BLASTX nr result
ID: Coptis25_contig00002918
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00002918
(4101 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003624755.1| Cysteine synthase [Medicago truncatula] gi|3... 209 2e-71
ref|XP_003521872.1| PREDICTED: probable cysteine synthase, chlor... 217 5e-61
ref|XP_003554060.1| PREDICTED: probable cysteine synthase, chlor... 217 7e-61
ref|XP_003554061.1| PREDICTED: probable cysteine synthase, chlor... 217 7e-61
ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chlor... 218 1e-60
>ref|XP_003624755.1| Cysteine synthase [Medicago truncatula] gi|355499770|gb|AES80973.1|
Cysteine synthase [Medicago truncatula]
Length = 368
Score = 209 bits (531), Expect(4) = 2e-71
Identities = 106/151 (70%), Positives = 123/151 (81%)
Frame = -1
Query: 1185 RVARLDSVISPQNVAFHGREELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLES 1006
R + +S ++ RE L+ V+IAEDVTQLIG T MIYL KV GCVANVAAKLES
Sbjct: 39 RTIAATATVSTPSLFSTTREGLDAVNIAEDVTQLIGNTPMIYLNKVTDGCVANVAAKLES 98
Query: 1005 MEPCRSAKDRIGLSMIADAEENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMP 826
MEPCRS KDRIG SM+ADAEE+ ISPGKT+ VEPTTGNTG+G+AFVAATK YKLIVTMP
Sbjct: 99 MEPCRSVKDRIGYSMLADAEESGAISPGKTVLVEPTTGNTGLGLAFVAATKGYKLIVTMP 158
Query: 825 ASINLERRLLLRAFGAEIILTDPAKGLKGAV 733
AS+N+ERR+LLR FGAE++LT+ KGLKGAV
Sbjct: 159 ASVNIERRILLRTFGAEVVLTNAEKGLKGAV 189
Score = 49.3 bits (116), Expect(4) = 2e-71
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = -2
Query: 731 VDKTKEITHGTPNAYLFQQFDNRANTKV 648
VDK +EI +GTPNAY+F+QFDNR NTK+
Sbjct: 189 VDKAEEIVYGTPNAYMFRQFDNRNNTKI 216
Score = 48.1 bits (113), Expect(4) = 2e-71
Identities = 25/31 (80%), Positives = 29/31 (93%), Gaps = 2/31 (6%)
Frame = -3
Query: 433 GFIPSILNVKLLDEVVKVT--EAVDMARRLA 347
GFIPSIL++KLLDEVVKVT EA++MARRLA
Sbjct: 279 GFIPSILDIKLLDEVVKVTNVEAIEMARRLA 309
Score = 35.0 bits (79), Expect(4) = 2e-71
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1
Query: 543 VFKDTMTSVDIFVAAIXXXXXXXXXXGYLKMMNKDIK 433
+++DTM +VD+ VAAI YLK+MNK IK
Sbjct: 225 IWEDTMGNVDLLVAAIGTGGTITGTGQYLKLMNKKIK 261
>ref|XP_003521872.1| PREDICTED: probable cysteine synthase, chloroplastic-like [Glycine
max]
Length = 372
Score = 217 bits (552), Expect(2) = 5e-61
Identities = 127/238 (53%), Positives = 151/238 (63%)
Frame = -1
Query: 1146 VAFHGREELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLESMEPCRSAKDRIGL 967
+ + R+ +TV+IAEDVTQLIG T M+YL KV GCVAN+AAKLESMEPCRS KDRIG
