BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002930
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18243.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus...   174   5e-42
ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [C...   174   7e-42
emb|CBI28706.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_002282412.1| PREDICTED: 40S ribosomal protein S18-like [V...   174   7e-42

>emb|CBI18243.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/100 (85%), Positives = 92/100 (92%)
 Frame = +1

Query: 28  IFSNLCNKMSLIANEDFQHILRVLNTNVDGKKKIMFALTSIKGIGRRLANIACKKADVDM 207
           + S   + MSL+ANE+FQHILRVLNTNVDGK+KIMFALTSIKGIGRR ANI CKKADVDM
Sbjct: 35  VTSIFASTMSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDM 94

Query: 208 NKRAGELTAAELENIMVIVANPRQFNIPDWFLNRKKDYKD 327
           NKRAGEL+AAELEN+MVIVANPRQF IPDWFLNRKKDYKD
Sbjct: 95  NKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKKDYKD 134


>ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis]
           gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18,
           putative [Ricinus communis]
          Length = 152

 Score =  174 bits (442), Expect = 5e-42
 Identities = 84/92 (91%), Positives = 89/92 (96%)
 Frame = +1

Query: 52  MSLIANEDFQHILRVLNTNVDGKKKIMFALTSIKGIGRRLANIACKKADVDMNKRAGELT 231
           MSL+ANEDFQHILRVLNTNVDGK+KIMFALTSIKGIGRR ANI CKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 232 AAELENIMVIVANPRQFNIPDWFLNRKKDYKD 327
           AAEL+N+MVIVANPRQF IPDWFLNR+KDYKD
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKD 92


>ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
           gi|449525091|ref|XP_004169553.1| PREDICTED: 40S
           ribosomal protein S18-like [Cucumis sativus]
          Length = 152

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/92 (90%), Positives = 89/92 (96%)
 Frame = +1

Query: 52  MSLIANEDFQHILRVLNTNVDGKKKIMFALTSIKGIGRRLANIACKKADVDMNKRAGELT 231
           MSL+ANEDFQHILRVLNTNVDGK+KIMFALTSIKGIGRR ANI CKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 232 AAELENIMVIVANPRQFNIPDWFLNRKKDYKD 327
           AAEL+N+MV+VANPRQF IPDWFLNR+KDYKD
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKD 92


>emb|CBI28706.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/92 (91%), Positives = 89/92 (96%)
 Frame = +1

Query: 52   MSLIANEDFQHILRVLNTNVDGKKKIMFALTSIKGIGRRLANIACKKADVDMNKRAGELT 231
            MSL+ANE+FQHILRVLNTNVDGK+KIMFALTSIKGIGRR ANI CKKADVDMNKRAGEL+
Sbjct: 761  MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS 820

Query: 232  AAELENIMVIVANPRQFNIPDWFLNRKKDYKD 327
            AAELEN+MVIVANPRQF IPDWFLNRKKDYKD
Sbjct: 821  AAELENLMVIVANPRQFKIPDWFLNRKKDYKD 852


>ref|XP_002282412.1| PREDICTED: 40S ribosomal protein S18-like [Vitis vinifera]
           gi|225460586|ref|XP_002262702.1| PREDICTED: 40S
           ribosomal protein S18-like [Vitis vinifera]
           gi|359479621|ref|XP_003632303.1| PREDICTED: 40S
           ribosomal protein S18-like [Vitis vinifera]
          Length = 152

 Score =  174 bits (441), Expect = 7e-42
 Identities = 84/92 (91%), Positives = 89/92 (96%)
 Frame = +1

Query: 52  MSLIANEDFQHILRVLNTNVDGKKKIMFALTSIKGIGRRLANIACKKADVDMNKRAGELT 231
           MSL+ANE+FQHILRVLNTNVDGK+KIMFALTSIKGIGRR ANI CKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS 60

Query: 232 AAELENIMVIVANPRQFNIPDWFLNRKKDYKD 327
           AAELEN+MVIVANPRQF IPDWFLNRKKDYKD
Sbjct: 61  AAELENLMVIVANPRQFKIPDWFLNRKKDYKD 92