BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002955
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543608.1| PREDICTED: charged multivesicular body prote...   200   9e-50
ref|XP_002281282.1| PREDICTED: charged multivesicular body prote...   200   1e-49
ref|XP_003597636.1| Charged multivesicular body protein 1b [Medi...   197   6e-49
gb|AAO59435.1| putative developmental protein [Nicotiana bentham...   197   7e-49
ref|XP_004146833.1| PREDICTED: charged multivesicular body prote...   196   1e-48

>ref|XP_003543608.1| PREDICTED: charged multivesicular body protein 1-like isoform 1
           [Glycine max] gi|356550468|ref|XP_003543609.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 2 [Glycine max] gi|356550470|ref|XP_003543610.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 3 [Glycine max] gi|356556672|ref|XP_003546647.1|
           PREDICTED: charged multivesicular body protein 1-like
           [Glycine max]
          Length = 203

 Score =  200 bits (509), Expect = 9e-50
 Identities = 108/135 (80%), Positives = 112/135 (82%)
 Frame = -2

Query: 406 NTEKLMNQIMELKLTSKSLLRQSQKCAXXXXXXXXXXXXXXXKGNMDGARIYAENSIRKR 227
           NTEKLMNQIMELK TSKSL RQS+KC                KGNMDGARIYAEN+IRKR
Sbjct: 3   NTEKLMNQIMELKFTSKSLQRQSRKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIRKR 62

Query: 226 NEQMNYLRLASRLDAVVARLDTQAKMSTISKSMGSIVNSLESSLTTGNFQKMSETMDQFE 47
            EQMNYLRLASRLDAVVARLDTQAKM+TISKSMG+IV SLESSL TGN QKMSETMD FE
Sbjct: 63  TEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGNLQKMSETMDSFE 122

Query: 46  KQFVNMEVQAEFMES 2
           KQFVNMEVQAEFMES
Sbjct: 123 KQFVNMEVQAEFMES 137


>ref|XP_002281282.1| PREDICTED: charged multivesicular body protein 1 [Vitis vinifera]
           gi|147855645|emb|CAN79153.1| hypothetical protein
           VITISV_016190 [Vitis vinifera]
          Length = 202

 Score =  200 bits (508), Expect = 1e-49
 Identities = 107/135 (79%), Positives = 113/135 (83%)
 Frame = -2

Query: 406 NTEKLMNQIMELKLTSKSLLRQSQKCAXXXXXXXXXXXXXXXKGNMDGARIYAENSIRKR 227
           NTEKLMNQIMELK TSKSL RQ++KC                KGNMDGARIYAEN+IRKR
Sbjct: 3   NTEKLMNQIMELKFTSKSLQRQARKCEKEEKGEKLKVKKAIEKGNMDGARIYAENAIRKR 62

Query: 226 NEQMNYLRLASRLDAVVARLDTQAKMSTISKSMGSIVNSLESSLTTGNFQKMSETMDQFE 47
            EQMNYLRL+SRLDAVVARLDTQAKM+TISKSMGSIV SLES+L TGN QKMSETMDQFE
Sbjct: 63  TEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGSIVKSLESTLATGNLQKMSETMDQFE 122

Query: 46  KQFVNMEVQAEFMES 2
           KQFVNMEVQAEFMES
Sbjct: 123 KQFVNMEVQAEFMES 137


>ref|XP_003597636.1| Charged multivesicular body protein 1b [Medicago truncatula]
           gi|217071954|gb|ACJ84337.1| unknown [Medicago
           truncatula] gi|355486684|gb|AES67887.1| Charged
           multivesicular body protein 1b [Medicago truncatula]
           gi|388522825|gb|AFK49474.1| unknown [Medicago
           truncatula]
          Length = 205

 Score =  197 bits (502), Expect = 6e-49
 Identities = 106/135 (78%), Positives = 112/135 (82%)
 Frame = -2

Query: 406 NTEKLMNQIMELKLTSKSLLRQSQKCAXXXXXXXXXXXXXXXKGNMDGARIYAENSIRKR 227
           NTEKL+NQIMELK TSKSL RQ++KC                KGNMDGARIYAEN+IRKR
Sbjct: 3   NTEKLLNQIMELKFTSKSLQRQARKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIRKR 62

Query: 226 NEQMNYLRLASRLDAVVARLDTQAKMSTISKSMGSIVNSLESSLTTGNFQKMSETMDQFE 47
            EQMNYLRL+SRLDAV ARLDTQAKMSTISKSMG+IV SLESSL TGN QKMSETMDQFE
Sbjct: 63  TEQMNYLRLSSRLDAVSARLDTQAKMSTISKSMGNIVKSLESSLATGNLQKMSETMDQFE 122

Query: 46  KQFVNMEVQAEFMES 2
           KQFVNMEVQAEFMES
Sbjct: 123 KQFVNMEVQAEFMES 137


>gb|AAO59435.1| putative developmental protein [Nicotiana benthamiana]
          Length = 203

 Score =  197 bits (501), Expect = 7e-49
 Identities = 105/135 (77%), Positives = 114/135 (84%)
 Frame = -2

Query: 406 NTEKLMNQIMELKLTSKSLLRQSQKCAXXXXXXXXXXXXXXXKGNMDGARIYAENSIRKR 227
           NTEKLMNQIMELK TSKSL RQ++KC                KGNMDGARIYAEN+IRKR
Sbjct: 3   NTEKLMNQIMELKFTSKSLQRQARKCEKDEKSEKLKVKKAIEKGNMDGARIYAENAIRKR 62

Query: 226 NEQMNYLRLASRLDAVVARLDTQAKMSTISKSMGSIVNSLESSLTTGNFQKMSETMDQFE 47
           +EQMNYLRL+SRLDAVVARLDTQAKM+TISKSMG+IV SLESSL TGN QKMSETMD+FE
Sbjct: 63  SEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGNLQKMSETMDKFE 122

Query: 46  KQFVNMEVQAEFMES 2
           +QFVNMEVQAEFMES
Sbjct: 123 QQFVNMEVQAEFMES 137


>ref|XP_004146833.1| PREDICTED: charged multivesicular body protein 1-like [Cucumis
           sativus] gi|449476685|ref|XP_004154806.1| PREDICTED:
           charged multivesicular body protein 1-like [Cucumis
           sativus]
          Length = 203

 Score =  196 bits (499), Expect = 1e-48
 Identities = 104/135 (77%), Positives = 113/135 (83%)
 Frame = -2

Query: 406 NTEKLMNQIMELKLTSKSLLRQSQKCAXXXXXXXXXXXXXXXKGNMDGARIYAENSIRKR 227
           NTEKL+NQIMELK T+KSL RQ++KC                KGNMDGARIYAEN+IRKR
Sbjct: 3   NTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKR 62

Query: 226 NEQMNYLRLASRLDAVVARLDTQAKMSTISKSMGSIVNSLESSLTTGNFQKMSETMDQFE 47
            EQMNYLRL+SRLDAVVARLDTQAKMSTI+KSMGSIV SLES+L TGN QKMSETMDQFE
Sbjct: 63  TEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQFE 122

Query: 46  KQFVNMEVQAEFMES 2
           KQFVNMEVQAEFME+
Sbjct: 123 KQFVNMEVQAEFMEN 137