Sbjct: 56 LVYSTRQGFDTVNIAEDVTQLIGNTPMVYLNKVTEGCVANIAAKLESMEPCRSVKDRIGY 115
Query: 966 SMIADAEENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMPASINLERRLLLRA 787
SM++DAEE ISPGKTI VEPTTGNTG+GIAFVAATK YKLIVTMPAS+N+ERR+LLRA
Sbjct: 116 SMLSDAEEIGAISPGKTILVEPTTGNTGLGIAFVAATKGYKLIVTMPASVNVERRILLRA 175
Query: 786 FGAEIILTDPAKGLKGAVR**D*RNYSWNTKCIPVSTV*QSGKYKGCALSPCSAFALSLT 607
FGAE+ILTD KGLKGAV K + S +A+
Sbjct: 176 FGAEVILTDAEKGLKGAV-----------------------DKAEEIVHSTNNAYMFRQF 212
Query: 606 PFSIVVGVQFLSLLTF*RFLNVFKDTMTSVDIFVAAIXXXXXXXXXXGYLKMMNKDIK 433
+ F + +++DTM +VDI VA I YLKMMNK+IK
Sbjct: 213 DNMTNTKIHFETTGP-----EIWEDTMGNVDILVAGIGTGGTVTGTGQYLKMMNKNIK 265
Score = 47.4 bits (111), Expect(2) = 5e-61
Identities = 25/31 (80%), Positives = 29/31 (93%), Gaps = 2/31 (6%)
Frame = -3
Query: 433 GFIPSILNVKLLDEVVKVT--EAVDMARRLA 347
GF+PSIL+VKLLDEV+KVT EAV+MARRLA
Sbjct: 283 GFMPSILDVKLLDEVIKVTNVEAVEMARRLA 313
>ref|XP_003554060.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 1
[Glycine max]
Length = 381
Score = 217 bits (552), Expect(2) = 7e-61
Identities = 126/243 (51%), Positives = 153/243 (62%)
Frame = -1
Query: 1161 ISPQNVAFHGREELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLESMEPCRSAK 982
+S + + R+ +TV+IAEDVTQLIG T M+YL KV GCVAN+AAKLESMEPCRS K
Sbjct: 50 VSSAPLVYSTRQGFDTVNIAEDVTQLIGNTPMVYLNKVTEGCVANIAAKLESMEPCRSVK 109
Query: 981 DRIGLSMIADAEENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMPASINLERR 802
DRIG SM++DAEE ISPGKTI VEPTTGNTG+GIAFVAATK YKLIVTMPASIN+ERR
Sbjct: 110 DRIGYSMLSDAEEIGAISPGKTILVEPTTGNTGLGIAFVAATKGYKLIVTMPASINVERR 169
Query: 801 LLLRAFGAEIILTDPAKGLKGAVR**D*RNYSWNTKCIPVSTV*QSGKYKGCALSPCSAF 622
+LLRAFGAE++LTD KGLKGAV K + + +A+
Sbjct: 170 ILLRAFGAEVVLTDAEKGLKGAV-----------------------DKAEEIVRNTPNAY 206
Query: 621 ALSLTPFSIVVGVQFLSLLTF*RFLNVFKDTMTSVDIFVAAIXXXXXXXXXXGYLKMMNK 442
+ F + +++DTM +VD+ VA I YLKMMNK
Sbjct: 207 MFRQFDNMTNTKIHFETTGP-----EIWEDTMGNVDVLVAGIGTGGTVTGTGRYLKMMNK 261
Query: 441 DIK 433
+IK
Sbjct: 262 NIK 264
Score = 47.0 bits (110), Expect(2) = 7e-61
Identities = 24/31 (77%), Positives = 29/31 (93%), Gaps = 2/31 (6%)
Frame = -3
Query: 433 GFIPSILNVKLLDEVVKVT--EAVDMARRLA 347
GF+PSIL++KLLDEV+KVT EAV+MARRLA
Sbjct: 292 GFMPSILDIKLLDEVIKVTNVEAVEMARRLA 322
>ref|XP_003554061.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 2
[Glycine max]
Length = 371
Score = 217 bits (552), Expect(2) = 7e-61
Identities = 126/243 (51%), Positives = 153/243 (62%)
Frame = -1
