BLASTX nr result

ID: Coptis25_contig00002929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002929
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT ...   307   2e-81
emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]   307   2e-81
ref|XP_002520923.1| Protein SENSITIVITY TO RED LIGHT REDUCED, pu...   293   3e-77
emb|CBI24338.3| unnamed protein product [Vitis vinifera]              286   6e-75
ref|XP_004143755.1| PREDICTED: protein SENSITIVITY TO RED LIGHT ...   285   1e-74

>ref|XP_002271597.1| PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1 [Vitis
           vinifera]
          Length = 269

 Score =  307 bits (787), Expect = 2e-81
 Identities = 144/213 (67%), Positives = 175/213 (82%)
 Frame = -1

Query: 936 VERESKLMQKMHMCIRKLENSDFYTTFLDQMETVEVLTYFLRILGSETKMQMVIYGIGSV 757
           + RESKLMQK+ +CIRKL NS FY   LDQ++T  +L  FLR+LGSE KMQMV+YGIGS+
Sbjct: 55  LHRESKLMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLRVLGSELKMQMVVYGIGSI 114

Query: 756 ESYDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTTETNALEALGCTVLKVNEQGRKQAV 577
           ESY+ PRLQLS AIL+KRKF WIGDI+VFDP+LS TE+  LEALGC+VL VNEQGR+QA 
Sbjct: 115 ESYEPPRLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQAS 174

Query: 576 KPTMFFMPHCEVVLYDNLLHANWRSENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFV 397
           KPT+FFMPHCE  LYDNLL  NWR+E +N +VLFGNSF  YEQ+VSEF++S +VDS+R +
Sbjct: 175 KPTLFFMPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHI 234

Query: 396 LGVRRFSVEIGVDVVSDEFFRAFHDSSWHFFKL 298
           L VR+F+ E  +  VSD++F AFHDSSWHFF L
Sbjct: 235 LAVRKFTREFAIKTVSDDYFGAFHDSSWHFFSL 267


>emb|CAN76600.1| hypothetical protein VITISV_012927 [Vitis vinifera]
          Length = 269

 Score =  307 bits (787), Expect = 2e-81
 Identities = 144/213 (67%), Positives = 175/213 (82%)
 Frame = -1

Query: 936 VERESKLMQKMHMCIRKLENSDFYTTFLDQMETVEVLTYFLRILGSETKMQMVIYGIGSV 757
           + RESKLMQK+ +CIRKL NS FY   LDQ++T  +L  FLR+LGSE KMQMV+YGIGS+
Sbjct: 55  LHRESKLMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLRVLGSELKMQMVVYGIGSI 114

Query: 756 ESYDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTTETNALEALGCTVLKVNEQGRKQAV 577
           ESY+ PRLQLS AIL+KRKF WIGDI+VFDP+LS TE+  LEALGC+VL VNEQGR+QA 
Sbjct: 115 ESYEPPRLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQAS 174

Query: 576 KPTMFFMPHCEVVLYDNLLHANWRSENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFV 397
           KPT+FFMPHCE  LYDNLL  NWR+E +N +VLFGNSF  YEQ+VSEF++S +VDS+R +
Sbjct: 175 KPTLFFMPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHI 234

Query: 396 LGVRRFSVEIGVDVVSDEFFRAFHDSSWHFFKL 298
           L VR+F+ E  +  VSD++F AFHDSSWHFF L
Sbjct: 235 LAVRKFTREFAIKTVSDDYFGAFHDSSWHFFSL 267


>ref|XP_002520923.1| Protein SENSITIVITY TO RED LIGHT REDUCED, putative [Ricinus
           communis] gi|223539889|gb|EEF41468.1| Protein
           SENSITIVITY TO RED LIGHT REDUCED, putative [Ricinus
           communis]
          Length = 276

 Score =  293 bits (751), Expect = 3e-77
 Identities = 140/222 (63%), Positives = 180/222 (81%), Gaps = 1/222 (0%)
 Frame = -1

Query: 930 RESKLMQKMHMCIRKLENSDFYTTFLDQMETVEVLTYFLRILGSETKMQMVIYGIGSVES 751
           R+SKL++KM++C++K+ENS FY T L+Q++T E L  F ++LGSE KMQMVIYGIGS+ES
Sbjct: 56  RQSKLIEKMNICMKKVENSQFYQTLLEQIQTPESLDSFHKVLGSELKMQMVIYGIGSIES 115

Query: 750 YDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTTETNALEALGCTVLKVNEQGRKQAVKP 571
           Y+ PR+QLS AIL+K++F WIGDIEVFDPVLS TE+  LEALGC+VL VNE GR+   +P
Sbjct: 116 YETPRIQLSVAILMKKEFSWIGDIEVFDPVLSATESRVLEALGCSVLSVNEHGRRCVTRP 175

