BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002956
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI...   310   1e-82
ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA liga...   300   1e-79
ref|XP_002329213.1| acyl:coa ligase acetate-coa synthetase-like ...   298   5e-79
emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]   297   1e-78
ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus comm...   289   3e-76

>ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 549

 Score =  310 bits (795), Expect = 1e-82
 Identities = 147/208 (70%), Positives = 178/208 (85%), Gaps = 4/208 (1%)
 Frame = +2

Query: 2   PLGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVIAPNIP 181
           PLGFL+RAATVY D  S++YNS TYTWSQT+RRCLQ+ASSI S GI  G+VVSV+APN+P
Sbjct: 16  PLGFLDRAATVYGDCPSVLYNSITYTWSQTHRRCLQVASSIKSFGIGRGHVVSVVAPNVP 75

Query: 182 AMYELHFAVPMSGAILNSINTRLDARTISILLRHSEAKLVFVDHFSRSLVLEALSLFPQE 361
           AMYELHFAVPMSGA+LN+INTRLDART+S+LLRHSE+KLVFVD  SR+L+LEALSLFP  
Sbjct: 76  AMYELHFAVPMSGAVLNTINTRLDARTVSVLLRHSESKLVFVDCLSRALILEALSLFPPN 135

Query: 362 SQFPILAFINTDAETPAADLD----YESLIEKGDAEFKWIQPQNEWTPIVLNYTSGTTSS 529
           +Q+P+L  I  +   P++ +D    YE L+E+GD EFKW++P++EW PI+LNYTSGTTSS
Sbjct: 136 TQWPLLVLIADEEVAPSSTVDFICTYEDLVERGDPEFKWVRPESEWDPIILNYTSGTTSS 195

Query: 530 PKGVVHSHRGEFIVALDSLIEWSVPKQP 613
           PKGVVH HRG FIV +DSL+EWSVPKQP
Sbjct: 196 PKGVVHCHRGIFIVTIDSLVEWSVPKQP 223


>ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
          Length = 588

 Score =  300 bits (768), Expect = 1e-79
 Identities = 142/207 (68%), Positives = 174/207 (84%), Gaps = 4/207 (1%)
 Frame = +2

Query: 5   LGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVIAPNIPA 184
           L FL+RAATVY D  S++YNSTTYTWSQT+ RCLQ+ASSI SLGI  G VVSV+APNIPA
Sbjct: 56  LSFLDRAATVYGDCPSVVYNSTTYTWSQTHHRCLQVASSIKSLGIGRGQVVSVVAPNIPA 115

Query: 185 MYELHFAVPMSGAILNSINTRLDARTISILLRHSEAKLVFVDHFSRSLVLEALSLFPQES 364
           MYELHFAVPM+GA+LN+INTRLDA+T+S+LLRHSE+KL+FVD+ SR L+LE+LSLFP  S
Sbjct: 116 MYELHFAVPMAGAVLNTINTRLDAKTVSVLLRHSESKLIFVDYQSRPLILESLSLFPPSS 175

Query: 365 QFPILAFINTDAETPAADLD----YESLIEKGDAEFKWIQPQNEWTPIVLNYTSGTTSSP 532
           Q P+L  I  D ++P + +D    YE ++ +GD EFKWI+P++EW P++LNYTSGTTSSP
Sbjct: 176 QRPLLVLITDDEDSPPSTVDFLCTYEDMVGRGDPEFKWIRPESEWNPMILNYTSGTTSSP 235

Query: 533 KGVVHSHRGEFIVALDSLIEWSVPKQP 613
           KGVVH HRG FIV +DSLI+W VPKQP
Sbjct: 236 KGVVHCHRGIFIVTVDSLIDWCVPKQP 262


>ref|XP_002329213.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
           trichocarpa] gi|222870994|gb|EEF08125.1| acyl:coa ligase
           acetate-coa synthetase-like protein [Populus
           trichocarpa]
          Length = 548

 Score =  298 bits (763), Expect = 5e-79
 Identities = 148/210 (70%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
 Frame = +2

Query: 2   PLGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVIAPNIP 181
           P+GFLERAATVY D  SIIYNSTTYTWSQTYRRCL++ASS+ S  IKPG VVSV+APN+P
Sbjct: 16  PIGFLERAATVYGDCPSIIYNSTTYTWSQTYRRCLKVASSLSSNVIKPGQVVSVVAPNVP 75