Query: 1161 ISPQNVAFHGREELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLESMEPCRSAK 982
+S + + R+ +TV+IAEDVTQLIG T M+YL KV GCVAN+AAKLESMEPCRS K
Sbjct: 50 VSSAPLVYSTRQGFDTVNIAEDVTQLIGNTPMVYLNKVTEGCVANIAAKLESMEPCRSVK 109
Query: 981 DRIGLSMIADAEENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMPASINLERR 802
DRIG SM++DAEE ISPGKTI VEPTTGNTG+GIAFVAATK YKLIVTMPASIN+ERR
Sbjct: 110 DRIGYSMLSDAEEIGAISPGKTILVEPTTGNTGLGIAFVAATKGYKLIVTMPASINVERR 169
Query: 801 LLLRAFGAEIILTDPAKGLKGAVR**D*RNYSWNTKCIPVSTV*QSGKYKGCALSPCSAF 622
+LLRAFGAE++LTD KGLKGAV K + + +A+
Sbjct: 170 ILLRAFGAEVVLTDAEKGLKGAV-----------------------DKAEEIVRNTPNAY 206
Query: 621 ALSLTPFSIVVGVQFLSLLTF*RFLNVFKDTMTSVDIFVAAIXXXXXXXXXXGYLKMMNK 442
+ F + +++DTM +VD+ VA I YLKMMNK
Sbjct: 207 MFRQFDNMTNTKIHFETTGP-----EIWEDTMGNVDVLVAGIGTGGTVTGTGRYLKMMNK 261
Query: 441 DIK 433
+IK
Sbjct: 262 NIK 264
Score = 47.0 bits (110), Expect(2) = 7e-61
Identities = 24/31 (77%), Positives = 29/31 (93%), Gaps = 2/31 (6%)
Frame = -3
Query: 433 GFIPSILNVKLLDEVVKVT--EAVDMARRLA 347
GF+PSIL++KLLDEV+KVT EAV+MARRLA
Sbjct: 282 GFMPSILDIKLLDEVIKVTNVEAVEMARRLA 312
>ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chloroplastic-like [Vitis
vinifera] gi|296085861|emb|CBI31185.3| unnamed protein
product [Vitis vinifera]
Length = 390
Score = 218 bits (555), Expect(2) = 1e-60
Identities = 126/232 (54%), Positives = 151/232 (65%)
Frame = -1
Query: 1128 EELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLESMEPCRSAKDRIGLSMIADA 949
E++ TV+IA+DVTQLIGRT MIYL KV GCVAN+AAKLESMEPCRS KDRIG SMI+DA
Sbjct: 77 EDIHTVNIADDVTQLIGRTPMIYLNKVTQGCVANIAAKLESMEPCRSVKDRIGYSMISDA 136
Query: 948 EENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMPASINLERRLLLRAFGAEII 769
EE ISPG++I VEPT+GNTG+GIAFVAATK YKLIVTMPASI++ERR+LLRAFGAEI+
Sbjct: 137 EETGAISPGRSILVEPTSGNTGLGIAFVAATKGYKLIVTMPASIDIERRILLRAFGAEIV 196
Query: 768 LTDPAKGLKGAVR**D*RNYSWNTKCIPVSTV*QSGKYKGCALSPCSAFALSLTPFSIVV 589
LTDP KG+KGAV K + S +A+
Sbjct: 197 LTDPMKGIKGAV-----------------------DKAEEIVQSMPNAYMFQQFDNMANA 233
Query: 588 GVQFLSLLTF*RFLNVFKDTMTSVDIFVAAIXXXXXXXXXXGYLKMMNKDIK 433
+ F + +++DT+ SVDIFVA I YLKMM +DIK
Sbjct: 234 KIHFETTGP-----EIWEDTVGSVDIFVAGIGTGGTVTGTGRYLKMMKRDIK 280
Score = 45.1 bits (105), Expect(2) = 1e-60
Identities = 23/31 (74%), Positives = 29/31 (93%), Gaps = 2/31 (6%)
Frame = -3
Query: 433 GFIPSILNVKLLDEVVKVT--EAVDMARRLA 347
G++PSIL+VKLLDEV+KVT EAV+MAR+LA
Sbjct: 298 GYVPSILDVKLLDEVLKVTNDEAVEMARKLA 328