Query: 570 TMFFMPHCEVVLYDNLLHANWRSENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFVLG 391
           T+F+MPHCE  LY+NLL ANWR E LN++ LFGNSFE Y QY+SEF+NS IVDS+R ++ 
Sbjct: 176 TLFYMPHCEAELYNNLLQANWRVELLNRIALFGNSFEVY-QYLSEFRNSTIVDSSRHIVA 234

Query: 390 VRRFSVEIGVDVVSDEFFRAFHDSSWHFFKLDPQMELE-FEN 268
           VR F+ E  +  VSD++F AFHDSSWHFF  DP+ EL+ F+N
Sbjct: 235 VREFTHEYVIKTVSDDYFAAFHDSSWHFFSPDPKTELQLFKN 276


>emb|CBI24338.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  286 bits (731), Expect = 6e-75
 Identities = 137/213 (64%), Positives = 167/213 (78%)
 Frame = -1

Query: 936 VERESKLMQKMHMCIRKLENSDFYTTFLDQMETVEVLTYFLRILGSETKMQMVIYGIGSV 757
           + RESKLMQK+ +CIRKL NS FY   LDQ++T  +L  FLR         MV+YGIGS+
Sbjct: 55  LHRESKLMQKIQICIRKLGNSTFYHVLLDQVQTPHMLEAFLR---------MVVYGIGSI 105

Query: 756 ESYDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTTETNALEALGCTVLKVNEQGRKQAV 577
           ESY+ PRLQLS AIL+KRKF WIGDI+VFDP+LS TE+  LEALGC+VL VNEQGR+QA 
Sbjct: 106 ESYEPPRLQLSLAILLKRKFSWIGDIKVFDPILSATESRVLEALGCSVLSVNEQGRRQAS 165

Query: 576 KPTMFFMPHCEVVLYDNLLHANWRSENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFV 397
           KPT+FFMPHCE  LYDNLL  NWR+E +N +VLFGNSF  YEQ+VSEF++S +VDS+R +
Sbjct: 166 KPTLFFMPHCEAELYDNLLQENWRTERMNNIVLFGNSFGTYEQHVSEFRSSTLVDSSRHI 225

Query: 396 LGVRRFSVEIGVDVVSDEFFRAFHDSSWHFFKL 298
           L VR+F+ E  +  VSD++F AFHDSSWHFF L
Sbjct: 226 LAVRKFTREFAIKTVSDDYFGAFHDSSWHFFSL 258


>ref|XP_004143755.1| PREDICTED: protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucumis
           sativus] gi|449518749|ref|XP_004166398.1| PREDICTED:
           protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucumis
           sativus]
          Length = 277

 Score =  285 bits (728), Expect = 1e-74
 Identities = 135/222 (60%), Positives = 172/222 (77%)
 Frame = -1

Query: 930 RESKLMQKMHMCIRKLENSDFYTTFLDQMETVEVLTYFLRILGSETKMQMVIYGIGSVES 751
           RESKL+QKM +CI+KLENS FY T ++++ET+  L    R+LGSE+KM MV+YG+GS+E+
Sbjct: 56  RESKLLQKMEICIKKLENSQFYQTLVEELETMPFLESLNRVLGSESKMGMVVYGVGSIEN 115

Query: 750 YDCPRLQLSFAILIKRKFDWIGDIEVFDPVLSTTETNALEALGCTVLKVNEQGRKQAVKP 571
           Y+ PRLQLS AIL+KRKF WI  +EVFDP+LS TE   +E+ GC+VL  NEQGR+ A KP
Sbjct: 116 YENPRLQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSFNEQGRRCAEKP 175

Query: 570 TMFFMPHCEVVLYDNLLHANWRSENLNQMVLFGNSFEKYEQYVSEFKNSVIVDSARFVLG 391
           TMFFMPHCE  LY+NLL  NW+   LN +VLFGNSFE YEQ+VSEFKNS +VDS++F+L 
Sbjct: 176 TMFFMPHCEAELYNNLLQENWKVGLLNHIVLFGNSFEIYEQFVSEFKNSPVVDSSKFILA 235

Query: 390 VRRFSVEIGVDVVSDEFFRAFHDSSWHFFKLDPQMELEFENL 265
            R+F  EI +  VSD++F AFHDSSW FF     +EL+F +L
Sbjct: 236 SRKFIREIKIKTVSDDYFGAFHDSSWQFFSPVSPLELQFIDL 277


Top