Query: 182 AMYELHFAVPMSGAILNSINTRLDARTISILLRHSEAKLVFVDHFSRSLVLEALSLFPQE 361
           AMYEL FAVPMSGAILN+INTRLDARTISILLRHSE+KLVFVD+ S  ++LEALSLFP E
Sbjct: 76  AMYELQFAVPMSGAILNNINTRLDARTISILLRHSESKLVFVDYLSLDVILEALSLFPPE 135

Query: 362 SQFPILAFINTDAE----TPAADLD---YESLIEKGDAEFKWIQPQNEWTPIVLNYTSGT 520
           +  P L  I  D E     P+  +D   YES++EKGD EFKW+QPQ+EW P+VLNYTSGT
Sbjct: 136 TPCPALVLITDDEEEAPPPPSLSVDFCTYESMVEKGDPEFKWVQPQSEWDPVVLNYTSGT 195

Query: 521 TSSPKGVVHSHRGEFIVALDSLIEWSVPKQ 610
           TS+PKGVV SHR  F + + SLI+WS+PKQ
Sbjct: 196 TSAPKGVVQSHRATFTITIGSLIDWSLPKQ 225


>emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]
          Length = 537

 Score =  297 bits (760), Expect = 1e-78
 Identities = 142/204 (69%), Positives = 171/204 (83%)
 Frame = +2

Query: 2   PLGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVIAPNIP 181
           PLGFL+RAATVY D  S++YNS TYTWSQT+RRCLQ+ASSI S GI  G+VVSV+APN+P
Sbjct: 16  PLGFLDRAATVYGDCPSVLYNSITYTWSQTHRRCLQVASSIKSFGIGRGHVVSVVAPNVP 75

Query: 182 AMYELHFAVPMSGAILNSINTRLDARTISILLRHSEAKLVFVDHFSRSLVLEALSLFPQE 361
           AMYELHFAVPMSGA+LN+INTRLDART+S+LLRHSE+KLVFVD  SR+L+LEALSLFP  
Sbjct: 76  AMYELHFAVPMSGAVLNTINTRLDARTVSVLLRHSESKLVFVDCLSRALILEALSLFPPN 135

Query: 362 SQFPILAFINTDAETPAADLDYESLIEKGDAEFKWIQPQNEWTPIVLNYTSGTTSSPKGV 541
           +Q+P+L  I  +   P++         +GD EFKW++P++EW PI+LNYTSGTTSSPKGV
Sbjct: 136 TQWPLLVLIADEEVAPSS--------TRGDPEFKWVRPESEWDPIILNYTSGTTSSPKGV 187

Query: 542 VHSHRGEFIVALDSLIEWSVPKQP 613
           VH HRG FIV +DSL+EWSVPKQP
Sbjct: 188 VHCHRGIFIVTIDSLVEWSVPKQP 211


>ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis]
           gi|223538956|gb|EEF40553.1| AMP dependent ligase,
           putative [Ricinus communis]
          Length = 556

 Score =  289 bits (739), Expect = 3e-76
 Identities = 140/215 (65%), Positives = 169/215 (78%), Gaps = 11/215 (5%)
 Frame = +2

Query: 2   PLGFLERAATVYADSNSIIYNSTTYTWSQTYRRCLQLASSIVSLGIKPGNVVSVIAPNIP 181
           PL FLERA+TVY D  SI+YN+ TYTWSQT+RRCLQLASS+ S G   G+VVSV+APN P
Sbjct: 16  PLSFLERASTVYGDCPSIVYNTATYTWSQTHRRCLQLASSLSSGGFTRGDVVSVVAPNTP 75

Query: 182 AMYELHFAVPMSGAILNSINTRLDARTISILLRHSEAKLVFVDHFSRSLVLEALSLFPQE 361
            MYEL FAVPMSGA+LN+INTRLDART+S+LLRHS++KLVFVD  SR LVLEA+SLFP  
Sbjct: 76  PMYELQFAVPMSGAVLNNINTRLDARTVSVLLRHSQSKLVFVDCLSRDLVLEAVSLFPSS 135

Query: 362 SQFPILAFINTDAETPAAD-----------LDYESLIEKGDAEFKWIQPQNEWTPIVLNY 508
            + P L  I  D E PA+              YES++EKGD EFKW+QPQ+EW P++LNY
Sbjct: 136 VKRPTLVLITDDDEAPASSSTSSSSTVDFCCTYESMVEKGDPEFKWVQPQSEWDPMILNY 195

Query: 509 TSGTTSSPKGVVHSHRGEFIVALDSLIEWSVPKQP 613
           TSGTTSSPKGVVH HRG +I+ ++SLI+W+VP+QP
Sbjct: 196 TSGTTSSPKGVVHCHRGIYIITVESLIDWNVPRQP 230