BLASTX nr result

ID: Coptis25_contig00002968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002968
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC80109.1| hypothetical protein [Oryza sativa Japonica Group]    122   2e-26
gb|EEE67070.1| hypothetical protein OsJ_24036 [Oryza sativa Japo...   122   2e-26
gb|EEC81939.1| hypothetical protein OsI_25807 [Oryza sativa Indi...   122   2e-26
dbj|BAH01636.1| unnamed protein product [Oryza sativa Japonica G...   122   2e-26
ref|NP_001175171.1| Os07g0436000 [Oryza sativa Japonica Group] g...   122   2e-26

>dbj|BAC80109.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 675

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/100 (67%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
 Frame = -2

Query: 369 RLGRHSVDIAEKGDELRRG--RDTRKPXXXXXXXXXXXXXXXXXEYKKGLRPILWLSPNF 196
           R GRHSVD+  +GDE RRG  RD R+P                 EYKKGLRP+LWLSPNF
Sbjct: 447 RPGRHSVDVV-RGDESRRGKERDYRRPAASSECGHRRKEGSKESEYKKGLRPVLWLSPNF 505

Query: 195 PLQTEELLPLLDFLANKVKAIRRLRQLLTTNLPPETFPVK 76
           PL+TEELLPLLD LANKVKAIRRLR LLTT LPP TFPVK
Sbjct: 506 PLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPGTFPVK 545


>gb|EEE67070.1| hypothetical protein OsJ_24036 [Oryza sativa Japonica Group]
          Length = 533

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/100 (67%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
 Frame = -2

Query: 369 RLGRHSVDIAEKGDELRRG--RDTRKPXXXXXXXXXXXXXXXXXEYKKGLRPILWLSPNF 196
           R GRHSVD+  +GDE RRG  RD R+P                 EYKKGLRP+LWLSPNF
Sbjct: 303 RPGRHSVDVV-RGDESRRGKERDYRRPAASSECGHRRKEGSKESEYKKGLRPVLWLSPNF 361

Query: 195 PLQTEELLPLLDFLANKVKAIRRLRQLLTTNLPPETFPVK 76
           PL+TEELLPLLD LANKVKAIRRLR LLTT LPP TFPVK
Sbjct: 362 PLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPGTFPVK 401


>gb|EEC81939.1| hypothetical protein OsI_25807 [Oryza sativa Indica Group]
          Length = 677

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/100 (67%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
 Frame = -2

Query: 369 RLGRHSVDIAEKGDELRRG--RDTRKPXXXXXXXXXXXXXXXXXEYKKGLRPILWLSPNF 196
           R GRHSVD+  +GDE RRG  RD R+P                 EYKKGLRP+LWLSPNF
Sbjct: 447 RPGRHSVDVV-RGDESRRGKERDYRRPAASSECGHRRKEGSKESEYKKGLRPVLWLSPNF 505

Query: 195 PLQTEELLPLLDFLANKVKAIRRLRQLLTTNLPPETFPVK 76
           PL+TEELLPLLD LANKVKAIRRLR LLTT LPP TFPVK
Sbjct: 506 PLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPGTFPVK 545


>dbj|BAH01636.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 656

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/100 (67%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
 Frame = -2

Query: 369 RLGRHSVDIAEKGDELRRG--RDTRKPXXXXXXXXXXXXXXXXXEYKKGLRPILWLSPNF 196
           R GRHSVD+  +GDE RRG  RD R+P                 EYKKGLRP+LWLSPNF
Sbjct: 447 RPGRHSVDVV-RGDESRRGKERDYRRPAASSECGHRRKEGSKESEYKKGLRPVLWLSPNF 505

Query: 195 PLQTEELLPLLDFLANKVKAIRRLRQLLTTNLPPETFPVK 76
           PL+TEELLPLLD LANKVKAIRRLR LLTT LPP TFPVK
Sbjct: 506 PLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPGTFPVK 545


>ref|NP_001175171.1| Os07g0436000 [Oryza sativa Japonica Group]
           gi|255677719|dbj|BAH93899.1| Os07g0436000 [Oryza sativa
           Japonica Group]
          Length = 548

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/100 (67%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
 Frame = -2

Query: 369 RLGRHSVDIAEKGDELRRG--RDTRKPXXXXXXXXXXXXXXXXXEYKKGLRPILWLSPNF 196
           R GRHSVD+  +GDE RRG  RD R+P                 EYKKGLRP+LWLSPNF
Sbjct: 447 RPGRHSVDVV-RGDESRRGKERDYRRPAASSECGHRRKEGSKESEYKKGLRPVLWLSPNF 505

Query: 195 PLQTEELLPLLDFLANKVKAIRRLRQLLTTNLPPETFPVK 76
           PL+TEELLPLLD LANKVKAIRRLR LLTT LPP TFPVK
Sbjct: 506 PLRTEELLPLLDILANKVKAIRRLRDLLTTKLPPGTFPVK 545


Top