Sbjct: 398 FGGWRKRDSKQEGQKKIAPPRSSLCVDEKVSDLLGD 433



 Score = 44.7 bits (104), Expect(3) = 1e-38
 Identities = 27/45 (60%), Positives = 28/45 (62%), Gaps = 10/45 (22%)
 Frame = -2

Query: 452 DAEVQQ*VTAMSQT----------REVLLPHLTWRRQENTGMVWA 348
           DAEVQQ V AMSQT          + VLLP LTWRRQE T MV A
Sbjct: 246 DAEVQQEVAAMSQTNIFRPGIDVTQAVLLPQLTWRRQEKTEMVGA 290


>ref|XP_002518131.1| protein binding protein, putative [Ricinus communis]
           gi|223542727|gb|EEF44264.1| protein binding protein,
           putative [Ricinus communis]
          Length = 652

 Score =  102 bits (253), Expect(3) = 4e-37
 Identities = 57/89 (64%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
 Frame = -3

Query: 361 EWFGQWKA*VYDMHNVVVSIKSRRV--AITDDGFFSSCNETES---DYGYLLTEDEKSQL 197
           E  G WKA VYDMHNVVVSIKSRRV  A+TDD FFSSCNE E+   +   +LTE+E+ QL
Sbjct: 286 ELVGPWKAKVYDMHNVVVSIKSRRVPGAMTDDEFFSSCNENETESEELSDILTEEERRQL 345

Query: 196 ELALKIDSSESVPENGISDGFITHRHSVY 110
           E+ALK+DS E   ENG  DG I HRHS Y
Sbjct: 346 EVALKLDSLELANENG--DGIIAHRHSCY 372



 Score = 61.6 bits (148), Expect(3) = 4e-37
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -2

Query: 110 FGGWRKPEAKHETQKILLPPRSSLCVEEKVSDLLGD 3
           FGGWRK +AK E QK ++PPRSSLCV+EKVSDLLGD
Sbjct: 400 FGGWRKRDAKVEGQKKIVPPRSSLCVDEKVSDLLGD 435



 Score = 37.7 bits (86), Expect(3) = 4e-37
 Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 10/43 (23%)
 Frame = -2

Query: 452 DAEVQQ*VTAMSQT----------REVLLPHLTWRRQENTGMV 354
           + EV+Q V AMSQT          + VLLP LTWRRQE T +V
Sbjct: 246 EEEVRQEVAAMSQTNIFRPGIDVTQAVLLPQLTWRRQEKTELV 288


>ref|XP_004134010.1| PREDICTED: ankyrin repeat domain-containing protein 13C-B-like
           [Cucumis sativus] gi|449487530|ref|XP_004157672.1|
           PREDICTED: ankyrin repeat domain-containing protein
           13C-B-like [Cucumis sativus]
          Length = 651

 Score =  104 bits (259), Expect(3) = 8e-37
 Identities = 57/89 (64%), Positives = 66/89 (74%), Gaps = 5/89 (5%)
 Frame = -3

Query: 361 EWFGQWKA*VYDMHNVVVSIKSRRV--AITDDGFFSSCNETES---DYGYLLTEDEKSQL 197
           E  G WKA VYDMHNVVVSIKSRRV  A+TDD FFSSCNE E+   ++  +LTEDE+ QL
Sbjct: 286 EQVGAWKAKVYDMHNVVVSIKSRRVPGAMTDDEFFSSCNENETESEEFDDILTEDERKQL 345

Query: 196 ELALKIDSSESVPENGISDGFITHRHSVY 110
           E ALK+DSSE   ENG  DG + HRHS +
Sbjct: 346 ENALKLDSSELTSENG--DGIVAHRHSCF 372



 Score = 55.1 bits (131), Expect(3) = 8e-37
 Identities = 24/36 (66%), Positives = 31/36 (86%)
 Frame = -2

Query: 110 FGGWRKPEAKHETQKILLPPRSSLCVEEKVSDLLGD 3
           FGGWRK ++K+E QK + PPRSSL +++KVSDLLGD
Sbjct: 398 FGGWRKRDSKNEGQKKIAPPRSSLSMDDKVSDLLGD 433



 Score = 40.8 bits (94), Expect(3) = 8e-37
 Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 10/48 (20%)
 Frame = -2

Query: 461 QGKDAEVQQ*VTAMSQT----------REVLLPHLTWRRQENTGMVWA 348
           Q  + E++Q VTAMSQT          + VLLP LTWRRQE T  V A
Sbjct: 243 QATEEEIRQEVTAMSQTNIFRPGIDVTQAVLLPQLTWRRQEKTEQVGA 290


>ref|XP_002299280.1| predicted protein [Populus trichocarpa] gi|222846538|gb|EEE84085.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score = 98.2 bits (243), Expect(3) = 2e-36
 Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 5/89 (5%)
 Frame = -3

Query: 361 EWFGQWKA*VYDMHNVVVSIKSRRV--AITDDGFFSSCNETES---DYGYLLTEDEKSQL 197
           E  G WKA VYDMHNVVVSIKSR+V  A++DD FFSSCN+ E+   +   +LTE+E+ QL
Sbjct: 286 EMVGSWKAKVYDMHNVVVSIKSRKVPGAMSDDEFFSSCNDNETESEELNDILTEEERRQL 345

Query: 196 ELALKIDSSESVPENGISDGFITHRHSVY 110
           E+ALK+++SE   ENG  DG I HRHS Y
Sbjct: 346 EVALKLETSELSSENG--DGIIAHRHSCY 372



 Score = 60.5 bits (145), Expect(3) = 2e-36
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -2

Query: 110 FGGWRKPEAKHETQKILLPPRSSLCVEEKVSDLLGD 3
           FGGWRK ++K E QK ++PPRSSLCV+EKVSDLLGD
Sbjct: 385 FGGWRKRDSKVEGQKKIVPPRSSLCVDEKVSDLLGD 420



 Score = 40.4 bits (93), Expect(3) = 2e-36
 Identities = 24/43 (55%), Positives = 26/43 (60%), Gaps = 10/43 (23%)
 Frame = -2

Query: 452 DAEVQQ*VTAMSQT----------REVLLPHLTWRRQENTGMV 354
           D EV+Q V AMSQT          + VLLP LTWRRQE T MV
Sbjct: 246 DEEVRQEVAAMSQTNIFRPGIDVTQAVLLPQLTWRRQEKTEMV 288


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